RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 TPRNQ4KMQ1 711 aa16.53■□□□□ 0.24
TNXB-206ENST00000490077 FOXD4L3Q6VB84 417 aaPredicted RBP16.53■□□□□ 0.24
TNXB-206ENST00000490077 FSD2A1L4K1 749 aa16.53■□□□□ 0.24
TNXB-206ENST00000490077 PTCH1Q13635 1447 aa16.52■□□□□ 0.24
TNXB-206ENST00000490077 NRXN3Q9Y4C0 1643 aa16.52■□□□□ 0.23
TNXB-206ENST00000490077 EDC4Q6P2E9 1401 aaKnown RBP16.52■□□□□ 0.23
TNXB-206ENST00000490077 GOLGA6L3A6NEY3 463 aa16.52■□□□□ 0.23
TNXB-206ENST00000490077 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.23
TNXB-206ENST00000490077 IL25Q9H293 177 aa16.52■□□□□ 0.23
TNXB-206ENST00000490077 CHL1O00533 1208 aa16.51■□□□□ 0.23
TNXB-206ENST00000490077 DCTPP1Q9H773 170 aa16.51■□□□□ 0.23
TNXB-206ENST00000490077 ANKRD26Q9UPS8 1709 aa16.51■□□□□ 0.23
TNXB-206ENST00000490077 ZBTB7CA1YPR0 619 aa16.51■□□□□ 0.23
TNXB-206ENST00000490077 ANXA1P04083 346 aa16.51■□□□□ 0.23
TNXB-206ENST00000490077 MAP4K4O95819 1239 aaPredicted RBP16.5■□□□□ 0.23
TNXB-206ENST00000490077 LARP6Q9BRS8 491 aaKnown RBP16.5■□□□□ 0.23
TNXB-206ENST00000490077 PNMA6EA0A0J9YXQ4 647 aa16.5■□□□□ 0.23
TNXB-206ENST00000490077 ATP10DQ9P241 1426 aa16.5■□□□□ 0.23
TNXB-206ENST00000490077 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
TNXB-206ENST00000490077 GCC1Q96CN9 775 aa16.49■□□□□ 0.23
TNXB-206ENST00000490077 EYA1Q99502 592 aa16.49■□□□□ 0.23
TNXB-206ENST00000490077 PNNQ9H307 717 aaKnown RBP16.49■□□□□ 0.23
TNXB-206ENST00000490077 UNC5CLQ8IV45 518 aa16.49■□□□□ 0.23
TNXB-206ENST00000490077 PIK3R4Q99570 1358 aa16.49■□□□□ 0.23
TNXB-206ENST00000490077 TTC22Q5TAA0 569 aa16.49■□□□□ 0.23
TNXB-206ENST00000490077 ATP7BP35670 1465 aa16.48■□□□□ 0.23
TNXB-206ENST00000490077 SETD1AO15047 1707 aaKnown RBP16.48■□□□□ 0.23
TNXB-206ENST00000490077 ARHGAP45Q92619 1136 aa16.48■□□□□ 0.23
TNXB-206ENST00000490077 USP26Q9BXU7 913 aa16.48■□□□□ 0.23
TNXB-206ENST00000490077 NSFL1CQ9UNZ2 370 aaKnown RBP16.48■□□□□ 0.23
TNXB-206ENST00000490077 RTL1A6NKG5 1358 aa16.48■□□□□ 0.23
TNXB-206ENST00000490077 K7ELQ4 463 aaPredicted RBP16.47■□□□□ 0.23
TNXB-206ENST00000490077 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
TNXB-206ENST00000490077 PALD1Q9ULE6 856 aa16.47■□□□□ 0.23
TNXB-206ENST00000490077 PTPRUQ92729 1446 aa16.47■□□□□ 0.23
TNXB-206ENST00000490077 RAB3GAP1Q15042 981 aa16.47■□□□□ 0.23
TNXB-206ENST00000490077 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
TNXB-206ENST00000490077 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
TNXB-206ENST00000490077 TNRQ92752 1358 aa16.47■□□□□ 0.23
TNXB-206ENST00000490077 NCOA3Q9Y6Q9 1424 aa16.46■□□□□ 0.23
TNXB-206ENST00000490077 CDC45O75419 566 aa16.46■□□□□ 0.23
TNXB-206ENST00000490077 INTS3Q68E01 1043 aaKnown RBP16.46■□□□□ 0.23
TNXB-206ENST00000490077 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.46■□□□□ 0.23
TNXB-206ENST00000490077 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
TNXB-206ENST00000490077 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
TNXB-206ENST00000490077 KCNQ3O43525 872 aa16.45■□□□□ 0.22
TNXB-206ENST00000490077 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
TNXB-206ENST00000490077 SNX21Q969T3 373 aa16.45■□□□□ 0.22
TNXB-206ENST00000490077 PHAXQ9H814 394 aaKnown RBP16.45■□□□□ 0.22
TNXB-206ENST00000490077 IL1RAPL2Q9NP60 686 aa16.45■□□□□ 0.22
TNXB-206ENST00000490077 AMOTL2Q9Y2J4 779 aa16.45■□□□□ 0.22
TNXB-206ENST00000490077 SETD1BQ9UPS6 1966 aaKnown RBP16.45■□□□□ 0.22
TNXB-206ENST00000490077 CDK12Q9NYV4 1490 aaPredicted RBP16.45■□□□□ 0.22
TNXB-206ENST00000490077 NCLP19338 710 aaKnown RBP16.44■□□□□ 0.22
TNXB-206ENST00000490077 GRPEL1Q9HAV7 217 aa16.44■□□□□ 0.22
TNXB-206ENST00000490077 CDC42BPGQ6DT37 1551 aa16.44■□□□□ 0.22
TNXB-206ENST00000490077 MCTP1Q6DN14 999 aa16.44■□□□□ 0.22
TNXB-206ENST00000490077 ZDHHC9Q9Y397 364 aa16.44■□□□□ 0.22
TNXB-206ENST00000490077 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.44■□□□□ 0.22
TNXB-206ENST00000490077 XPCQ01831 940 aaPredicted RBP16.43■□□□□ 0.22
TNXB-206ENST00000490077 ADAMTS13Q76LX8 1427 aa16.43■□□□□ 0.22
TNXB-206ENST00000490077 FAM43AQ8N2R8 423 aa16.43■□□□□ 0.22
TNXB-206ENST00000490077 NGDNQ8NEJ9 315 aaKnown RBP16.43■□□□□ 0.22
TNXB-206ENST00000490077 CRB1P82279 1406 aa16.43■□□□□ 0.22
TNXB-206ENST00000490077 IL17REQ8NFR9 667 aa16.43■□□□□ 0.22
TNXB-206ENST00000490077 AATKQ6ZMQ8 1374 aa16.42■□□□□ 0.22
TNXB-206ENST00000490077 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
TNXB-206ENST00000490077 AMPHP49418 695 aa16.42■□□□□ 0.22
TNXB-206ENST00000490077 NLRP6P59044 892 aa16.42■□□□□ 0.22
TNXB-206ENST00000490077 BAG4O95429 457 aaKnown RBP16.41■□□□□ 0.22
TNXB-206ENST00000490077 DDX54Q8TDD1 881 aaKnown RBP16.41■□□□□ 0.22
TNXB-206ENST00000490077 EIF2S2P20042 333 aaKnown RBP16.41■□□□□ 0.22
TNXB-206ENST00000490077 COL9A3Q14050 684 aaPredicted RBP16.41■□□□□ 0.22
TNXB-206ENST00000490077 NUTM1Q86Y26 1132 aa16.41■□□□□ 0.22
TNXB-206ENST00000490077 MPNDQ8N594 471 aa16.41■□□□□ 0.22
TNXB-206ENST00000490077 UPF3BQ9BZI7 483 aaKnown RBP16.41■□□□□ 0.22
TNXB-206ENST00000490077 FKBP5Q13451 457 aaPredicted RBP16.4■□□□□ 0.22
TNXB-206ENST00000490077 LGR6Q9HBX8 967 aa16.4■□□□□ 0.22
TNXB-206ENST00000490077 TMEM2Q9UHN6 1383 aa16.4■□□□□ 0.22
TNXB-206ENST00000490077 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
TNXB-206ENST00000490077 RILPL2Q969X0 211 aa16.39■□□□□ 0.21
TNXB-206ENST00000490077 LRRFIP2Q9Y608 721 aaKnown RBP16.39■□□□□ 0.21
TNXB-206ENST00000490077 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
TNXB-206ENST00000490077 PDE1AP54750 535 aa16.39■□□□□ 0.21
TNXB-206ENST00000490077 GDPD2Q9HCC8 539 aa16.39■□□□□ 0.21
TNXB-206ENST00000490077 CAVIN1Q6NZI2 390 aaKnown RBP16.38■□□□□ 0.21
TNXB-206ENST00000490077 UBR1Q8IWV7 1749 aa16.38■□□□□ 0.21
TNXB-206ENST00000490077 CPA1P15085 419 aa16.38■□□□□ 0.21
TNXB-206ENST00000490077 LMOD3Q0VAK6 560 aa16.38■□□□□ 0.21
TNXB-206ENST00000490077 USP6P35125 1406 aa16.37■□□□□ 0.21
TNXB-206ENST00000490077 PRPF40AO75400 957 aaKnown RBP16.37■□□□□ 0.21
TNXB-206ENST00000490077 KCNA6P17658 529 aa16.37■□□□□ 0.21
TNXB-206ENST00000490077 LRRC59Q96AG4 307 aaKnown RBP16.37■□□□□ 0.21
TNXB-206ENST00000490077 DDX49Q9Y6V7 483 aaKnown RBP16.37■□□□□ 0.21
TNXB-206ENST00000490077 OVOS2A0A0J9YW53 1432 aa16.37■□□□□ 0.21
TNXB-206ENST00000490077 OVOS2Q6IE36 1432 aa16.37■□□□□ 0.21
TNXB-206ENST00000490077 FLIIQ13045 1269 aa16.37■□□□□ 0.21
TNXB-206ENST00000490077 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
TNXB-206ENST00000490077 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.37■□□□□ 0.21
TNXB-206ENST00000490077 RTF1Q92541 710 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms