RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 PLEKHO1Q53GL0 409 aaPredicted RBP13.03□□□□□ -0.32
FDPS-214ENST00000489324 TNS2Q63HR2 1409 aa13.03□□□□□ -0.32
FDPS-214ENST00000489324 NEFMP07197 916 aa13.01□□□□□ -0.33
FDPS-214ENST00000489324 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
FDPS-214ENST00000489324 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
FDPS-214ENST00000489324 PCDH11XQ9BZA7 1347 aa13.01□□□□□ -0.33
FDPS-214ENST00000489324 PCDH11YQ9BZA8 1340 aa13.01□□□□□ -0.33
FDPS-214ENST00000489324 BCL9O00512 1426 aa13.01□□□□□ -0.33
FDPS-214ENST00000489324 MEGF6O75095 1541 aa13.01□□□□□ -0.33
FDPS-214ENST00000489324 RGPD1P0DJD0 1748 aa13.01□□□□□ -0.33
FDPS-214ENST00000489324 PARP4Q9UKK3 1724 aaKnown RBP13.01□□□□□ -0.33
FDPS-214ENST00000489324 CCER2I3L3R5 266 aa13□□□□□ -0.33
FDPS-214ENST00000489324 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
FDPS-214ENST00000489324 HSP90AB1P08238 724 aaKnown RBP12.99□□□□□ -0.33
FDPS-214ENST00000489324 HMOX1P09601 288 aa12.99□□□□□ -0.33
FDPS-214ENST00000489324 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
FDPS-214ENST00000489324 ILDR2Q71H61 639 aa12.98□□□□□ -0.33
FDPS-214ENST00000489324 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
FDPS-214ENST00000489324 MARCH10Q8NA82 808 aaPredicted RBP12.98□□□□□ -0.33
FDPS-214ENST00000489324 GAS2L2Q8NHY3 880 aa12.98□□□□□ -0.33
FDPS-214ENST00000489324 MRS2Q9HD23 443 aa12.98□□□□□ -0.33
FDPS-214ENST00000489324 WNK3Q9BYP7 1800 aa12.97□□□□□ -0.33
FDPS-214ENST00000489324 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
FDPS-214ENST00000489324 NKX1-1Q15270 411 aaPredicted RBP12.97□□□□□ -0.33
FDPS-214ENST00000489324 CCDC125Q86Z20 511 aa12.97□□□□□ -0.33
FDPS-214ENST00000489324 DDX54Q8TDD1 881 aaKnown RBP12.97□□□□□ -0.33
FDPS-214ENST00000489324 LRRC37A3O60309 1634 aa12.97□□□□□ -0.33
FDPS-214ENST00000489324 C1orf141Q5JVX7 400 aa12.96□□□□□ -0.33
FDPS-214ENST00000489324 RGPD2P0DJD1 1756 aa12.96□□□□□ -0.34
FDPS-214ENST00000489324 CYP27B1O15528 508 aa12.95□□□□□ -0.34
FDPS-214ENST00000489324 PHKG2P15735 406 aa12.95□□□□□ -0.34
FDPS-214ENST00000489324 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
FDPS-214ENST00000489324 ZNF530Q6P9A1 599 aaPredicted RBP12.95□□□□□ -0.34
FDPS-214ENST00000489324 PNISRQ8TF01 805 aaKnown RBP12.95□□□□□ -0.34
FDPS-214ENST00000489324 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
FDPS-214ENST00000489324 RUNDC1Q96C34 613 aa12.94□□□□□ -0.34
FDPS-214ENST00000489324 DCAF5Q96JK2 942 aa12.94□□□□□ -0.34
FDPS-214ENST00000489324 PLEKHF1Q96S99 279 aa12.94□□□□□ -0.34
FDPS-214ENST00000489324 ADAMTS8Q9UP79 889 aa12.94□□□□□ -0.34
FDPS-214ENST00000489324 PKD1L3Q7Z443 1732 aa12.93□□□□□ -0.34
FDPS-214ENST00000489324 HTATSF1O43719 755 aaKnown RBP12.93□□□□□ -0.34
FDPS-214ENST00000489324 MTHFSDQ2M296 383 aaKnown RBP12.93□□□□□ -0.34
FDPS-214ENST00000489324 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
FDPS-214ENST00000489324 BCL11BQ9C0K0 894 aaPredicted RBP12.92□□□□□ -0.34
FDPS-214ENST00000489324 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
FDPS-214ENST00000489324 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
FDPS-214ENST00000489324 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
FDPS-214ENST00000489324 PHACTR3Q96KR7 559 aa12.91□□□□□ -0.34
FDPS-214ENST00000489324 BRWD3Q6RI45 1802 aa12.9□□□□□ -0.34
FDPS-214ENST00000489324 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.34
FDPS-214ENST00000489324 LMOD3Q0VAK6 560 aa12.9□□□□□ -0.34
FDPS-214ENST00000489324 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
FDPS-214ENST00000489324 FAM182BQ5T319 152 aa12.9□□□□□ -0.34
FDPS-214ENST00000489324 MAP3K5Q99683 1374 aa12.9□□□□□ -0.34
FDPS-214ENST00000489324 HMGB2P26583 209 aaKnown RBP12.89□□□□□ -0.35
FDPS-214ENST00000489324 MIER1Q8N108 512 aa12.89□□□□□ -0.35
FDPS-214ENST00000489324 RTF1Q92541 710 aaKnown RBP12.89□□□□□ -0.35
FDPS-214ENST00000489324 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.35
FDPS-214ENST00000489324 SOCS7O14512 581 aa12.88□□□□□ -0.35
FDPS-214ENST00000489324 RNMTO43148 476 aaKnown RBP12.88□□□□□ -0.35
FDPS-214ENST00000489324 TRIM37O94972 964 aa12.88□□□□□ -0.35
FDPS-214ENST00000489324 NGEFQ8N5V2 710 aa12.88□□□□□ -0.35
FDPS-214ENST00000489324 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
FDPS-214ENST00000489324 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
FDPS-214ENST00000489324 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
FDPS-214ENST00000489324 SHANK3Q9BYB0 1731 aa12.87□□□□□ -0.35
FDPS-214ENST00000489324 PLSCR1O15162 318 aa12.86□□□□□ -0.35
FDPS-214ENST00000489324 BAG6P46379 1132 aa12.86□□□□□ -0.35
FDPS-214ENST00000489324 RIPK4P57078 832 aa12.86□□□□□ -0.35
FDPS-214ENST00000489324 CABP4P57796 275 aa12.86□□□□□ -0.35
FDPS-214ENST00000489324 MPRIPQ6WCQ1 1025 aa12.86□□□□□ -0.35
FDPS-214ENST00000489324 CCDC146Q8IYE0 955 aa12.86□□□□□ -0.35
FDPS-214ENST00000489324 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
FDPS-214ENST00000489324 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
FDPS-214ENST00000489324 KDM6AO15550 1401 aaPredicted RBP12.86□□□□□ -0.35
FDPS-214ENST00000489324 CEMIPQ8WUJ3 1361 aa12.85□□□□□ -0.35
FDPS-214ENST00000489324 APBA3O96018 575 aa12.85□□□□□ -0.35
FDPS-214ENST00000489324 FAM9BQ8IZU0 186 aa12.85□□□□□ -0.35
FDPS-214ENST00000489324 SYTL4Q96C24 671 aaPredicted RBP12.85□□□□□ -0.35
FDPS-214ENST00000489324 SLC52A2Q9HAB3 445 aa12.85□□□□□ -0.35
FDPS-214ENST00000489324 KCNQ2O43526 872 aa12.84□□□□□ -0.35
FDPS-214ENST00000489324 TEFQ10587 303 aa12.84□□□□□ -0.35
FDPS-214ENST00000489324 IL17REQ8NFR9 667 aa12.84□□□□□ -0.35
FDPS-214ENST00000489324 LGR6Q9HBX8 967 aa12.84□□□□□ -0.35
FDPS-214ENST00000489324 NHSQ6T4R5 1651 aa12.83□□□□□ -0.35
FDPS-214ENST00000489324 APAF1O14727 1248 aa12.83□□□□□ -0.36
FDPS-214ENST00000489324 CALD1Q05682 793 aaKnown RBP12.83□□□□□ -0.36
FDPS-214ENST00000489324 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
FDPS-214ENST00000489324 PIGBQ92521 554 aa12.83□□□□□ -0.36
FDPS-214ENST00000489324 BABAM1Q9NWV8 329 aa12.83□□□□□ -0.36
FDPS-214ENST00000489324 NFATC2IPQ8NCF5 419 aa12.82□□□□□ -0.36
FDPS-214ENST00000489324 MRC1P22897 1456 aa12.82□□□□□ -0.36
FDPS-214ENST00000489324 ADAMTS7Q9UKP4 1686 aa12.82□□□□□ -0.36
FDPS-214ENST00000489324 SLC27A3Q5K4L6 730 aa12.81□□□□□ -0.36
FDPS-214ENST00000489324 TAF7Q15545 349 aaPredicted RBP12.8□□□□□ -0.36
FDPS-214ENST00000489324 NEUROD2Q15784 382 aa12.8□□□□□ -0.36
FDPS-214ENST00000489324 MCM10Q7L590 875 aa12.8□□□□□ -0.36
FDPS-214ENST00000489324 CAMKK2Q96RR4 588 aa12.8□□□□□ -0.36
FDPS-214ENST00000489324 DOT1LQ8TEK3 1739 aa12.79□□□□□ -0.36
FDPS-214ENST00000489324 SBF2Q86WG5 1849 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms