RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
CCL20-204ENST00000489160 USP4Q13107 963 aa9.18□□□□□ -0.94
CCL20-204ENST00000489160 LARP1Q6PKG0 1096 aaKnown RBP9.18□□□□□ -0.94
CCL20-204ENST00000489160 Q6ZNB5 142 aa9.18□□□□□ -0.94
CCL20-204ENST00000489160 NR3C2P08235 984 aa9.17□□□□□ -0.94
CCL20-204ENST00000489160 RASA1P20936 1047 aa9.17□□□□□ -0.94
CCL20-204ENST00000489160 ATP1A2P50993 1020 aa9.17□□□□□ -0.94
CCL20-204ENST00000489160 CRIPAKQ8N1N5 446 aa9.17□□□□□ -0.94
CCL20-204ENST00000489160 CDCA7Q9BWT1 371 aaPredicted RBP9.17□□□□□ -0.94
CCL20-204ENST00000489160 PGPEP1Q9NXJ5 209 aa9.17□□□□□ -0.94
CCL20-204ENST00000489160 USP17L15C9J2P7 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 USP17L10C9JJH3 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 USP17L13C9JLJ4 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 USP17L12C9JPN9 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 USP17L11C9JVI0 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 USP17L21D6R901 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 USP17L18D6R9N7 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 USP17L22D6RA61 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 USP17L17D6RBQ6 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 USP17L19D6RCP7 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 USP17L20D6RJB6 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 ERVH48-1M5A8F1 160 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 WDR4P57081 412 aaKnown RBP9.16□□□□□ -0.94
CCL20-204ENST00000489160 MYT1Q01538 1121 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 USP17L24Q0WX57 530 aa9.16□□□□□ -0.94
CCL20-204ENST00000489160 CRTC2Q53ET0 693 aaPredicted RBP9.16□□□□□ -0.94
CCL20-204ENST00000489160 PPP1R26Q5T8A7 1209 aaPredicted RBP9.16□□□□□ -0.94
CCL20-204ENST00000489160 KLF16Q9BXK1 252 aaPredicted RBP9.16□□□□□ -0.94
CCL20-204ENST00000489160 PTK7Q13308 1070 aa9.15□□□□□ -0.94
CCL20-204ENST00000489160 OGFOD1Q8N543 542 aa9.15□□□□□ -0.94
CCL20-204ENST00000489160 DNAAF2Q9NVR5 837 aaKnown RBP9.15□□□□□ -0.94
CCL20-204ENST00000489160 NOVA2Q9UNW9 492 aaKnown RBP9.15□□□□□ -0.94
CCL20-204ENST00000489160 AXIN1O15169 862 aa9.14□□□□□ -0.95
CCL20-204ENST00000489160 CAPN5O15484 640 aaPredicted RBP9.14□□□□□ -0.95
CCL20-204ENST00000489160 ZIC2O95409 532 aaPredicted RBP9.14□□□□□ -0.95
CCL20-204ENST00000489160 MYCP01106 439 aaPredicted RBP9.14□□□□□ -0.95
CCL20-204ENST00000489160 TIMP2P16035 220 aa9.14□□□□□ -0.95
CCL20-204ENST00000489160 GTF2IP78347 998 aa9.14□□□□□ -0.95
CCL20-204ENST00000489160 LARGE2Q8N3Y3 721 aa9.14□□□□□ -0.95
CCL20-204ENST00000489160 CLDN10P78369 228 aa9.13□□□□□ -0.95
CCL20-204ENST00000489160 ITPKCQ96DU7 683 aa9.13□□□□□ -0.95
CCL20-204ENST00000489160 ESF1Q9H501 851 aaKnown RBP9.13□□□□□ -0.95
CCL20-204ENST00000489160 AAASQ9NRG9 546 aa9.13□□□□□ -0.95
CCL20-204ENST00000489160 ZMIZ1Q9ULJ6 1067 aa9.13□□□□□ -0.95
CCL20-204ENST00000489160 ERVK-9P63128 1117 aa9.12□□□□□ -0.95
CCL20-204ENST00000489160 ANKMY2Q8IV38 441 aa9.12□□□□□ -0.95
CCL20-204ENST00000489160 TMEM88BA6NKF7 163 aa9.11□□□□□ -0.95
CCL20-204ENST00000489160 CC2D2BQ6DHV5 1058 aa9.11□□□□□ -0.95
CCL20-204ENST00000489160 SIX5Q8N196 739 aa9.11□□□□□ -0.95
CCL20-204ENST00000489160 FAM200AQ8TCP9 573 aa9.11□□□□□ -0.95
CCL20-204ENST00000489160 STK32AQ8WU08 396 aa9.11□□□□□ -0.95
CCL20-204ENST00000489160 ZNF594Q96JF6 807 aaPredicted RBP9.11□□□□□ -0.95
CCL20-204ENST00000489160 TMPRSS4Q9NRS4 437 aa9.11□□□□□ -0.95
CCL20-204ENST00000489160 PCDHGA11Q9Y5H2 935 aa9.11□□□□□ -0.95
CCL20-204ENST00000489160 ZBTB7BO15156 539 aaPredicted RBP9.1□□□□□ -0.95
CCL20-204ENST00000489160 SCTRP47872 440 aa9.1□□□□□ -0.95
CCL20-204ENST00000489160 PSME1Q06323 249 aa9.1□□□□□ -0.95
CCL20-204ENST00000489160 TMEM164Q5U3C3 297 aa9.1□□□□□ -0.95
CCL20-204ENST00000489160 KCTD17Q8N5Z5 321 aa9.1□□□□□ -0.95
CCL20-204ENST00000489160 ZFAND3Q9H8U3 227 aa9.1□□□□□ -0.95
CCL20-204ENST00000489160 RBM19Q9Y4C8 960 aaKnown RBP9.1□□□□□ -0.95
CCL20-204ENST00000489160 DPYDQ12882 1025 aa9.09□□□□□ -0.95
CCL20-204ENST00000489160 CCDC102BQ68D86 513 aa9.09□□□□□ -0.95
CCL20-204ENST00000489160 ZNF784Q8NCA9 323 aaPredicted RBP9.09□□□□□ -0.95
CCL20-204ENST00000489160 CYLDQ9NQC7 956 aa9.09□□□□□ -0.95
CCL20-204ENST00000489160 KIAA1024Q9UPX6 916 aa9.09□□□□□ -0.95
CCL20-204ENST00000489160 ST8SIA5O15466 376 aa9.08□□□□□ -0.96
CCL20-204ENST00000489160 DKK1O94907 266 aa9.07□□□□□ -0.96
CCL20-204ENST00000489160 SEC13P55735 322 aa9.07□□□□□ -0.96
CCL20-204ENST00000489160 Q6ZVU0 165 aa9.07□□□□□ -0.96
CCL20-204ENST00000489160 TPCN2Q8NHX9 752 aa9.07□□□□□ -0.96
CCL20-204ENST00000489160 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
CCL20-204ENST00000489160 CARNS1A5YM72 827 aa9.06□□□□□ -0.96
CCL20-204ENST00000489160 LILRA1O75019 489 aa9.06□□□□□ -0.96
CCL20-204ENST00000489160 BRD1O95696 1058 aa9.06□□□□□ -0.96
CCL20-204ENST00000489160 SWI5Q1ZZU3 235 aa9.06□□□□□ -0.96
CCL20-204ENST00000489160 MEIOBQ8N635 442 aa9.06□□□□□ -0.96
CCL20-204ENST00000489160 ZBTB7CA1YPR0 619 aa9.05□□□□□ -0.96
CCL20-204ENST00000489160 UPP2O95045 317 aa9.05□□□□□ -0.96
CCL20-204ENST00000489160 ADD1P35611 737 aaKnown RBP9.05□□□□□ -0.96
CCL20-204ENST00000489160 CBLBQ13191 982 aa9.05□□□□□ -0.96
CCL20-204ENST00000489160 SCARF1Q14162 830 aa9.05□□□□□ -0.96
CCL20-204ENST00000489160 B4GALNT3Q6L9W6 998 aa9.05□□□□□ -0.96
CCL20-204ENST00000489160 CYP2U1Q7Z449 544 aa9.05□□□□□ -0.96
CCL20-204ENST00000489160 TSEN34Q9BSV6 310 aaKnown RBP9.05□□□□□ -0.96
CCL20-204ENST00000489160 LCE2BO14633 110 aa9.04□□□□□ -0.96
CCL20-204ENST00000489160 ADH1AP07327 375 aa9.04□□□□□ -0.96
CCL20-204ENST00000489160 FAM69CQ0P6D2 419 aa9.04□□□□□ -0.96
CCL20-204ENST00000489160 TRIM26Q12899 539 aaPredicted RBP9.04□□□□□ -0.96
CCL20-204ENST00000489160 MRPL14Q6P1L8 145 aaKnown RBP9.04□□□□□ -0.96
CCL20-204ENST00000489160 AEBP1Q8IUX7 1158 aa9.04□□□□□ -0.96
CCL20-204ENST00000489160 ATP13A2Q9NQ11 1180 aa9.04□□□□□ -0.96
CCL20-204ENST00000489160 PATL2C9JE40 543 aaKnown RBP9.03□□□□□ -0.96
CCL20-204ENST00000489160 CLP1Q92989 425 aaKnown RBP9.03□□□□□ -0.96
CCL20-204ENST00000489160 SFI1A8K8P3 1242 aa9.02□□□□□ -0.97
CCL20-204ENST00000489160 M0R2N6 131 aa9.02□□□□□ -0.97
CCL20-204ENST00000489160 GNRH1P01148 92 aa9.02□□□□□ -0.97
CCL20-204ENST00000489160 TRIM46Q7Z4K8 759 aa9.02□□□□□ -0.97
CCL20-204ENST00000489160 SENP2Q9HC62 589 aa9.02□□□□□ -0.97
CCL20-204ENST00000489160 DACH1Q9UI36 760 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms