RNA–Protein interactions for RNA: ENST00000490117.5

CPA4-208, Transcript of carboxypeptidase A4, humanhuman

TSL 2

Gene CPA4, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-208ENST00000490117 DOT1LQ8TEK3 1739 aa9.87□□□□□ -0.83
CPA4-208ENST00000490117 TOGARAM1Q9Y4F4 1720 aa9.87□□□□□ -0.83
CPA4-208ENST00000490117 AFF2P51816 1311 aa9.86□□□□□ -0.83
CPA4-208ENST00000490117 MAPK8IP3Q9UPT6 1336 aa9.86□□□□□ -0.83
CPA4-208ENST00000490117 SIPA1L3O60292 1781 aaPredicted RBP9.86□□□□□ -0.83
CPA4-208ENST00000490117 KAT6BQ8WYB5 2073 aa9.86□□□□□ -0.83
CPA4-208ENST00000490117 APAF1O14727 1248 aa9.86□□□□□ -0.83
CPA4-208ENST00000490117 NEUROD2Q15784 382 aa9.86□□□□□ -0.83
CPA4-208ENST00000490117 CCDC9Q9Y3X0 531 aaKnown RBP9.86□□□□□ -0.83
CPA4-208ENST00000490117 ITGB4P16144 1822 aa9.86□□□□□ -0.83
CPA4-208ENST00000490117 TCP11L2Q8N4U5 519 aa9.85□□□□□ -0.83
CPA4-208ENST00000490117 USP21Q9UK80 565 aa9.85□□□□□ -0.83
CPA4-208ENST00000490117 THSD7AQ9UPZ6 1657 aa9.84□□□□□ -0.83
CPA4-208ENST00000490117 FCHSD2O94868 740 aa9.84□□□□□ -0.83
CPA4-208ENST00000490117 CARD10Q9BWT7 1032 aa9.84□□□□□ -0.83
CPA4-208ENST00000490117 OVOS2A0A0G2JMS6 1433 aa9.83□□□□□ -0.84
CPA4-208ENST00000490117 DISP2A7MBM2 1401 aa9.83□□□□□ -0.84
CPA4-208ENST00000490117 TATP17735 454 aaPredicted RBP9.83□□□□□ -0.84
CPA4-208ENST00000490117 TMPOP42166 694 aaKnown RBP9.83□□□□□ -0.84
CPA4-208ENST00000490117 MTHFSDQ2M296 383 aaKnown RBP9.83□□□□□ -0.84
CPA4-208ENST00000490117 ADAMTS7Q9UKP4 1686 aa9.83□□□□□ -0.84
CPA4-208ENST00000490117 SPATA31A1Q5TZJ5 1347 aa9.82□□□□□ -0.84
CPA4-208ENST00000490117 ATRNO75882 1429 aa9.82□□□□□ -0.84
CPA4-208ENST00000490117 NEFMP07197 916 aa9.82□□□□□ -0.84
CPA4-208ENST00000490117 C1QBPQ07021 282 aaKnown RBP9.82□□□□□ -0.84
CPA4-208ENST00000490117 NFE2L2Q16236 605 aa9.82□□□□□ -0.84
CPA4-208ENST00000490117 ILDR1Q86SU0 546 aaPredicted RBP9.82□□□□□ -0.84
CPA4-208ENST00000490117 UNC5CLQ8IV45 518 aa9.82□□□□□ -0.84
CPA4-208ENST00000490117 FNBP4Q8N3X1 1017 aaPredicted RBP9.82□□□□□ -0.84
CPA4-208ENST00000490117 RAPGEF4Q8WZA2 1011 aa9.82□□□□□ -0.84
CPA4-208ENST00000490117 THUMPD2Q9BTF0 503 aaKnown RBP9.82□□□□□ -0.84
CPA4-208ENST00000490117 SBF2Q86WG5 1849 aa9.82□□□□□ -0.84
CPA4-208ENST00000490117 SPATA31A5Q5VU36 1347 aa9.82□□□□□ -0.84
CPA4-208ENST00000490117 SPATA31A7Q8IWB4 1347 aa9.82□□□□□ -0.84
CPA4-208ENST00000490117 KDM3BQ7LBC6 1761 aa9.81□□□□□ -0.84
CPA4-208ENST00000490117 RIPK4P57078 832 aa9.81□□□□□ -0.84
CPA4-208ENST00000490117 DCTN1Q14203 1278 aa9.81□□□□□ -0.84
CPA4-208ENST00000490117 ZNF530Q6P9A1 599 aaPredicted RBP9.81□□□□□ -0.84
CPA4-208ENST00000490117 ZBED9Q6R2W3 1325 aa9.81□□□□□ -0.84
CPA4-208ENST00000490117 IL2RBP14784 551 aa9.8□□□□□ -0.84
CPA4-208ENST00000490117 VPS72Q15906 364 aa9.8□□□□□ -0.84
CPA4-208ENST00000490117 PNNQ9H307 717 aaKnown RBP9.8□□□□□ -0.84
CPA4-208ENST00000490117 TRIM35Q9UPQ4 493 aa9.8□□□□□ -0.84
CPA4-208ENST00000490117 TNS2Q63HR2 1409 aa9.8□□□□□ -0.84
CPA4-208ENST00000490117 MAP3K5Q99683 1374 aa9.79□□□□□ -0.84
CPA4-208ENST00000490117 A0A0G2JS52 829 aa9.79□□□□□ -0.84
CPA4-208ENST00000490117 MYT1Q01538 1121 aa9.79□□□□□ -0.84
CPA4-208ENST00000490117 FAM98CQ17RN3 349 aaKnown RBP9.79□□□□□ -0.84
CPA4-208ENST00000490117 PLEKHO1Q53GL0 409 aaPredicted RBP9.79□□□□□ -0.84
CPA4-208ENST00000490117 MCM10Q7L590 875 aa9.79□□□□□ -0.84
CPA4-208ENST00000490117 GAS2L2Q8NHY3 880 aa9.79□□□□□ -0.84
CPA4-208ENST00000490117 C5P01031 1676 aa9.78□□□□□ -0.84
CPA4-208ENST00000490117 CDCA7LQ96GN5 454 aa9.78□□□□□ -0.84
CPA4-208ENST00000490117 KDM6AO15550 1401 aaPredicted RBP9.78□□□□□ -0.84
CPA4-208ENST00000490117 PAPPAQ13219 1627 aa9.78□□□□□ -0.84
CPA4-208ENST00000490117 CYP27B1O15528 508 aa9.77□□□□□ -0.85
CPA4-208ENST00000490117 MPRIPQ6WCQ1 1025 aa9.77□□□□□ -0.85
CPA4-208ENST00000490117 ZCRB1Q8TBF4 217 aaKnown RBP9.77□□□□□ -0.85
CPA4-208ENST00000490117 DDX54Q8TDD1 881 aaKnown RBP9.77□□□□□ -0.85
CPA4-208ENST00000490117 QTRT2Q9H974 415 aaKnown RBP9.77□□□□□ -0.85
CPA4-208ENST00000490117 SPINK5Q9NQ38 1064 aaPredicted RBP9.77□□□□□ -0.85
CPA4-208ENST00000490117 TRPC5Q9UL62 973 aaPredicted RBP9.77□□□□□ -0.85
CPA4-208ENST00000490117 SPG7Q9UQ90 795 aa9.77□□□□□ -0.85
CPA4-208ENST00000490117 ZNF521Q96K83 1311 aa9.77□□□□□ -0.85
CPA4-208ENST00000490117 GNAT3A8MTJ3 354 aa9.76□□□□□ -0.85
CPA4-208ENST00000490117 PHKG2P15735 406 aa9.76□□□□□ -0.85
CPA4-208ENST00000490117 C1orf141Q5JVX7 400 aa9.76□□□□□ -0.85
CPA4-208ENST00000490117 WWC1Q8IX03 1113 aa9.76□□□□□ -0.85
CPA4-208ENST00000490117 GJD4Q96KN9 370 aaPredicted RBP9.76□□□□□ -0.85
CPA4-208ENST00000490117 LGR6Q9HBX8 967 aa9.76□□□□□ -0.85
CPA4-208ENST00000490117 LAS1LQ9Y4W2 734 aaKnown RBP9.76□□□□□ -0.85
CPA4-208ENST00000490117 BTAF1O14981 1849 aa9.76□□□□□ -0.85
CPA4-208ENST00000490117 UBR2Q8IWV8 1755 aa9.75□□□□□ -0.85
CPA4-208ENST00000490117 NHSQ6T4R5 1651 aa9.75□□□□□ -0.85
CPA4-208ENST00000490117 MRC1P22897 1456 aa9.75□□□□□ -0.85
CPA4-208ENST00000490117 AMOTQ4VCS5 1084 aa9.75□□□□□ -0.85
CPA4-208ENST00000490117 AKAP4Q5JQC9 854 aa9.75□□□□□ -0.85
CPA4-208ENST00000490117 RGS17Q9UGC6 210 aaPredicted RBP9.75□□□□□ -0.85
CPA4-208ENST00000490117 PCDH11XQ9BZA7 1347 aa9.75□□□□□ -0.85
CPA4-208ENST00000490117 PCDH11YQ9BZA8 1340 aa9.75□□□□□ -0.85
CPA4-208ENST00000490117 LAMB4A4D0S4 1761 aa9.74□□□□□ -0.85
CPA4-208ENST00000490117 LMOD3Q0VAK6 560 aa9.74□□□□□ -0.85
CPA4-208ENST00000490117 DDB1Q16531 1140 aa9.74□□□□□ -0.85
CPA4-208ENST00000490117 CCDC27Q2M243 656 aa9.74□□□□□ -0.85
CPA4-208ENST00000490117 FAM182BQ5T319 152 aa9.74□□□□□ -0.85
CPA4-208ENST00000490117 BARGINQ6ZT62 677 aa9.74□□□□□ -0.85
CPA4-208ENST00000490117 IFNL2Q8IZJ0 200 aa9.74□□□□□ -0.85
CPA4-208ENST00000490117 IL17REQ8NFR9 667 aa9.74□□□□□ -0.85
CPA4-208ENST00000490117 RTF1Q92541 710 aaKnown RBP9.74□□□□□ -0.85
CPA4-208ENST00000490117 TSR2Q969E8 191 aaKnown RBP9.74□□□□□ -0.85
CPA4-208ENST00000490117 THRAP3Q9Y2W1 955 aaKnown RBP9.74□□□□□ -0.85
CPA4-208ENST00000490117 RGS12O14924 1447 aa9.73□□□□□ -0.85
CPA4-208ENST00000490117 EXOC5O00471 708 aa9.73□□□□□ -0.85
CPA4-208ENST00000490117 RNMTO43148 476 aaKnown RBP9.73□□□□□ -0.85
CPA4-208ENST00000490117 GOLGA2Q08379 1002 aa9.73□□□□□ -0.85
CPA4-208ENST00000490117 ZNF772Q68DY9 489 aaPredicted RBP9.73□□□□□ -0.85
CPA4-208ENST00000490117 POTEAQ6S8J7 498 aa9.73□□□□□ -0.85
CPA4-208ENST00000490117 MIS18AQ9NYP9 233 aa9.73□□□□□ -0.85
CPA4-208ENST00000490117 SLFN5Q08AF3 891 aa9.72□□□□□ -0.85
CPA4-208ENST00000490117 SEPT12Q8IYM1 358 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms