RNA–Protein interactions for RNA: ENST00000489444.6

GBP3-207, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,455 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-207ENST00000489444 HOXC9P31274 260 aa6.63□□□□□ -1.35
GBP3-207ENST00000489444 AMPHP49418 695 aa6.63□□□□□ -1.35
GBP3-207ENST00000489444 PEAK1Q9H792 1746 aa6.63□□□□□ -1.35
GBP3-207ENST00000489444 OVOS2A0A0G2JMS6 1433 aa6.63□□□□□ -1.35
GBP3-207ENST00000489444 TNS2Q63HR2 1409 aa6.63□□□□□ -1.35
GBP3-207ENST00000489444 ZNF316A6NFI3 1004 aaPredicted RBP6.62□□□□□ -1.35
GBP3-207ENST00000489444 DDB1Q16531 1140 aa6.62□□□□□ -1.35
GBP3-207ENST00000489444 BCL9O00512 1426 aa6.62□□□□□ -1.35
GBP3-207ENST00000489444 FLT4P35916 1363 aa6.62□□□□□ -1.35
GBP3-207ENST00000489444 BAG6P46379 1132 aa6.62□□□□□ -1.35
GBP3-207ENST00000489444 NLRP2Q9NX02 1062 aa6.62□□□□□ -1.35
GBP3-207ENST00000489444 INSRP06213 1382 aa6.62□□□□□ -1.35
GBP3-207ENST00000489444 PANK3Q9H999 370 aa6.61□□□□□ -1.35
GBP3-207ENST00000489444 KIF7Q2M1P5 1343 aa6.61□□□□□ -1.35
GBP3-207ENST00000489444 ECM2O94769 699 aaPredicted RBP6.61□□□□□ -1.35
GBP3-207ENST00000489444 IL2RBP14784 551 aa6.61□□□□□ -1.35
GBP3-207ENST00000489444 PARD3Q8TEW0 1356 aa6.61□□□□□ -1.35
GBP3-207ENST00000489444 EXOC5O00471 708 aa6.6□□□□□ -1.35
GBP3-207ENST00000489444 RRS1Q15050 365 aaKnown RBP6.6□□□□□ -1.35
GBP3-207ENST00000489444 RGPD3A6NKT7 1758 aaPredicted RBP6.6□□□□□ -1.35
GBP3-207ENST00000489444 RGPD4Q7Z3J3 1758 aa6.6□□□□□ -1.35
GBP3-207ENST00000489444 KNSTRNQ9Y448 316 aa6.6□□□□□ -1.35
GBP3-207ENST00000489444 RGL2O15211 777 aa6.59□□□□□ -1.35
GBP3-207ENST00000489444 FAM182BQ5T319 152 aa6.59□□□□□ -1.35
GBP3-207ENST00000489444 HOMEZQ8IX15 550 aa6.59□□□□□ -1.35
GBP3-207ENST00000489444 LTV1Q96GA3 475 aaPredicted RBP6.59□□□□□ -1.35
GBP3-207ENST00000489444 MARCH10Q8NA82 808 aaPredicted RBP6.59□□□□□ -1.35
GBP3-207ENST00000489444 NHSQ6T4R5 1651 aa6.59□□□□□ -1.35
GBP3-207ENST00000489444 RREB1Q92766 1687 aa6.59□□□□□ -1.35
GBP3-207ENST00000489444 NCAPD2Q15021 1401 aa6.59□□□□□ -1.36
GBP3-207ENST00000489444 DCAF8L1A6NGE4 600 aa6.58□□□□□ -1.36
GBP3-207ENST00000489444 TRIM37O94972 964 aa6.58□□□□□ -1.36
GBP3-207ENST00000489444 FBLN1P23142 703 aa6.58□□□□□ -1.36
GBP3-207ENST00000489444 WASHC2AQ641Q2 1341 aa6.58□□□□□ -1.36
GBP3-207ENST00000489444 PLEKHG2Q9H7P9 1386 aa6.58□□□□□ -1.36
GBP3-207ENST00000489444 NBR1Q14596 966 aa6.58□□□□□ -1.36
GBP3-207ENST00000489444 DEFB132Q7Z7B7 95 aa6.58□□□□□ -1.36
GBP3-207ENST00000489444 MORC1Q86VD1 984 aa6.58□□□□□ -1.36
GBP3-207ENST00000489444 SPRYD3Q8NCJ5 442 aa6.58□□□□□ -1.36
GBP3-207ENST00000489444 BCL11BQ9C0K0 894 aaPredicted RBP6.58□□□□□ -1.36
GBP3-207ENST00000489444 EMILIN1Q9Y6C2 1016 aa6.58□□□□□ -1.36
GBP3-207ENST00000489444 SBF2Q86WG5 1849 aa6.58□□□□□ -1.36
GBP3-207ENST00000489444 APBA3O96018 575 aa6.57□□□□□ -1.36
GBP3-207ENST00000489444 HSP90AB2PQ58FF8 381 aa6.57□□□□□ -1.36
GBP3-207ENST00000489444 POLKQ9UBT6 870 aa6.57□□□□□ -1.36
GBP3-207ENST00000489444 NPC1L1Q9UHC9 1359 aa6.57□□□□□ -1.36
GBP3-207ENST00000489444 MEGF6O75095 1541 aa6.57□□□□□ -1.36
GBP3-207ENST00000489444 RGPD2P0DJD1 1756 aa6.57□□□□□ -1.36
GBP3-207ENST00000489444 EN1Q05925 392 aaPredicted RBP6.57□□□□□ -1.36
GBP3-207ENST00000489444 NBPF6Q5VWK0 638 aa6.57□□□□□ -1.36
GBP3-207ENST00000489444 MIER1Q8N108 512 aa6.57□□□□□ -1.36
GBP3-207ENST00000489444 NBPF4Q96M43 638 aa6.57□□□□□ -1.36
GBP3-207ENST00000489444 YTHDC1Q96MU7 727 aaKnown RBP6.57□□□□□ -1.36
GBP3-207ENST00000489444 CAMKK2Q96RR4 588 aa6.57□□□□□ -1.36
GBP3-207ENST00000489444 NUP188Q5SRE5 1749 aa6.56□□□□□ -1.36
GBP3-207ENST00000489444 SHANK3Q9BYB0 1731 aa6.56□□□□□ -1.36
GBP3-207ENST00000489444 TATP17735 454 aaPredicted RBP6.56□□□□□ -1.36
GBP3-207ENST00000489444 RAPGEF4Q8WZA2 1011 aa6.56□□□□□ -1.36
GBP3-207ENST00000489444 MAP2P11137 1827 aaKnown RBP6.56□□□□□ -1.36
GBP3-207ENST00000489444 PKD1L3Q7Z443 1732 aa6.56□□□□□ -1.36
GBP3-207ENST00000489444 PLSCR1O15162 318 aa6.56□□□□□ -1.36
GBP3-207ENST00000489444 PPM1GO15355 546 aaPredicted RBP6.56□□□□□ -1.36
GBP3-207ENST00000489444 EZH2Q15910 746 aaKnown RBP6.56□□□□□ -1.36
GBP3-207ENST00000489444 POTEHQ6S545 545 aa6.56□□□□□ -1.36
GBP3-207ENST00000489444 ZCRB1Q8TBF4 217 aaKnown RBP6.56□□□□□ -1.36
GBP3-207ENST00000489444 SUPT16HQ9Y5B9 1047 aaKnown RBP6.56□□□□□ -1.36
GBP3-207ENST00000489444 PER1O15534 1290 aaPredicted RBP6.55□□□□□ -1.36
GBP3-207ENST00000489444 EP400Q96L91 3159 aa6.55□□□□□ -1.36
GBP3-207ENST00000489444 PCDH11XQ9BZA7 1347 aa6.55□□□□□ -1.36
GBP3-207ENST00000489444 PCDH11YQ9BZA8 1340 aa6.55□□□□□ -1.36
GBP3-207ENST00000489444 TNNT2P45379 298 aaPredicted RBP6.55□□□□□ -1.36
GBP3-207ENST00000489444 USHBP1Q8N6Y0 703 aa6.55□□□□□ -1.36
GBP3-207ENST00000489444 EIF4A2Q14240 407 aaKnown RBP6.54□□□□□ -1.36
GBP3-207ENST00000489444 DOT1LQ8TEK3 1739 aa6.54□□□□□ -1.36
GBP3-207ENST00000489444 IGSF1Q8N6C5 1336 aa6.54□□□□□ -1.36
GBP3-207ENST00000489444 NBPF14Q5TI25 921 aa6.54□□□□□ -1.36
GBP3-207ENST00000489444 DDX54Q8TDD1 881 aaKnown RBP6.54□□□□□ -1.36
GBP3-207ENST00000489444 EYA1Q99502 592 aa6.54□□□□□ -1.36
GBP3-207ENST00000489444 TMEM132AQ24JP5 1023 aa6.53□□□□□ -1.36
GBP3-207ENST00000489444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.53□□□□□ -1.36
GBP3-207ENST00000489444 SPG7Q9UQ90 795 aa6.53□□□□□ -1.36
GBP3-207ENST00000489444 LRP5O75197 1615 aa6.53□□□□□ -1.36
GBP3-207ENST00000489444 BTAF1O14981 1849 aa6.53□□□□□ -1.36
GBP3-207ENST00000489444 ACSBG1Q96GR2 724 aa6.53□□□□□ -1.36
GBP3-207ENST00000489444 SPOCK2Q92563 424 aa6.52□□□□□ -1.37
GBP3-207ENST00000489444 KCNQ2O43526 872 aa6.52□□□□□ -1.37
GBP3-207ENST00000489444 CC2D1BQ5T0F9 858 aaKnown RBP6.52□□□□□ -1.37
GBP3-207ENST00000489444 PAPPAQ13219 1627 aa6.52□□□□□ -1.37
GBP3-207ENST00000489444 IL13P35225 146 aa6.51□□□□□ -1.37
GBP3-207ENST00000489444 NKX1-1Q15270 411 aaPredicted RBP6.51□□□□□ -1.37
GBP3-207ENST00000489444 PTF1AQ7RTS3 328 aa6.51□□□□□ -1.37
GBP3-207ENST00000489444 KLHL34Q8N239 644 aa6.51□□□□□ -1.37
GBP3-207ENST00000489444 TOGARAM1Q9Y4F4 1720 aa6.51□□□□□ -1.37
GBP3-207ENST00000489444 HMGB2P26583 209 aaKnown RBP6.51□□□□□ -1.37
GBP3-207ENST00000489444 R3HDM1Q15032 1099 aaKnown RBP6.51□□□□□ -1.37
GBP3-207ENST00000489444 TXNRD1Q16881 649 aa6.51□□□□□ -1.37
GBP3-207ENST00000489444 AMOTQ4VCS5 1084 aa6.51□□□□□ -1.37
GBP3-207ENST00000489444 SLC27A3Q5K4L6 730 aa6.51□□□□□ -1.37
GBP3-207ENST00000489444 KDRP35968 1356 aa6.51□□□□□ -1.37
GBP3-207ENST00000489444 COL3A1P02461 1466 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms