RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 HSPA5P11021 654 aaKnown RBP16.56■□□□□ 0.24
SRSF4-204ENST00000489898 NLRP2Q9NX02 1062 aa16.56■□□□□ 0.24
SRSF4-204ENST00000489898 UBR3Q6ZT12 1888 aa16.56■□□□□ 0.24
SRSF4-204ENST00000489898 COL5A3P25940 1745 aaPredicted RBP16.54■□□□□ 0.24
SRSF4-204ENST00000489898 NBPF6Q5VWK0 638 aa16.54■□□□□ 0.24
SRSF4-204ENST00000489898 NBPF4Q96M43 638 aa16.54■□□□□ 0.24
SRSF4-204ENST00000489898 PDGFDQ9GZP0 370 aaPredicted RBP16.54■□□□□ 0.24
SRSF4-204ENST00000489898 EMILIN1Q9Y6C2 1016 aa16.54■□□□□ 0.24
SRSF4-204ENST00000489898 ZNF831Q5JPB2 1677 aa16.53■□□□□ 0.24
SRSF4-204ENST00000489898 CICQ96RK0 1608 aaPredicted RBP16.53■□□□□ 0.24
SRSF4-204ENST00000489898 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
SRSF4-204ENST00000489898 EXOC5O00471 708 aa16.52■□□□□ 0.24
SRSF4-204ENST00000489898 CDCA8Q53HL2 280 aa16.52■□□□□ 0.24
SRSF4-204ENST00000489898 ADAMTS7Q9UKP4 1686 aa16.52■□□□□ 0.23
SRSF4-204ENST00000489898 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
SRSF4-204ENST00000489898 USHBP1Q8N6Y0 703 aa16.51■□□□□ 0.23
SRSF4-204ENST00000489898 LTV1Q96GA3 475 aaPredicted RBP16.51■□□□□ 0.23
SRSF4-204ENST00000489898 ACSBG1Q96GR2 724 aa16.5■□□□□ 0.23
SRSF4-204ENST00000489898 C4BP0C0L5 1744 aa16.5■□□□□ 0.23
SRSF4-204ENST00000489898 TXNRD1Q16881 649 aa16.49■□□□□ 0.23
SRSF4-204ENST00000489898 AMPHP49418 695 aa16.48■□□□□ 0.23
SRSF4-204ENST00000489898 EIF4G2P78344 907 aaKnown RBP eCLIP16.48■□□□□ 0.23
SRSF4-204ENST00000489898 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
SRSF4-204ENST00000489898 LRRC4BQ9NT99 713 aa16.48■□□□□ 0.23
SRSF4-204ENST00000489898 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
SRSF4-204ENST00000489898 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
SRSF4-204ENST00000489898 WASHC2AQ641Q2 1341 aa16.46■□□□□ 0.23
SRSF4-204ENST00000489898 C4AP0C0L4 1744 aa16.46■□□□□ 0.23
SRSF4-204ENST00000489898 TJP1Q07157 1748 aa16.46■□□□□ 0.23
SRSF4-204ENST00000489898 POLKQ9UBT6 870 aa16.46■□□□□ 0.23
SRSF4-204ENST00000489898 CGNL1Q0VF96 1302 aa16.45■□□□□ 0.22
SRSF4-204ENST00000489898 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
SRSF4-204ENST00000489898 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
SRSF4-204ENST00000489898 SIPA1L3O60292 1781 aaPredicted RBP16.44■□□□□ 0.22
SRSF4-204ENST00000489898 PLEKHG2Q9H7P9 1386 aa16.44■□□□□ 0.22
SRSF4-204ENST00000489898 CYP27B1O15528 508 aa16.44■□□□□ 0.22
SRSF4-204ENST00000489898 PTGER2P43116 358 aa16.44■□□□□ 0.22
SRSF4-204ENST00000489898 KIAA1551Q9HCM1 1747 aa16.43■□□□□ 0.22
SRSF4-204ENST00000489898 UBR2Q8IWV8 1755 aa16.42■□□□□ 0.22
SRSF4-204ENST00000489898 IGSF1Q8N6C5 1336 aa16.42■□□□□ 0.22
SRSF4-204ENST00000489898 MYH14Q7Z406 1995 aaKnown RBP16.41■□□□□ 0.22
SRSF4-204ENST00000489898 SLC15A2Q16348 729 aa16.41■□□□□ 0.22
SRSF4-204ENST00000489898 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
SRSF4-204ENST00000489898 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
SRSF4-204ENST00000489898 PANK3Q9H999 370 aa16.41■□□□□ 0.22
SRSF4-204ENST00000489898 KDM6AO15550 1401 aaPredicted RBP16.4■□□□□ 0.22
SRSF4-204ENST00000489898 AMER1Q5JTC6 1135 aaPredicted RBP16.4■□□□□ 0.22
SRSF4-204ENST00000489898 DDX54Q8TDD1 881 aaKnown RBP16.4■□□□□ 0.22
SRSF4-204ENST00000489898 EYA1Q99502 592 aa16.4■□□□□ 0.22
SRSF4-204ENST00000489898 KDRP35968 1356 aa16.39■□□□□ 0.21
SRSF4-204ENST00000489898 EIF4A2Q14240 407 aaKnown RBP16.39■□□□□ 0.21
SRSF4-204ENST00000489898 NBPF14Q5TI25 921 aa16.39■□□□□ 0.21
SRSF4-204ENST00000489898 MRC1P22897 1456 aa16.39■□□□□ 0.21
SRSF4-204ENST00000489898 PCDH11XQ9BZA7 1347 aa16.39■□□□□ 0.21
SRSF4-204ENST00000489898 PCDH11YQ9BZA8 1340 aa16.39■□□□□ 0.21
SRSF4-204ENST00000489898 CHD4Q14839 1912 aa16.39■□□□□ 0.21
SRSF4-204ENST00000489898 KIF13BQ9NQT8 1826 aa16.38■□□□□ 0.21
SRSF4-204ENST00000489898 PER1O15534 1290 aaPredicted RBP16.37■□□□□ 0.21
SRSF4-204ENST00000489898 PRIM1P49642 420 aaKnown RBP16.37■□□□□ 0.21
SRSF4-204ENST00000489898 KCNQ4P56696 695 aa16.37■□□□□ 0.21
SRSF4-204ENST00000489898 PNPLA7Q6ZV29 1317 aa16.37■□□□□ 0.21
SRSF4-204ENST00000489898 NKX1-1Q15270 411 aaPredicted RBP16.36■□□□□ 0.21
SRSF4-204ENST00000489898 BRCA1P38398 1863 aaKnown RBP16.34■□□□□ 0.21
SRSF4-204ENST00000489898 ZBTB7AO95365 584 aa16.34■□□□□ 0.21
SRSF4-204ENST00000489898 TATP17735 454 aaPredicted RBP16.34■□□□□ 0.21
SRSF4-204ENST00000489898 AMIGO3Q86WK7 504 aa16.34■□□□□ 0.21
SRSF4-204ENST00000489898 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
SRSF4-204ENST00000489898 SPON1Q9HCB6 807 aa16.34■□□□□ 0.21
SRSF4-204ENST00000489898 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
SRSF4-204ENST00000489898 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
SRSF4-204ENST00000489898 SLC27A3Q5K4L6 730 aa16.33■□□□□ 0.2
SRSF4-204ENST00000489898 POLR3GLQ9BT43 218 aa16.33■□□□□ 0.2
SRSF4-204ENST00000489898 STK32BQ9NY57 414 aa16.32■□□□□ 0.2
SRSF4-204ENST00000489898 NPC1L1Q9UHC9 1359 aa16.32■□□□□ 0.2
SRSF4-204ENST00000489898 TNNT2P45379 298 aaPredicted RBP16.31■□□□□ 0.2
SRSF4-204ENST00000489898 AEBP1Q8IUX7 1158 aa16.31■□□□□ 0.2
SRSF4-204ENST00000489898 PPM1GO15355 546 aaPredicted RBP16.3■□□□□ 0.2
SRSF4-204ENST00000489898 PHKG2P15735 406 aa16.3■□□□□ 0.2
SRSF4-204ENST00000489898 MTFR1LQ9H019 292 aa16.3■□□□□ 0.2
SRSF4-204ENST00000489898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.21e-6■□□□□ 9.7
SRSF4-204ENST00000489898 DLG5Q8TDM6 1919 aa16.29■□□□□ 0.2
SRSF4-204ENST00000489898 KCPQ6ZWJ8 1503 aa16.29■□□□□ 0.2
SRSF4-204ENST00000489898 PIGBQ92521 554 aa16.28■□□□□ 0.2
SRSF4-204ENST00000489898 SYTL4Q96C24 671 aaPredicted RBP16.28■□□□□ 0.2
SRSF4-204ENST00000489898 IL13P35225 146 aa16.27■□□□□ 0.2
SRSF4-204ENST00000489898 ATF5Q9Y2D1 282 aaPredicted RBP16.27■□□□□ 0.2
SRSF4-204ENST00000489898 CCNL1Q9UK58 526 aaPredicted RBP16.26■□□□□ 0.19
SRSF4-204ENST00000489898 SLC4A9Q96Q91 983 aa16.25■□□□□ 0.19
SRSF4-204ENST00000489898 ITPK1Q13572 414 aa16.23■□□□□ 0.19
SRSF4-204ENST00000489898 MPRIPQ6WCQ1 1025 aa16.23■□□□□ 0.19
SRSF4-204ENST00000489898 COL23A1Q86Y22 540 aaPredicted RBP16.23■□□□□ 0.19
SRSF4-204ENST00000489898 FHDC1Q9C0D6 1143 aaPredicted RBP16.23■□□□□ 0.19
SRSF4-204ENST00000489898 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
SRSF4-204ENST00000489898 N4BP2Q86UW6 1770 aaPredicted RBP16.23■□□□□ 0.19
SRSF4-204ENST00000489898 NRXN2Q9P2S2 1712 aa16.22■□□□□ 0.19
SRSF4-204ENST00000489898 MORC1Q86VD1 984 aa16.22■□□□□ 0.19
SRSF4-204ENST00000489898 LINC00116Q8NCU8 138 aa16.22■□□□□ 0.19
SRSF4-204ENST00000489898 ASAP1Q9ULH1 1129 aa16.22■□□□□ 0.19
SRSF4-204ENST00000489898 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
SRSF4-204ENST00000489898 AFDNP55196 1824 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms