RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 COL6A3P12111 3177 aa11.86□□□□□ -0.51
EXOSC3-206ENST00000489414 VEGFAP15692 232 aaPredicted RBP11.85□□□□□ -0.51
EXOSC3-206ENST00000489414 KIF13BQ9NQT8 1826 aa11.84□□□□□ -0.51
EXOSC3-206ENST00000489414 LY75O60449 1722 aa11.84□□□□□ -0.51
EXOSC3-206ENST00000489414 KCNQ4P56696 695 aa11.84□□□□□ -0.51
EXOSC3-206ENST00000489414 MAP2K1Q02750 393 aaPredicted RBP11.84□□□□□ -0.51
EXOSC3-206ENST00000489414 BCS1LQ9Y276 419 aa11.84□□□□□ -0.51
EXOSC3-206ENST00000489414 BRCA1P38398 1863 aaKnown RBP11.84□□□□□ -0.51
EXOSC3-206ENST00000489414 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
EXOSC3-206ENST00000489414 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.51
EXOSC3-206ENST00000489414 ABCC6O95255 1503 aa11.83□□□□□ -0.52
EXOSC3-206ENST00000489414 SLC17A8Q8NDX2 589 aa11.83□□□□□ -0.52
EXOSC3-206ENST00000489414 USP54Q70EL1 1684 aa11.83□□□□□ -0.52
EXOSC3-206ENST00000489414 SPATA31E1Q6ZUB1 1445 aa11.83□□□□□ -0.52
EXOSC3-206ENST00000489414 PRR36Q9H6K5 1346 aa11.83□□□□□ -0.52
EXOSC3-206ENST00000489414 SBF1O95248 1867 aa11.83□□□□□ -0.52
EXOSC3-206ENST00000489414 ARFGEF1Q9Y6D6 1849 aa11.82□□□□□ -0.52
EXOSC3-206ENST00000489414 EXOC5O00471 708 aa11.82□□□□□ -0.52
EXOSC3-206ENST00000489414 SOX10P56693 466 aa11.82□□□□□ -0.52
EXOSC3-206ENST00000489414 NUTM2GQ5VZR2 741 aa11.82□□□□□ -0.52
EXOSC3-206ENST00000489414 TOM1L2Q6ZVM7 507 aa11.82□□□□□ -0.52
EXOSC3-206ENST00000489414 MPNDQ8N594 471 aa11.81□□□□□ -0.52
EXOSC3-206ENST00000489414 SIRT1Q96EB6 747 aa11.81□□□□□ -0.52
EXOSC3-206ENST00000489414 RNF181Q9P0P0 153 aa11.81□□□□□ -0.52
EXOSC3-206ENST00000489414 YTHDC2Q9H6S0 1430 aaKnown RBP11.8□□□□□ -0.52
EXOSC3-206ENST00000489414 THSD7BQ9C0I4 1608 aa11.8□□□□□ -0.52
EXOSC3-206ENST00000489414 RPGRIP1LQ68CZ1 1315 aa11.8□□□□□ -0.52
EXOSC3-206ENST00000489414 ZC3H4Q9UPT8 1303 aaKnown RBP11.79□□□□□ -0.52
EXOSC3-206ENST00000489414 MKI67P46013 3256 aaKnown RBP11.78□□□□□ -0.52
EXOSC3-206ENST00000489414 LTBP1Q14766 1721 aa11.78□□□□□ -0.52
EXOSC3-206ENST00000489414 ITSN1Q15811 1721 aa11.78□□□□□ -0.52
EXOSC3-206ENST00000489414 CASP8AP2Q9UKL3 1982 aa11.78□□□□□ -0.52
EXOSC3-206ENST00000489414 NGDNQ8NEJ9 315 aaKnown RBP11.78□□□□□ -0.52
EXOSC3-206ENST00000489414 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
EXOSC3-206ENST00000489414 WDR17Q8IZU2 1322 aa11.78□□□□□ -0.52
EXOSC3-206ENST00000489414 VPS8Q8N3P4 1428 aa11.77□□□□□ -0.52
EXOSC3-206ENST00000489414 TMEM132EQ6IEE7 984 aa11.77□□□□□ -0.53
EXOSC3-206ENST00000489414 PASKQ96RG2 1323 aa11.77□□□□□ -0.53
EXOSC3-206ENST00000489414 GLTPD2A6NH11 291 aa11.76□□□□□ -0.53
EXOSC3-206ENST00000489414 NBPF15Q8N660 670 aa11.76□□□□□ -0.53
EXOSC3-206ENST00000489414 NUP155O75694 1391 aa11.76□□□□□ -0.53
EXOSC3-206ENST00000489414 POTECB2RU33 542 aa11.75□□□□□ -0.53
EXOSC3-206ENST00000489414 FCHSD2O94868 740 aa11.75□□□□□ -0.53
EXOSC3-206ENST00000489414 DGKZQ13574 1117 aa11.75□□□□□ -0.53
EXOSC3-206ENST00000489414 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
EXOSC3-206ENST00000489414 MEGF6O75095 1541 aa11.75□□□□□ -0.53
EXOSC3-206ENST00000489414 RASSF10A6NK89 507 aa11.74□□□□□ -0.53
EXOSC3-206ENST00000489414 GCP02774 474 aa11.74□□□□□ -0.53
EXOSC3-206ENST00000489414 TGFB2P61812 414 aa11.74□□□□□ -0.53
EXOSC3-206ENST00000489414 WDR33Q9C0J8 1336 aaKnown RBP11.74□□□□□ -0.53
EXOSC3-206ENST00000489414 A0A0G2JLW4 131 aa11.73□□□□□ -0.53
EXOSC3-206ENST00000489414 TMEM88BA6NKF7 163 aa11.73□□□□□ -0.53
EXOSC3-206ENST00000489414 C5P01031 1676 aa11.73□□□□□ -0.53
EXOSC3-206ENST00000489414 FLAD1Q8NFF5 587 aa11.73□□□□□ -0.53
EXOSC3-206ENST00000489414 CARD10Q9BWT7 1032 aa11.73□□□□□ -0.53
EXOSC3-206ENST00000489414 KDM6AO15550 1401 aaPredicted RBP11.72□□□□□ -0.53
EXOSC3-206ENST00000489414 PPIP5K1Q6PFW1 1433 aa11.72□□□□□ -0.53
EXOSC3-206ENST00000489414 EIF3AQ14152 1382 aaKnown RBP11.72□□□□□ -0.53
EXOSC3-206ENST00000489414 ADGRF5Q8IZF2 1346 aa11.72□□□□□ -0.53
EXOSC3-206ENST00000489414 BEGAINQ9BUH8 593 aa11.72□□□□□ -0.53
EXOSC3-206ENST00000489414 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
EXOSC3-206ENST00000489414 TOGARAM1Q9Y4F4 1720 aa11.72□□□□□ -0.53
EXOSC3-206ENST00000489414 SAFB2Q14151 953 aaKnown RBP eCLIP11.71□□□□□ -0.53
EXOSC3-206ENST00000489414 KANK4Q5T7N3 995 aaPredicted RBP11.71□□□□□ -0.53
EXOSC3-206ENST00000489414 CCNL1Q9UK58 526 aaPredicted RBP11.71□□□□□ -0.53
EXOSC3-206ENST00000489414 ERBB3P21860 1342 aa11.7□□□□□ -0.54
EXOSC3-206ENST00000489414 TIAM2Q8IVF5 1701 aa11.7□□□□□ -0.54
EXOSC3-206ENST00000489414 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
EXOSC3-206ENST00000489414 DEFB115Q30KQ5 88 aa11.7□□□□□ -0.54
EXOSC3-206ENST00000489414 DCAF5Q96JK2 942 aa11.7□□□□□ -0.54
EXOSC3-206ENST00000489414 PRAM1Q96QH2 718 aa11.7□□□□□ -0.54
EXOSC3-206ENST00000489414 UNC80Q8N2C7 3258 aa11.7□□□□□ -0.54
EXOSC3-206ENST00000489414 POLA2Q14181 598 aa11.69□□□□□ -0.54
EXOSC3-206ENST00000489414 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
EXOSC3-206ENST00000489414 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
EXOSC3-206ENST00000489414 CCDC7Q96M83 1385 aa11.68□□□□□ -0.54
EXOSC3-206ENST00000489414 TAF1LQ8IZX4 1826 aa11.68□□□□□ -0.54
EXOSC3-206ENST00000489414 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
EXOSC3-206ENST00000489414 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
EXOSC3-206ENST00000489414 DPEP1P16444 411 aa11.68□□□□□ -0.54
EXOSC3-206ENST00000489414 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
EXOSC3-206ENST00000489414 ABTB2Q8N961 1025 aa11.68□□□□□ -0.54
EXOSC3-206ENST00000489414 NSD2O96028 1365 aa11.67□□□□□ -0.54
EXOSC3-206ENST00000489414 RGPD5Q99666 1765 aa11.67□□□□□ -0.54
EXOSC3-206ENST00000489414 PIK3C2GO75747 1445 aa11.67□□□□□ -0.54
EXOSC3-206ENST00000489414 UBR3Q6ZT12 1888 aa11.66□□□□□ -0.54
EXOSC3-206ENST00000489414 ZBTB7CA1YPR0 619 aa11.66□□□□□ -0.54
EXOSC3-206ENST00000489414 KCNA3P22001 575 aa11.66□□□□□ -0.54
EXOSC3-206ENST00000489414 AMIGO3Q86WK7 504 aa11.66□□□□□ -0.54
EXOSC3-206ENST00000489414 VCANP13611 3396 aa11.66□□□□□ -0.54
EXOSC3-206ENST00000489414 SLIT3O75094 1523 aa11.65□□□□□ -0.54
EXOSC3-206ENST00000489414 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
EXOSC3-206ENST00000489414 TRIOBPQ9H2D6 2365 aa11.65□□□□□ -0.54
EXOSC3-206ENST00000489414 POLR3AO14802 1390 aaPredicted RBP11.65□□□□□ -0.55
EXOSC3-206ENST00000489414 NLRP13Q86W25 1043 aa11.64□□□□□ -0.55
EXOSC3-206ENST00000489414 DOT1LQ8TEK3 1739 aa11.63□□□□□ -0.55
EXOSC3-206ENST00000489414 CA12O43570 354 aa11.63□□□□□ -0.55
EXOSC3-206ENST00000489414 ITGBL1O95965 494 aaPredicted RBP11.63□□□□□ -0.55
EXOSC3-206ENST00000489414 C4BP0C0L5 1744 aa11.63□□□□□ -0.55
EXOSC3-206ENST00000489414 ANKRD36BQ8N2N9 1353 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms