RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 CHL1O00533 1208 aa11.17□□□□□ -0.62
CSMD2-209ENST00000489419 API5Q9BZZ5 524 aaKnown RBP11.17□□□□□ -0.62
CSMD2-209ENST00000489419 FMN2Q9NZ56 1722 aa11.17□□□□□ -0.62
CSMD2-209ENST00000489419 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
CSMD2-209ENST00000489419 PAXIP1Q6ZW49 1069 aaPredicted RBP11.17□□□□□ -0.62
CSMD2-209ENST00000489419 TSPYL6Q8N831 410 aa11.17□□□□□ -0.62
CSMD2-209ENST00000489419 ZNF142P52746 1687 aaPredicted RBP11.17□□□□□ -0.62
CSMD2-209ENST00000489419 AEBP1Q8IUX7 1158 aa11.16□□□□□ -0.62
CSMD2-209ENST00000489419 ABCC4O15439 1325 aa11.16□□□□□ -0.62
CSMD2-209ENST00000489419 ZBTB7BO15156 539 aaPredicted RBP11.16□□□□□ -0.62
CSMD2-209ENST00000489419 HTATSF1O43719 755 aaKnown RBP11.16□□□□□ -0.62
CSMD2-209ENST00000489419 C8orf58Q8NAV2 365 aa11.16□□□□□ -0.62
CSMD2-209ENST00000489419 CHD2O14647 1828 aaKnown RBP11.15□□□□□ -0.62
CSMD2-209ENST00000489419 FAM83GA6ND36 823 aa11.15□□□□□ -0.63
CSMD2-209ENST00000489419 AMPHP49418 695 aa11.15□□□□□ -0.63
CSMD2-209ENST00000489419 PIK3C2AO00443 1686 aa11.15□□□□□ -0.63
CSMD2-209ENST00000489419 IGSF1Q8N6C5 1336 aa11.15□□□□□ -0.63
CSMD2-209ENST00000489419 RGPD8O14715 1765 aaPredicted RBP11.15□□□□□ -0.63
CSMD2-209ENST00000489419 SETD1BQ9UPS6 1966 aaKnown RBP11.14□□□□□ -0.63
CSMD2-209ENST00000489419 NLRP6P59044 892 aa11.14□□□□□ -0.63
CSMD2-209ENST00000489419 USP35Q9P2H5 1018 aa11.14□□□□□ -0.63
CSMD2-209ENST00000489419 GAS2L2Q8NHY3 880 aa11.14□□□□□ -0.63
CSMD2-209ENST00000489419 GCC1Q96CN9 775 aa11.14□□□□□ -0.63
CSMD2-209ENST00000489419 UPF2Q9HAU5 1272 aaKnown RBP11.14□□□□□ -0.63
CSMD2-209ENST00000489419 ADAMTSL3P82987 1691 aa11.13□□□□□ -0.63
CSMD2-209ENST00000489419 USP19O94966 1318 aa11.13□□□□□ -0.63
CSMD2-209ENST00000489419 CRB1P82279 1406 aa11.13□□□□□ -0.63
CSMD2-209ENST00000489419 NUCB1Q02818 461 aa11.13□□□□□ -0.63
CSMD2-209ENST00000489419 DCTN1Q14203 1278 aa11.13□□□□□ -0.63
CSMD2-209ENST00000489419 PHF8Q9UPP1 1060 aa11.13□□□□□ -0.63
CSMD2-209ENST00000489419 RTL1A6NKG5 1358 aa11.12□□□□□ -0.63
CSMD2-209ENST00000489419 SAMD1Q6SPF0 538 aaPredicted RBP11.12□□□□□ -0.63
CSMD2-209ENST00000489419 EYA1Q99502 592 aa11.12□□□□□ -0.63
CSMD2-209ENST00000489419 PTPRCP08575 1304 aa11.12□□□□□ -0.63
CSMD2-209ENST00000489419 INTS3Q68E01 1043 aaKnown RBP11.11□□□□□ -0.63
CSMD2-209ENST00000489419 RTF1Q92541 710 aaKnown RBP11.11□□□□□ -0.63
CSMD2-209ENST00000489419 BABAM1Q9NWV8 329 aa11.11□□□□□ -0.63
CSMD2-209ENST00000489419 SOS1Q07889 1333 aaPredicted RBP11.11□□□□□ -0.63
CSMD2-209ENST00000489419 ELL2O00472 640 aaPredicted RBP11.11□□□□□ -0.63
CSMD2-209ENST00000489419 HOXC9P31274 260 aa11.11□□□□□ -0.63
CSMD2-209ENST00000489419 ADGRL3Q9HAR2 1447 aa11.11□□□□□ -0.63
CSMD2-209ENST00000489419 MTHFSDQ2M296 383 aaKnown RBP11.1□□□□□ -0.63
CSMD2-209ENST00000489419 RTL5Q5HYW3 569 aaPredicted RBP11.1□□□□□ -0.63
CSMD2-209ENST00000489419 ABTB2Q8N961 1025 aa11.1□□□□□ -0.63
CSMD2-209ENST00000489419 MCM10Q7L590 875 aa11.1□□□□□ -0.63
CSMD2-209ENST00000489419 CHD1LQ86WJ1 897 aa11.09□□□□□ -0.63
CSMD2-209ENST00000489419 MARF1Q9Y4F3 1742 aaKnown RBP11.09□□□□□ -0.63
CSMD2-209ENST00000489419 SOX12O15370 315 aa11.09□□□□□ -0.63
CSMD2-209ENST00000489419 SEC24BO95487 1268 aa11.09□□□□□ -0.63
CSMD2-209ENST00000489419 BECN1Q14457 450 aa11.09□□□□□ -0.63
CSMD2-209ENST00000489419 TBC1D32Q96NH3 1257 aa11.09□□□□□ -0.63
CSMD2-209ENST00000489419 NPHP4O75161 1426 aaPredicted RBP11.08□□□□□ -0.64
CSMD2-209ENST00000489419 NBR1Q14596 966 aa11.08□□□□□ -0.64
CSMD2-209ENST00000489419 KCNH5Q8NCM2 988 aa11.08□□□□□ -0.64
CSMD2-209ENST00000489419 GNAT3A8MTJ3 354 aa11.07□□□□□ -0.64
CSMD2-209ENST00000489419 IP6K1Q92551 441 aa11.07□□□□□ -0.64
CSMD2-209ENST00000489419 RPAP2Q8IXW5 612 aaPredicted RBP11.07□□□□□ -0.64
CSMD2-209ENST00000489419 TSPYL4Q9UJ04 414 aa11.07□□□□□ -0.64
CSMD2-209ENST00000489419 NWD1Q149M9 1564 aa11.07□□□□□ -0.64
CSMD2-209ENST00000489419 NAP1L5Q96NT1 182 aaPredicted RBP11.06□□□□□ -0.64
CSMD2-209ENST00000489419 RGS12O14924 1447 aa11.06□□□□□ -0.64
CSMD2-209ENST00000489419 PSME1Q06323 249 aa11.06□□□□□ -0.64
CSMD2-209ENST00000489419 BMP2KLQ5H9B9 411 aa11.06□□□□□ -0.64
CSMD2-209ENST00000489419 SIRT2Q8IXJ6 389 aa11.06□□□□□ -0.64
CSMD2-209ENST00000489419 NAP1L2Q9ULW6 460 aaPredicted RBP11.06□□□□□ -0.64
CSMD2-209ENST00000489419 FOXO3O43524 673 aa11.05□□□□□ -0.64
CSMD2-209ENST00000489419 LRRC37A3O60309 1634 aa11.05□□□□□ -0.64
CSMD2-209ENST00000489419 PHRF1Q9P1Y6 1649 aaKnown RBP11.05□□□□□ -0.64
CSMD2-209ENST00000489419 NFAT5O94916 1531 aa11.05□□□□□ -0.64
CSMD2-209ENST00000489419 DCTPP1Q9H773 170 aa11.05□□□□□ -0.64
CSMD2-209ENST00000489419 MAP3K5Q99683 1374 aa11.04□□□□□ -0.64
CSMD2-209ENST00000489419 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
CSMD2-209ENST00000489419 ANKRD45Q5TZF3 282 aa11.04□□□□□ -0.64
CSMD2-209ENST00000489419 ANKRD44Q8N8A2 993 aa11.04□□□□□ -0.64
CSMD2-209ENST00000489419 LNPKQ9C0E8 428 aa11.04□□□□□ -0.64
CSMD2-209ENST00000489419 CCT4P50991 539 aaKnown RBP11.04□□□□□ -0.64
CSMD2-209ENST00000489419 TAF7Q15545 349 aaPredicted RBP11.04□□□□□ -0.64
CSMD2-209ENST00000489419 KRT24Q2M2I5 525 aa11.04□□□□□ -0.64
CSMD2-209ENST00000489419 ESCO1Q5FWF5 840 aa11.04□□□□□ -0.64
CSMD2-209ENST00000489419 NUTM2GQ5VZR2 741 aa11.04□□□□□ -0.64
CSMD2-209ENST00000489419 PCDH10Q9P2E7 1040 aa11.04□□□□□ -0.64
CSMD2-209ENST00000489419 KCNA4P22459 653 aa11.03□□□□□ -0.64
CSMD2-209ENST00000489419 SLC4A3P48751 1232 aa11.03□□□□□ -0.64
CSMD2-209ENST00000489419 CCDC30Q5VVM6 783 aa11.03□□□□□ -0.64
CSMD2-209ENST00000489419 STK31Q9BXU1 1019 aa11.03□□□□□ -0.64
CSMD2-209ENST00000489419 C22orf23Q9BZE7 217 aa11.03□□□□□ -0.64
CSMD2-209ENST00000489419 C14orf37Q86TY3 774 aa11.02□□□□□ -0.65
CSMD2-209ENST00000489419 C1orf115Q9H7X2 142 aa11.02□□□□□ -0.65
CSMD2-209ENST00000489419 IL17REQ8NFR9 667 aa11.01□□□□□ -0.65
CSMD2-209ENST00000489419 MSH6P52701 1360 aa11.01□□□□□ -0.65
CSMD2-209ENST00000489419 MST1RQ04912 1400 aa11.01□□□□□ -0.65
CSMD2-209ENST00000489419 MIS18AQ9NYP9 233 aa11.01□□□□□ -0.65
CSMD2-209ENST00000489419 LTN1O94822 1766 aa11.01□□□□□ -0.65
CSMD2-209ENST00000489419 CEMIPQ8WUJ3 1361 aa11.01□□□□□ -0.65
CSMD2-209ENST00000489419 CACNA1FO60840 1977 aa11□□□□□ -0.65
CSMD2-209ENST00000489419 ATP10DQ9P241 1426 aa11□□□□□ -0.65
CSMD2-209ENST00000489419 SLIT3O75094 1523 aa11□□□□□ -0.65
CSMD2-209ENST00000489419 HMMRO75330 724 aa11□□□□□ -0.65
CSMD2-209ENST00000489419 RBM25P49756 843 aaKnown RBP11□□□□□ -0.65
CSMD2-209ENST00000489419 CEP85Q6P2H3 762 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms