RNA–Protein interactions for RNA: ENST00000488931.1

CASQ2-202, Transcript of calsequestrin 2, humanhuman

TSL 3

Gene CASQ2, Length 220 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-202ENST00000488931 NMRK2Q9NPI5 230 aa15.22■□□□□ 0.03
CASQ2-202ENST00000488931 NLRP2Q9NX02 1062 aa15.22■□□□□ 0.03
CASQ2-202ENST00000488931 MON2Q7Z3U7 1717 aa15.22■□□□□ 0.03
CASQ2-202ENST00000488931 UBR3Q6ZT12 1888 aa15.22■□□□□ 0.03
CASQ2-202ENST00000488931 PKD1L3Q7Z443 1732 aa15.21■□□□□ 0.03
CASQ2-202ENST00000488931 IL2RBP14784 551 aa15.21■□□□□ 0.03
CASQ2-202ENST00000488931 SMIM5Q71RC9 77 aa15.21■□□□□ 0.03
CASQ2-202ENST00000488931 KLRG1Q96E93 195 aa15.21■□□□□ 0.03
CASQ2-202ENST00000488931 ERBB3P21860 1342 aa15.2■□□□□ 0.02
CASQ2-202ENST00000488931 SLC34A2O95436 690 aa15.2■□□□□ 0.02
CASQ2-202ENST00000488931 FAM208AQ9UK61 1670 aaKnown RBP15.19■□□□□ 0.02
CASQ2-202ENST00000488931 AMIGO3Q86WK7 504 aa15.19■□□□□ 0.02
CASQ2-202ENST00000488931 JMYQ8N9B5 988 aa15.19■□□□□ 0.02
CASQ2-202ENST00000488931 DDX54Q8TDD1 881 aaKnown RBP15.19■□□□□ 0.02
CASQ2-202ENST00000488931 CD2APQ9Y5K6 639 aa15.19■□□□□ 0.02
CASQ2-202ENST00000488931 TTC21BQ7Z4L5 1316 aa15.18■□□□□ 0.02
CASQ2-202ENST00000488931 TOMM70O94826 608 aa15.18■□□□□ 0.02
CASQ2-202ENST00000488931 PRIM1P49642 420 aaKnown RBP15.18■□□□□ 0.02
CASQ2-202ENST00000488931 NBPF1Q3BBV0 1214 aa15.18■□□□□ 0.02
CASQ2-202ENST00000488931 CCNL1Q9UK58 526 aaPredicted RBP15.18■□□□□ 0.02
CASQ2-202ENST00000488931 C4BP0C0L5 1744 aa15.17■□□□□ 0.02
CASQ2-202ENST00000488931 BRCA1P38398 1863 aaKnown RBP15.17■□□□□ 0.02
CASQ2-202ENST00000488931 KIF13BQ9NQT8 1826 aa15.17■□□□□ 0.02
CASQ2-202ENST00000488931 ANKRD36BQ8N2N9 1353 aa15.15■□□□□ 0.02
CASQ2-202ENST00000488931 KCNH5Q8NCM2 988 aa15.15■□□□□ 0.02
CASQ2-202ENST00000488931 ANKRD24Q8TF21 1146 aa15.14■□□□□ 0.01
CASQ2-202ENST00000488931 CENPJQ9HC77 1338 aaPredicted RBP15.14■□□□□ 0.01
CASQ2-202ENST00000488931 ITGB4P16144 1822 aa15.13■□□□□ 0.01
CASQ2-202ENST00000488931 KCPQ6ZWJ8 1503 aa15.12■□□□□ 0.01
CASQ2-202ENST00000488931 PXDNLA1KZ92 1463 aa15.12■□□□□ 0.01
CASQ2-202ENST00000488931 MEGF6O75095 1541 aa15.12■□□□□ 0.01
CASQ2-202ENST00000488931 HSPA1AP0DMV8 641 aaKnown RBP15.11■□□□□ 0.01
CASQ2-202ENST00000488931 HSPA1BP0DMV9 641 aaKnown RBP15.11■□□□□ 0.01
CASQ2-202ENST00000488931 TNRC6CQ9HCJ0 1690 aaKnown RBP15.11■□□□□ 0.01
CASQ2-202ENST00000488931 ARFGEF1Q9Y6D6 1849 aa15.09■□□□□ 0.01
CASQ2-202ENST00000488931 PHF14O94880 888 aa15.09■□□□□ 0.01
CASQ2-202ENST00000488931 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.09■□□□□ 0.01
CASQ2-202ENST00000488931 LTV1Q96GA3 475 aaPredicted RBP15.09■□□□□ 0.01
CASQ2-202ENST00000488931 SBF1O95248 1867 aa15.09■□□□□ 0.01
CASQ2-202ENST00000488931 NME9Q86XW9 330 aa15.08■□□□□ 0
CASQ2-202ENST00000488931 RBM46Q8TBY0 533 aaKnown RBP15.08■□□□□ 0
CASQ2-202ENST00000488931 USP47Q96K76 1375 aa15.08■□□□□ 0
CASQ2-202ENST00000488931 RAB3GAP2Q9H2M9 1393 aa15.08■□□□□ 0
CASQ2-202ENST00000488931 MAP2P11137 1827 aaKnown RBP15.08■□□□□ 0
CASQ2-202ENST00000488931 TTC21AQ8NDW8 1320 aa15.07■□□□□ 0
CASQ2-202ENST00000488931 KTN1Q86UP2 1357 aaKnown RBP15.07■□□□□ 0
CASQ2-202ENST00000488931 BCS1LQ9Y276 419 aa15.05■□□□□ -0
CASQ2-202ENST00000488931 CD163L1Q9NR16 1453 aa15.03■□□□□ -0
CASQ2-202ENST00000488931 PALLDQ8WX93 1383 aa15.03■□□□□ -0
CASQ2-202ENST00000488931 ARHGAP27Q6ZUM4 889 aa15.03■□□□□ -0
CASQ2-202ENST00000488931 C16orf71Q8IYS4 520 aaPredicted RBP15.03■□□□□ -0
CASQ2-202ENST00000488931 USP31Q70CQ4 1352 aa15.02■□□□□ -0
CASQ2-202ENST00000488931 A0A0G2JLW4 131 aa15.02■□□□□ -0
CASQ2-202ENST00000488931 CCDC88AQ3V6T2 1871 aa15.01□□□□□ -0.01
CASQ2-202ENST00000488931 SBNO2Q9Y2G9 1366 aa15.01□□□□□ -0.01
CASQ2-202ENST00000488931 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.01□□□□□ -0.01
CASQ2-202ENST00000488931 C9orf131Q5VYM1 1079 aa15.01□□□□□ -0.01
CASQ2-202ENST00000488931 FSTL1Q12841 308 aa15□□□□□ -0.01
CASQ2-202ENST00000488931 AK7Q96M32 723 aa15□□□□□ -0.01
CASQ2-202ENST00000488931 RRAGCQ9HB90 399 aa15□□□□□ -0.01
CASQ2-202ENST00000488931 C4AP0C0L4 1744 aa15□□□□□ -0.01
CASQ2-202ENST00000488931 TIAM2Q8IVF5 1701 aa15□□□□□ -0.01
CASQ2-202ENST00000488931 C10orf71Q711Q0 1435 aa15□□□□□ -0.01
CASQ2-202ENST00000488931 EVC2Q86UK5 1308 aa14.99□□□□□ -0.01
CASQ2-202ENST00000488931 FBLN1P23142 703 aa14.99□□□□□ -0.01
CASQ2-202ENST00000488931 USHBP1Q8N6Y0 703 aa14.99□□□□□ -0.01
CASQ2-202ENST00000488931 ZCRB1Q8TBF4 217 aaKnown RBP14.99□□□□□ -0.01
CASQ2-202ENST00000488931 STAC3Q96MF2 364 aa14.99□□□□□ -0.01
CASQ2-202ENST00000488931 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
CASQ2-202ENST00000488931 MMP10P09238 476 aa14.97□□□□□ -0.01
CASQ2-202ENST00000488931 FAM161AQ3B820 660 aa14.97□□□□□ -0.01
CASQ2-202ENST00000488931 LINC00116Q8NCU8 138 aa14.97□□□□□ -0.01
CASQ2-202ENST00000488931 FLAD1Q8NFF5 587 aa14.97□□□□□ -0.01
CASQ2-202ENST00000488931 FCHSD2O94868 740 aa14.96□□□□□ -0.01
CASQ2-202ENST00000488931 DPEP1P16444 411 aa14.96□□□□□ -0.01
CASQ2-202ENST00000488931 PLEKHG2Q9H7P9 1386 aa14.96□□□□□ -0.02
CASQ2-202ENST00000488931 MPRIPQ6WCQ1 1025 aa14.95□□□□□ -0.02
CASQ2-202ENST00000488931 IP6K1Q92551 441 aa14.95□□□□□ -0.02
CASQ2-202ENST00000488931 RNF181Q9P0P0 153 aa14.94□□□□□ -0.02
CASQ2-202ENST00000488931 SMC1BQ8NDV3 1235 aa14.93□□□□□ -0.02
CASQ2-202ENST00000488931 COL5A3P25940 1745 aaPredicted RBP14.92□□□□□ -0.02
CASQ2-202ENST00000488931 FOXN1O15353 648 aa14.92□□□□□ -0.02
CASQ2-202ENST00000488931 MAP3K19Q56UN5 1328 aa14.92□□□□□ -0.02
CASQ2-202ENST00000488931 KDM2BQ8NHM5 1336 aa14.92□□□□□ -0.02
CASQ2-202ENST00000488931 GNPATO15228 680 aa14.91□□□□□ -0.02
CASQ2-202ENST00000488931 KCNA3P22001 575 aa14.91□□□□□ -0.02
CASQ2-202ENST00000488931 SSFA2P28290 1259 aa14.91□□□□□ -0.02
CASQ2-202ENST00000488931 HOXC9P31274 260 aa14.91□□□□□ -0.02
CASQ2-202ENST00000488931 ITPK1Q13572 414 aa14.91□□□□□ -0.02
CASQ2-202ENST00000488931 NSD3Q9BZ95 1437 aa14.91□□□□□ -0.02
CASQ2-202ENST00000488931 RASSF7Q02833 373 aa14.9□□□□□ -0.02
CASQ2-202ENST00000488931 NBPF6Q5VWK0 638 aa14.9□□□□□ -0.02
CASQ2-202ENST00000488931 NBPF4Q96M43 638 aa14.9□□□□□ -0.02
CASQ2-202ENST00000488931 MYH14Q7Z406 1995 aaKnown RBP14.9□□□□□ -0.02
CASQ2-202ENST00000488931 TNRC18O15417 2968 aaPredicted RBP14.9□□□□□ -0.02
CASQ2-202ENST00000488931 VIRMAQ69YN4 1812 aaKnown RBP14.89□□□□□ -0.03
CASQ2-202ENST00000488931 A0A1W2PP64 1363 aa14.89□□□□□ -0.03
CASQ2-202ENST00000488931 MKRN1Q9UHC7 482 aaKnown RBP14.89□□□□□ -0.03
CASQ2-202ENST00000488931 EDC4Q6P2E9 1401 aaKnown RBP14.89□□□□□ -0.03
CASQ2-202ENST00000488931 CYP27B1O15528 508 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms