RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 ZCRB1Q8TBF4 217 aaKnown RBP21.13■□□□□ 0.97
PCCB-218ENST00000490504 MEGF6O75095 1541 aa21.12■□□□□ 0.97
PCCB-218ENST00000490504 TNNT2P45379 298 aaPredicted RBP21.12■□□□□ 0.97
PCCB-218ENST00000490504 POLKQ9UBT6 870 aa21.12■□□□□ 0.97
PCCB-218ENST00000490504 RREB1Q92766 1687 aa21.12■□□□□ 0.97
PCCB-218ENST00000490504 PER1O15534 1290 aaPredicted RBP21.11■□□□□ 0.97
PCCB-218ENST00000490504 FAM208AQ9UK61 1670 aaKnown RBP21.11■□□□□ 0.97
PCCB-218ENST00000490504 TXNRD1Q16881 649 aa21.11■□□□□ 0.97
PCCB-218ENST00000490504 RALBP1Q15311 655 aa21.1■□□□□ 0.97
PCCB-218ENST00000490504 RAPGEF4Q8WZA2 1011 aa21.1■□□□□ 0.97
PCCB-218ENST00000490504 ANO8Q9HCE9 1232 aaPredicted RBP21.1■□□□□ 0.97
PCCB-218ENST00000490504 NUP188Q5SRE5 1749 aa21.1■□□□□ 0.97
PCCB-218ENST00000490504 TATP17735 454 aaPredicted RBP21.07■□□□□ 0.96
PCCB-218ENST00000490504 RGPD2P0DJD1 1756 aa21.07■□□□□ 0.96
PCCB-218ENST00000490504 MRS2Q9HD23 443 aa21.07■□□□□ 0.96
PCCB-218ENST00000490504 CNGB1Q14028 1251 aaPredicted RBP21.06■□□□□ 0.96
PCCB-218ENST00000490504 CCDC184Q52MB2 194 aa21.06■□□□□ 0.96
PCCB-218ENST00000490504 PRIM1P49642 420 aaKnown RBP21.05■□□□□ 0.96
PCCB-218ENST00000490504 NHSQ6T4R5 1651 aa21.05■□□□□ 0.96
PCCB-218ENST00000490504 SYTL4Q96C24 671 aaPredicted RBP21.04■□□□□ 0.96
PCCB-218ENST00000490504 EYA1Q99502 592 aa21.04■□□□□ 0.96
PCCB-218ENST00000490504 KNSTRNQ9Y448 316 aa21.04■□□□□ 0.96
PCCB-218ENST00000490504 MYBBP1AQ9BQG0 1328 aaKnown RBP21.04■□□□□ 0.96
PCCB-218ENST00000490504 RGPD3A6NKT7 1758 aaPredicted RBP21.04■□□□□ 0.96
PCCB-218ENST00000490504 RGPD4Q7Z3J3 1758 aa21.04■□□□□ 0.96
PCCB-218ENST00000490504 MORC1Q86VD1 984 aa21.04■□□□□ 0.96
PCCB-218ENST00000490504 NSD2O96028 1365 aa21.03■□□□□ 0.96
PCCB-218ENST00000490504 LRP5O75197 1615 aa21.03■□□□□ 0.96
PCCB-218ENST00000490504 EIF4A2Q14240 407 aaKnown RBP21.02■□□□□ 0.96
PCCB-218ENST00000490504 NCAPD2Q15021 1401 aa21■□□□□ 0.95
PCCB-218ENST00000490504 AMER1Q5JTC6 1135 aaPredicted RBP21■□□□□ 0.95
PCCB-218ENST00000490504 PDGFDQ9GZP0 370 aaPredicted RBP21■□□□□ 0.95
PCCB-218ENST00000490504 STK32BQ9NY57 414 aa21■□□□□ 0.95
PCCB-218ENST00000490504 CYP27B1O15528 508 aa21■□□□□ 0.95
PCCB-218ENST00000490504 SLC15A2Q16348 729 aa21■□□□□ 0.95
PCCB-218ENST00000490504 LRRC4BQ9NT99 713 aa21■□□□□ 0.95
PCCB-218ENST00000490504 NPC1L1Q9UHC9 1359 aa20.99■□□□□ 0.95
PCCB-218ENST00000490504 PCDH11XQ9BZA7 1347 aa20.99■□□□□ 0.95
PCCB-218ENST00000490504 PCDH11YQ9BZA8 1340 aa20.99■□□□□ 0.95
PCCB-218ENST00000490504 ANKRD26Q9UPS8 1709 aa20.99■□□□□ 0.95
PCCB-218ENST00000490504 SHANK3Q9BYB0 1731 aa20.98■□□□□ 0.95
PCCB-218ENST00000490504 CC2D1BQ5T0F9 858 aaKnown RBP20.97■□□□□ 0.95
PCCB-218ENST00000490504 BTAF1O14981 1849 aa20.96■□□□□ 0.95
PCCB-218ENST00000490504 MAP2P11137 1827 aaKnown RBP20.96■□□□□ 0.95
PCCB-218ENST00000490504 SPON1Q9HCB6 807 aa20.96■□□□□ 0.95
PCCB-218ENST00000490504 KCNQ4P56696 695 aa20.95■□□□□ 0.94
PCCB-218ENST00000490504 SLC27A3Q5K4L6 730 aa20.94■□□□□ 0.94
PCCB-218ENST00000490504 FAM9BQ8IZU0 186 aa20.94■□□□□ 0.94
PCCB-218ENST00000490504 SPG7Q9UQ90 795 aa20.94■□□□□ 0.94
PCCB-218ENST00000490504 ZNF827Q17R98 1081 aa20.93■□□□□ 0.94
PCCB-218ENST00000490504 IGSF1Q8N6C5 1336 aa20.93■□□□□ 0.94
PCCB-218ENST00000490504 ZBTB7AO95365 584 aa20.93■□□□□ 0.94
PCCB-218ENST00000490504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.93■□□□□ 0.94
PCCB-218ENST00000490504 KAT6BQ8WYB5 2073 aa20.92■□□□□ 0.94
PCCB-218ENST00000490504 DOT1LQ8TEK3 1739 aa20.92■□□□□ 0.94
PCCB-218ENST00000490504 NKX1-1Q15270 411 aaPredicted RBP20.92■□□□□ 0.94
PCCB-218ENST00000490504 MPRIPQ6WCQ1 1025 aa20.91■□□□□ 0.94
PCCB-218ENST00000490504 HNRNPUQ00839 825 aaKnown RBP eCLIP20.9■□□□□ 0.94
PCCB-218ENST00000490504 AKT1S1Q96B36 256 aa20.9■□□□□ 0.94
PCCB-218ENST00000490504 ATF5Q9Y2D1 282 aaPredicted RBP20.89■□□□□ 0.94
PCCB-218ENST00000490504 PAPPAQ13219 1627 aa20.89■□□□□ 0.93
PCCB-218ENST00000490504 PNISRQ8TF01 805 aaKnown RBP20.89■□□□□ 0.93
PCCB-218ENST00000490504 CCNL1Q9UK58 526 aaPredicted RBP20.89■□□□□ 0.93
PCCB-218ENST00000490504 PHKG2P15735 406 aa20.88■□□□□ 0.93
PCCB-218ENST00000490504 IL13P35225 146 aa20.88■□□□□ 0.93
PCCB-218ENST00000490504 AEBP1Q8IUX7 1158 aa20.88■□□□□ 0.93
PCCB-218ENST00000490504 PPP1R1BQ9UD71 204 aaPredicted RBP20.88■□□□□ 0.93
PCCB-218ENST00000490504 CASZ1Q86V15 1759 aa20.88■□□□□ 0.93
PCCB-218ENST00000490504 MTHFSP49914 203 aa20.87■□□□□ 0.93
PCCB-218ENST00000490504 IFNL2Q8IZJ0 200 aa20.87■□□□□ 0.93
PCCB-218ENST00000490504 PIGBQ92521 554 aa20.87■□□□□ 0.93
PCCB-218ENST00000490504 PKD1L3Q7Z443 1732 aa20.87■□□□□ 0.93
PCCB-218ENST00000490504 PTGER2P43116 358 aa20.86■□□□□ 0.93
PCCB-218ENST00000490504 MTFR1LQ9H019 292 aa20.85■□□□□ 0.93
PCCB-218ENST00000490504 PLEKHO1Q53GL0 409 aaPredicted RBP20.84■□□□□ 0.93
PCCB-218ENST00000490504 SULT6B1Q6IMI4 303 aa20.84■□□□□ 0.93
PCCB-218ENST00000490504 PALLDQ8WX93 1383 aa20.84■□□□□ 0.93
PCCB-218ENST00000490504 TFCP2L1Q9NZI6 479 aa20.83■□□□□ 0.93
PCCB-218ENST00000490504 PPP2R1AP30153 589 aa20.82■□□□□ 0.92
PCCB-218ENST00000490504 PNPLA7Q6ZV29 1317 aa20.82■□□□□ 0.92
PCCB-218ENST00000490504 PLEKHG2Q9H7P9 1386 aa20.82■□□□□ 0.92
PCCB-218ENST00000490504 SMARCC1Q92922 1105 aaPredicted RBP20.82■□□□□ 0.92
PCCB-218ENST00000490504 TMOD3Q9NYL9 352 aa20.82■□□□□ 0.92
PCCB-218ENST00000490504 TOGARAM1Q9Y4F4 1720 aa20.81■□□□□ 0.92
PCCB-218ENST00000490504 ZNF530Q6P9A1 599 aaPredicted RBP20.81■□□□□ 0.92
PCCB-218ENST00000490504 SGIP1Q9BQI5 828 aa20.81■□□□□ 0.92
PCCB-218ENST00000490504 AMOTQ4VCS5 1084 aa20.8■□□□□ 0.92
PCCB-218ENST00000490504 GTF3C3Q9Y5Q9 886 aa20.8■□□□□ 0.92
PCCB-218ENST00000490504 KDRP35968 1356 aa20.79■□□□□ 0.92
PCCB-218ENST00000490504 ZBED9Q6R2W3 1325 aa20.79■□□□□ 0.92
PCCB-218ENST00000490504 ASAP1Q9ULH1 1129 aa20.79■□□□□ 0.92
PCCB-218ENST00000490504 LY75O60449 1722 aa20.79■□□□□ 0.92
PCCB-218ENST00000490504 DCAF5Q96JK2 942 aa20.78■□□□□ 0.92
PCCB-218ENST00000490504 HSP90AB1P08238 724 aaKnown RBP20.77■□□□□ 0.92
PCCB-218ENST00000490504 ERVV-2B6SEH9 535 aa20.76■□□□□ 0.91
PCCB-218ENST00000490504 DIAPH1O60610 1272 aaKnown RBP20.76■□□□□ 0.91
PCCB-218ENST00000490504 HMOX1P09601 288 aa20.76■□□□□ 0.91
PCCB-218ENST00000490504 SLC16A10Q8TF71 515 aa20.76■□□□□ 0.91
PCCB-218ENST00000490504 ATG3Q9NT62 314 aa20.76■□□□□ 0.91
PCCB-218ENST00000490504 LOC102724428A0A0B4J2F2 783 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms