RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 NSD2O96028 1365 aa9.5□□□□□ -0.89
BEST3-205ENST00000488961 NOL8Q76FK4 1167 aaKnown RBP9.5□□□□□ -0.89
BEST3-205ENST00000488961 MEIS3Q99687 375 aa9.5□□□□□ -0.89
BEST3-205ENST00000488961 NEURL4Q96JN8 1562 aa9.5□□□□□ -0.89
BEST3-205ENST00000488961 ZBTB7BO15156 539 aaPredicted RBP9.49□□□□□ -0.89
BEST3-205ENST00000488961 TMEM51Q9NW97 253 aa9.49□□□□□ -0.89
BEST3-205ENST00000488961 EIF2S2P20042 333 aaKnown RBP9.49□□□□□ -0.89
BEST3-205ENST00000488961 FOXD4L5Q5VV16 416 aaPredicted RBP9.49□□□□□ -0.89
BEST3-205ENST00000488961 ABTB2Q8N961 1025 aa9.49□□□□□ -0.89
BEST3-205ENST00000488961 FOXD4L4Q8WXT5 416 aaPredicted RBP9.49□□□□□ -0.89
BEST3-205ENST00000488961 CHAMP1Q96JM3 812 aa9.49□□□□□ -0.89
BEST3-205ENST00000488961 FAM135BQ49AJ0 1406 aa9.49□□□□□ -0.89
BEST3-205ENST00000488961 GNAI1P63096 354 aa9.49□□□□□ -0.89
BEST3-205ENST00000488961 CHD1LQ86WJ1 897 aa9.49□□□□□ -0.89
BEST3-205ENST00000488961 LRRC59Q96AG4 307 aaKnown RBP9.49□□□□□ -0.89
BEST3-205ENST00000488961 PTPRUQ92729 1446 aa9.48□□□□□ -0.89
BEST3-205ENST00000488961 IPO8O15397 1037 aaKnown RBP9.48□□□□□ -0.89
BEST3-205ENST00000488961 DHX37Q8IY37 1157 aaKnown RBP9.48□□□□□ -0.89
BEST3-205ENST00000488961 TSPYL4Q9UJ04 414 aa9.48□□□□□ -0.89
BEST3-205ENST00000488961 NRXN3Q9Y4C0 1643 aa9.48□□□□□ -0.89
BEST3-205ENST00000488961 NGEFQ8N5V2 710 aa9.48□□□□□ -0.89
BEST3-205ENST00000488961 TBC1D32Q96NH3 1257 aa9.48□□□□□ -0.89
BEST3-205ENST00000488961 EYA1Q99502 592 aa9.48□□□□□ -0.89
BEST3-205ENST00000488961 EXOC6BQ9Y2D4 811 aa9.48□□□□□ -0.89
BEST3-205ENST00000488961 EID1Q9Y6B2 187 aa9.48□□□□□ -0.89
BEST3-205ENST00000488961 TMEM2Q9UHN6 1383 aa9.47□□□□□ -0.89
BEST3-205ENST00000488961 ADGRB2O60241 1585 aa9.47□□□□□ -0.89
BEST3-205ENST00000488961 KIF16BQ96L93 1317 aa9.47□□□□□ -0.89
BEST3-205ENST00000488961 FSD2A1L4K1 749 aa9.47□□□□□ -0.89
BEST3-205ENST00000488961 MAP4K4O95819 1239 aaPredicted RBP9.47□□□□□ -0.89
BEST3-205ENST00000488961 MED14O60244 1454 aa9.47□□□□□ -0.89
BEST3-205ENST00000488961 ZFYVE9O95405 1425 aa9.47□□□□□ -0.89
BEST3-205ENST00000488961 PNPLA6Q8IY17 1366 aa9.47□□□□□ -0.89
BEST3-205ENST00000488961 PPP4R3BQ5MIZ7 849 aa9.47□□□□□ -0.89
BEST3-205ENST00000488961 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.47□□□□□ -0.89
BEST3-205ENST00000488961 CFAP44Q96MT7 982 aa9.47□□□□□ -0.89
BEST3-205ENST00000488961 ZFP91Q96JP5 570 aaPredicted RBP9.46□□□□□ -0.89
BEST3-205ENST00000488961 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.46□□□□□ -0.9
BEST3-205ENST00000488961 EDC4Q6P2E9 1401 aaKnown RBP9.46□□□□□ -0.9
BEST3-205ENST00000488961 FOXD4L6Q3SYB3 417 aaPredicted RBP9.46□□□□□ -0.9
BEST3-205ENST00000488961 FOXD4L3Q6VB84 417 aaPredicted RBP9.46□□□□□ -0.9
BEST3-205ENST00000488961 ANP32BQ92688 251 aaKnown RBP9.46□□□□□ -0.9
BEST3-205ENST00000488961 KCNQ3O43525 872 aa9.45□□□□□ -0.9
BEST3-205ENST00000488961 PIP4K2AP48426 406 aaPredicted RBP9.45□□□□□ -0.9
BEST3-205ENST00000488961 ESCO1Q5FWF5 840 aa9.45□□□□□ -0.9
BEST3-205ENST00000488961 RTF1Q92541 710 aaKnown RBP9.45□□□□□ -0.9
BEST3-205ENST00000488961 ATP7BP35670 1465 aa9.45□□□□□ -0.9
BEST3-205ENST00000488961 CPSF1Q10570 1443 aaKnown RBP9.45□□□□□ -0.9
BEST3-205ENST00000488961 USP32Q8NFA0 1604 aa9.45□□□□□ -0.9
BEST3-205ENST00000488961 NUCB1Q02818 461 aa9.45□□□□□ -0.9
BEST3-205ENST00000488961 MSH6P52701 1360 aa9.45□□□□□ -0.9
BEST3-205ENST00000488961 DMTNQ08495 405 aa9.45□□□□□ -0.9
BEST3-205ENST00000488961 MAPK8IP2Q13387 824 aaPredicted RBP9.45□□□□□ -0.9
BEST3-205ENST00000488961 BECN1Q14457 450 aa9.45□□□□□ -0.9
BEST3-205ENST00000488961 TBC1D9Q6ZT07 1266 aa9.45□□□□□ -0.9
BEST3-205ENST00000488961 SMC5Q8IY18 1101 aa9.45□□□□□ -0.9
BEST3-205ENST00000488961 IFT57Q9NWB7 429 aa9.45□□□□□ -0.9
BEST3-205ENST00000488961 ADAMTS13Q76LX8 1427 aa9.44□□□□□ -0.9
BEST3-205ENST00000488961 GSPT1P15170 499 aaKnown RBP9.44□□□□□ -0.9
BEST3-205ENST00000488961 PUS7Q96PZ0 661 aaKnown RBP9.44□□□□□ -0.9
BEST3-205ENST00000488961 ORAI2Q96SN7 254 aa9.44□□□□□ -0.9
BEST3-205ENST00000488961 FKBP5Q13451 457 aaPredicted RBP9.44□□□□□ -0.9
BEST3-205ENST00000488961 TRIM44Q96DX7 344 aaPredicted RBP9.44□□□□□ -0.9
BEST3-205ENST00000488961 PHAXQ9H814 394 aaKnown RBP9.44□□□□□ -0.9
BEST3-205ENST00000488961 LGR6Q9HBX8 967 aa9.44□□□□□ -0.9
BEST3-205ENST00000488961 SETD1AO15047 1707 aaKnown RBP9.44□□□□□ -0.9
BEST3-205ENST00000488961 DLC1Q96QB1 1528 aa9.44□□□□□ -0.9
BEST3-205ENST00000488961 NINLQ9Y2I6 1382 aa9.43□□□□□ -0.9
BEST3-205ENST00000488961 PRAMEF22A3QJZ6 481 aa9.43□□□□□ -0.9
BEST3-205ENST00000488961 HDAC1Q13547 482 aaPredicted RBP9.43□□□□□ -0.9
BEST3-205ENST00000488961 LARP6Q9BRS8 491 aaKnown RBP9.43□□□□□ -0.9
BEST3-205ENST00000488961 IL1RAPL2Q9NP60 686 aa9.43□□□□□ -0.9
BEST3-205ENST00000488961 ZBTB22O15209 634 aa9.43□□□□□ -0.9
BEST3-205ENST00000488961 ZNF853P0CG23 659 aa9.43□□□□□ -0.9
BEST3-205ENST00000488961 MPRIPQ6WCQ1 1025 aa9.43□□□□□ -0.9
BEST3-205ENST00000488961 JARID2Q92833 1246 aaPredicted RBP9.43□□□□□ -0.9
BEST3-205ENST00000488961 ANKRD26Q9UPS8 1709 aa9.43□□□□□ -0.9
BEST3-205ENST00000488961 KAT6BQ8WYB5 2073 aa9.43□□□□□ -0.9
BEST3-205ENST00000488961 HDGFP51858 240 aaKnown RBP9.42□□□□□ -0.9
BEST3-205ENST00000488961 SPATA31D1Q6ZQQ2 1576 aa9.42□□□□□ -0.9
BEST3-205ENST00000488961 HSP90AB1P08238 724 aaKnown RBP9.42□□□□□ -0.9
BEST3-205ENST00000488961 ZC3H6P61129 1189 aaKnown RBP9.42□□□□□ -0.9
BEST3-205ENST00000488961 ALDH1L2Q3SY69 923 aa9.42□□□□□ -0.9
BEST3-205ENST00000488961 CABLES1Q8TDN4 633 aa9.42□□□□□ -0.9
BEST3-205ENST00000488961 MAP7D2Q96T17 732 aa9.42□□□□□ -0.9
BEST3-205ENST00000488961 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
BEST3-205ENST00000488961 PEAK1Q9H792 1746 aa9.41□□□□□ -0.9
BEST3-205ENST00000488961 ZSCAN20P17040 1043 aaPredicted RBP9.41□□□□□ -0.9
BEST3-205ENST00000488961 UTP14CQ5TAP6 766 aaKnown RBP9.41□□□□□ -0.9
BEST3-205ENST00000488961 CCDC9Q9Y3X0 531 aaKnown RBP9.41□□□□□ -0.9
BEST3-205ENST00000488961 IL16Q14005 1332 aa9.41□□□□□ -0.9
BEST3-205ENST00000488961 VIRMAQ69YN4 1812 aaKnown RBP9.41□□□□□ -0.9
BEST3-205ENST00000488961 PNMA6EA0A0J9YXQ4 647 aa9.41□□□□□ -0.9
BEST3-205ENST00000488961 NCLP19338 710 aaKnown RBP9.41□□□□□ -0.9
BEST3-205ENST00000488961 MRE11P49959 708 aa9.41□□□□□ -0.9
BEST3-205ENST00000488961 DDX54Q8TDD1 881 aaKnown RBP9.41□□□□□ -0.9
BEST3-205ENST00000488961 GRPEL1Q9HAV7 217 aa9.41□□□□□ -0.9
BEST3-205ENST00000488961 R3HCC1Q9Y3T6 440 aaKnown RBP9.41□□□□□ -0.9
BEST3-205ENST00000488961 CEP170BQ9Y4F5 1589 aaPredicted RBP9.41□□□□□ -0.9
BEST3-205ENST00000488961 USP6P35125 1406 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms