RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 LRRC37A3O60309 1634 aa14.2□□□□□ -0.14
COL21A1-211ENST00000488912 CALD1Q05682 793 aaKnown RBP14.2□□□□□ -0.14
COL21A1-211ENST00000488912 VIRMAQ69YN4 1812 aaKnown RBP14.2□□□□□ -0.14
COL21A1-211ENST00000488912 WDR17Q8IZU2 1322 aa14.2□□□□□ -0.14
COL21A1-211ENST00000488912 MAP3K5Q99683 1374 aa14.19□□□□□ -0.14
COL21A1-211ENST00000488912 LAS1LQ9Y4W2 734 aaKnown RBP14.19□□□□□ -0.14
COL21A1-211ENST00000488912 MEGF6O75095 1541 aa14.19□□□□□ -0.14
COL21A1-211ENST00000488912 IFT57Q9NWB7 429 aa14.19□□□□□ -0.14
COL21A1-211ENST00000488912 PLCH1Q4KWH8 1693 aa14.18□□□□□ -0.14
COL21A1-211ENST00000488912 GNAT3A8MTJ3 354 aa14.18□□□□□ -0.14
COL21A1-211ENST00000488912 RTF1Q92541 710 aaKnown RBP14.18□□□□□ -0.14
COL21A1-211ENST00000488912 ZNF853P0CG23 659 aa14.18□□□□□ -0.14
COL21A1-211ENST00000488912 RRP1P56182 461 aaKnown RBP14.18□□□□□ -0.14
COL21A1-211ENST00000488912 GNAI1P63096 354 aa14.18□□□□□ -0.14
COL21A1-211ENST00000488912 STRN4Q9NRL3 753 aa14.18□□□□□ -0.14
COL21A1-211ENST00000488912 CRB1P82279 1406 aa14.17□□□□□ -0.14
COL21A1-211ENST00000488912 PLEKHO1Q53GL0 409 aaPredicted RBP14.17□□□□□ -0.14
COL21A1-211ENST00000488912 TOM1L2Q6ZVM7 507 aa14.17□□□□□ -0.14
COL21A1-211ENST00000488912 RAPGEF4Q8WZA2 1011 aa14.17□□□□□ -0.14
COL21A1-211ENST00000488912 CFAP44Q96MT7 982 aa14.17□□□□□ -0.14
COL21A1-211ENST00000488912 PKD1L3Q7Z443 1732 aa14.17□□□□□ -0.14
COL21A1-211ENST00000488912 PARP4Q9UKK3 1724 aaKnown RBP14.17□□□□□ -0.14
COL21A1-211ENST00000488912 HTATSF1O43719 755 aaKnown RBP14.16□□□□□ -0.14
COL21A1-211ENST00000488912 EXOSC9Q06265 439 aaKnown RBP14.16□□□□□ -0.14
COL21A1-211ENST00000488912 AMOTQ4VCS5 1084 aa14.16□□□□□ -0.14
COL21A1-211ENST00000488912 MBIPQ9NS73 344 aa14.16□□□□□ -0.14
COL21A1-211ENST00000488912 BTG4Q9NY30 223 aa14.16□□□□□ -0.14
COL21A1-211ENST00000488912 ZNF530Q6P9A1 599 aaPredicted RBP14.16□□□□□ -0.14
COL21A1-211ENST00000488912 LARP1Q6PKG0 1096 aaKnown RBP14.16□□□□□ -0.14
COL21A1-211ENST00000488912 ADAMTS2O95450 1211 aa14.15□□□□□ -0.14
COL21A1-211ENST00000488912 NUTM2BA6NNL0 878 aaPredicted RBP14.15□□□□□ -0.14
COL21A1-211ENST00000488912 NUTM2EB1AL46 878 aaPredicted RBP14.15□□□□□ -0.14
COL21A1-211ENST00000488912 EVA1CP58658 441 aa14.15□□□□□ -0.14
COL21A1-211ENST00000488912 ERICH6Q7L0X2 663 aa14.15□□□□□ -0.14
COL21A1-211ENST00000488912 NUTM2AQ8IVF1 878 aaPredicted RBP14.15□□□□□ -0.14
COL21A1-211ENST00000488912 TATP17735 454 aaPredicted RBP14.14□□□□□ -0.15
COL21A1-211ENST00000488912 IL17REQ8NFR9 667 aa14.14□□□□□ -0.15
COL21A1-211ENST00000488912 NRAPQ86VF7 1730 aa14.14□□□□□ -0.15
COL21A1-211ENST00000488912 PLIN1O60240 522 aa14.14□□□□□ -0.15
COL21A1-211ENST00000488912 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
COL21A1-211ENST00000488912 CARD10Q9BWT7 1032 aa14.14□□□□□ -0.15
COL21A1-211ENST00000488912 JCADQ9P266 1359 aa14.14□□□□□ -0.15
COL21A1-211ENST00000488912 BCAR3O75815 825 aa14.13□□□□□ -0.15
COL21A1-211ENST00000488912 CEMIPQ8WUJ3 1361 aa14.13□□□□□ -0.15
COL21A1-211ENST00000488912 PLEKHG2Q9H7P9 1386 aa14.13□□□□□ -0.15
COL21A1-211ENST00000488912 OVOS2A0A0G2JMS6 1433 aa14.13□□□□□ -0.15
COL21A1-211ENST00000488912 CHL1O00533 1208 aa14.13□□□□□ -0.15
COL21A1-211ENST00000488912 C1orf141Q5JVX7 400 aa14.13□□□□□ -0.15
COL21A1-211ENST00000488912 ADAMTS7Q9UKP4 1686 aa14.12□□□□□ -0.15
COL21A1-211ENST00000488912 CT47B1P0C2W7 299 aaPredicted RBP14.12□□□□□ -0.15
COL21A1-211ENST00000488912 RARSP54136 660 aaKnown RBP14.12□□□□□ -0.15
COL21A1-211ENST00000488912 NWD2Q9ULI1 1742 aa14.12□□□□□ -0.15
COL21A1-211ENST00000488912 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.12□□□□□ -0.15
COL21A1-211ENST00000488912 SCN11AQ9UI33 1791 aa14.11□□□□□ -0.15
COL21A1-211ENST00000488912 SHANK3Q9BYB0 1731 aa14.11□□□□□ -0.15
COL21A1-211ENST00000488912 MPRIPQ6WCQ1 1025 aa14.11□□□□□ -0.15
COL21A1-211ENST00000488912 LGR6Q9HBX8 967 aa14.11□□□□□ -0.15
COL21A1-211ENST00000488912 MIS18AQ9NYP9 233 aa14.11□□□□□ -0.15
COL21A1-211ENST00000488912 SPG7Q9UQ90 795 aa14.11□□□□□ -0.15
COL21A1-211ENST00000488912 TSPYL6Q8N831 410 aa14.1□□□□□ -0.15
COL21A1-211ENST00000488912 BCL2L13Q9BXK5 485 aa14.1□□□□□ -0.15
COL21A1-211ENST00000488912 USP35Q9P2H5 1018 aa14.1□□□□□ -0.15
COL21A1-211ENST00000488912 SIPA1L3O60292 1781 aaPredicted RBP14.1□□□□□ -0.15
COL21A1-211ENST00000488912 WNK3Q9BYP7 1800 aa14.1□□□□□ -0.15
COL21A1-211ENST00000488912 HSPA1LP34931 641 aa14.09□□□□□ -0.15
COL21A1-211ENST00000488912 TSPYL4Q9UJ04 414 aa14.09□□□□□ -0.15
COL21A1-211ENST00000488912 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
COL21A1-211ENST00000488912 IL2RBP14784 551 aa14.09□□□□□ -0.15
COL21A1-211ENST00000488912 PHKG2P15735 406 aa14.09□□□□□ -0.15
COL21A1-211ENST00000488912 C8orf58Q8NAV2 365 aa14.09□□□□□ -0.15
COL21A1-211ENST00000488912 SLIT2O94813 1529 aa14.08□□□□□ -0.15
COL21A1-211ENST00000488912 ELL2O00472 640 aaPredicted RBP14.08□□□□□ -0.16
COL21A1-211ENST00000488912 CYP27B1O15528 508 aa14.08□□□□□ -0.16
COL21A1-211ENST00000488912 RNMTO43148 476 aaKnown RBP14.08□□□□□ -0.16
COL21A1-211ENST00000488912 KRT24Q2M2I5 525 aa14.08□□□□□ -0.16
COL21A1-211ENST00000488912 KDM6AO15550 1401 aaPredicted RBP14.08□□□□□ -0.16
COL21A1-211ENST00000488912 LRP6O75581 1613 aa14.08□□□□□ -0.16
COL21A1-211ENST00000488912 TAF7Q15545 349 aaPredicted RBP14.08□□□□□ -0.16
COL21A1-211ENST00000488912 TWISTNBQ3B726 338 aaPredicted RBP14.08□□□□□ -0.16
COL21A1-211ENST00000488912 C20orf194Q5TEA3 1177 aa14.08□□□□□ -0.16
COL21A1-211ENST00000488912 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.08□□□□□ -0.16
COL21A1-211ENST00000488912 VAMP4O75379 141 aa14.07□□□□□ -0.16
COL21A1-211ENST00000488912 IFNL2Q8IZJ0 200 aa14.07□□□□□ -0.16
COL21A1-211ENST00000488912 SSH1Q8WYL5 1049 aa14.07□□□□□ -0.16
COL21A1-211ENST00000488912 ERICH6BQ5W0A0 696 aa14.07□□□□□ -0.16
COL21A1-211ENST00000488912 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
COL21A1-211ENST00000488912 SPATA31A6Q5VVP1 1343 aa14.06□□□□□ -0.16
COL21A1-211ENST00000488912 TEFQ10587 303 aa14.06□□□□□ -0.16
COL21A1-211ENST00000488912 ZCRB1Q8TBF4 217 aaKnown RBP14.06□□□□□ -0.16
COL21A1-211ENST00000488912 PCDH11XQ9BZA7 1347 aa14.06□□□□□ -0.16
COL21A1-211ENST00000488912 PCDH11YQ9BZA8 1340 aa14.06□□□□□ -0.16
COL21A1-211ENST00000488912 DISP2A7MBM2 1401 aa14.06□□□□□ -0.16
COL21A1-211ENST00000488912 FRAT1Q92837 279 aaPredicted RBP14.06□□□□□ -0.16
COL21A1-211ENST00000488912 BABAM1Q9NWV8 329 aa14.06□□□□□ -0.16
COL21A1-211ENST00000488912 ZNF428Q96B54 188 aa14.05□□□□□ -0.16
COL21A1-211ENST00000488912 CANXP27824 592 aaKnown RBP14.04□□□□□ -0.16
COL21A1-211ENST00000488912 C8orf37Q96NL8 207 aa14.04□□□□□ -0.16
COL21A1-211ENST00000488912 MRC1P22897 1456 aa14.04□□□□□ -0.16
COL21A1-211ENST00000488912 ALDH1L2Q3SY69 923 aa14.04□□□□□ -0.16
COL21A1-211ENST00000488912 EXOC6Q8TAG9 804 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms