RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 RGPD2P0DJD1 1756 aa17.4■□□□□ 0.38
PHF1-210ENST00000488767 EN1Q05925 392 aaPredicted RBP17.39■□□□□ 0.37
PHF1-210ENST00000488767 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
PHF1-210ENST00000488767 IGSF1Q8N6C5 1336 aa17.38■□□□□ 0.37
PHF1-210ENST00000488767 TNS1Q9HBL0 1735 aaKnown RBP17.38■□□□□ 0.37
PHF1-210ENST00000488767 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
PHF1-210ENST00000488767 PLEKHG2Q9H7P9 1386 aa17.37■□□□□ 0.37
PHF1-210ENST00000488767 DIAPH1O60610 1272 aaKnown RBP17.36■□□□□ 0.37
PHF1-210ENST00000488767 ACSBG1Q96GR2 724 aa17.36■□□□□ 0.37
PHF1-210ENST00000488767 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.36■□□□□ 0.373e-6■■■■□ 20.3
PHF1-210ENST00000488767 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
PHF1-210ENST00000488767 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
PHF1-210ENST00000488767 PLSCR1O15162 318 aa17.34■□□□□ 0.37
PHF1-210ENST00000488767 IL13P35225 146 aa17.34■□□□□ 0.37
PHF1-210ENST00000488767 EZH2Q15910 746 aaKnown RBP17.34■□□□□ 0.37
PHF1-210ENST00000488767 PLEKHO1Q53GL0 409 aaPredicted RBP17.33■□□□□ 0.36
PHF1-210ENST00000488767 SULT6B1Q6IMI4 303 aa17.33■□□□□ 0.36
PHF1-210ENST00000488767 CAMKK2Q96RR4 588 aa17.33■□□□□ 0.36
PHF1-210ENST00000488767 AMOTQ4VCS5 1084 aa17.32■□□□□ 0.36
PHF1-210ENST00000488767 NBPF14Q5TI25 921 aa17.32■□□□□ 0.36
PHF1-210ENST00000488767 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
PHF1-210ENST00000488767 SBF2Q86WG5 1849 aa17.32■□□□□ 0.36
PHF1-210ENST00000488767 NHSQ6T4R5 1651 aa17.32■□□□□ 0.36
PHF1-210ENST00000488767 KCNQ2O43526 872 aa17.31■□□□□ 0.36
PHF1-210ENST00000488767 PPP2R1AP30153 589 aa17.31■□□□□ 0.36
PHF1-210ENST00000488767 IFNL2Q8IZJ0 200 aa17.31■□□□□ 0.36
PHF1-210ENST00000488767 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
PHF1-210ENST00000488767 HSP90AB1P08238 724 aaKnown RBP17.3■□□□□ 0.36
PHF1-210ENST00000488767 PRIM1P49642 420 aaKnown RBP17.3■□□□□ 0.36
PHF1-210ENST00000488767 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
PHF1-210ENST00000488767 CYP27B1O15528 508 aa17.29■□□□□ 0.36
PHF1-210ENST00000488767 RALBP1Q15311 655 aa17.29■□□□□ 0.36
PHF1-210ENST00000488767 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
PHF1-210ENST00000488767 RGPD3A6NKT7 1758 aaPredicted RBP17.29■□□□□ 0.36
PHF1-210ENST00000488767 RGPD4Q7Z3J3 1758 aa17.29■□□□□ 0.36
PHF1-210ENST00000488767 KDRP35968 1356 aa17.28■□□□□ 0.36
PHF1-210ENST00000488767 SHANK3Q9BYB0 1731 aa17.28■□□□□ 0.36
PHF1-210ENST00000488767 AEBP1Q8IUX7 1158 aa17.28■□□□□ 0.36
PHF1-210ENST00000488767 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
PHF1-210ENST00000488767 PTF1AQ7RTS3 328 aa17.27■□□□□ 0.36
PHF1-210ENST00000488767 DOT1LQ8TEK3 1739 aa17.27■□□□□ 0.35
PHF1-210ENST00000488767 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
PHF1-210ENST00000488767 HMOX1P09601 288 aa17.26■□□□□ 0.35
PHF1-210ENST00000488767 PHKG2P15735 406 aa17.26■□□□□ 0.35
PHF1-210ENST00000488767 NKX1-1Q15270 411 aaPredicted RBP17.26■□□□□ 0.35
PHF1-210ENST00000488767 HMGB2P26583 209 aaKnown RBP17.25■□□□□ 0.35
PHF1-210ENST00000488767 KAT6BQ8WYB5 2073 aa17.25■□□□□ 0.35
PHF1-210ENST00000488767 TXNRD1Q16881 649 aa17.24■□□□□ 0.35
PHF1-210ENST00000488767 MPRIPQ6WCQ1 1025 aa17.24■□□□□ 0.35
PHF1-210ENST00000488767 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
PHF1-210ENST00000488767 COL3A1P02461 1466 aaPredicted RBP17.24■□□□□ 0.35
PHF1-210ENST00000488767 RREB1Q92766 1687 aa17.23■□□□□ 0.35
PHF1-210ENST00000488767 SLC27A3Q5K4L6 730 aa17.23■□□□□ 0.35
PHF1-210ENST00000488767 TMOD3Q9NYL9 352 aa17.23■□□□□ 0.35
PHF1-210ENST00000488767 BTAF1O14981 1849 aa17.23■□□□□ 0.35
PHF1-210ENST00000488767 NEFMP07197 916 aa17.22■□□□□ 0.35
PHF1-210ENST00000488767 U2AF1L5P0DN76 240 aaPredicted RBP17.22■□□□□ 0.35
PHF1-210ENST00000488767 U2AF1Q01081 240 aaKnown RBP eCLIP17.22■□□□□ 0.35
PHF1-210ENST00000488767 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
PHF1-210ENST00000488767 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
PHF1-210ENST00000488767 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
PHF1-210ENST00000488767 AKAP4Q5JQC9 854 aa17.21■□□□□ 0.35
PHF1-210ENST00000488767 STK32BQ9NY57 414 aa17.21■□□□□ 0.35
PHF1-210ENST00000488767 NUP188Q5SRE5 1749 aa17.21■□□□□ 0.35
PHF1-210ENST00000488767 MYBBP1AQ9BQG0 1328 aaKnown RBP17.21■□□□□ 0.34
PHF1-210ENST00000488767 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
PHF1-210ENST00000488767 GAS2L2Q8NHY3 880 aa17.19■□□□□ 0.34
PHF1-210ENST00000488767 CABP4P57796 275 aa17.18■□□□□ 0.34
PHF1-210ENST00000488767 PROM2Q8N271 834 aa17.18■□□□□ 0.34
PHF1-210ENST00000488767 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
PHF1-210ENST00000488767 CCNL1Q9UK58 526 aaPredicted RBP17.18■□□□□ 0.34
PHF1-210ENST00000488767 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
PHF1-210ENST00000488767 FCHSD2O94868 740 aa17.17■□□□□ 0.34
PHF1-210ENST00000488767 PIGBQ92521 554 aa17.17■□□□□ 0.34
PHF1-210ENST00000488767 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
PHF1-210ENST00000488767 MTHFSDQ2M296 383 aaKnown RBP17.15■□□□□ 0.34
PHF1-210ENST00000488767 TOGARAM1Q9Y4F4 1720 aa17.15■□□□□ 0.34
PHF1-210ENST00000488767 SLC15A2Q16348 729 aa17.14■□□□□ 0.33
PHF1-210ENST00000488767 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
PHF1-210ENST00000488767 PRKRIP1Q9H875 184 aaPredicted RBP17.13■□□□□ 0.33
PHF1-210ENST00000488767 ANO8Q9HCE9 1232 aaPredicted RBP17.13■□□□□ 0.33
PHF1-210ENST00000488767 MAP3K5Q99683 1374 aa17.13■□□□□ 0.33
PHF1-210ENST00000488767 KDM6AO15550 1401 aaPredicted RBP17.13■□□□□ 0.33
PHF1-210ENST00000488767 ITGB4P16144 1822 aa17.12■□□□□ 0.33
PHF1-210ENST00000488767 GNAT3A8MTJ3 354 aa17.12■□□□□ 0.33
PHF1-210ENST00000488767 LRRC4BQ9NT99 713 aa17.12■□□□□ 0.33
PHF1-210ENST00000488767 MAPK8IP3Q9UPT6 1336 aa17.12■□□□□ 0.33
PHF1-210ENST00000488767 WDR43Q15061 677 aaKnown RBP eCLIP17.11■□□□□ 0.33
PHF1-210ENST00000488767 RTF1Q92541 710 aaKnown RBP17.11■□□□□ 0.33
PHF1-210ENST00000488767 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
PHF1-210ENST00000488767 LY75O60449 1722 aa17.1■□□□□ 0.33
PHF1-210ENST00000488767 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
PHF1-210ENST00000488767 RNMTO43148 476 aaKnown RBP17.1■□□□□ 0.33
PHF1-210ENST00000488767 SIK1P57059 783 aa17.1■□□□□ 0.33
PHF1-210ENST00000488767 TEFQ10587 303 aa17.1■□□□□ 0.33
PHF1-210ENST00000488767 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
PHF1-210ENST00000488767 SLC52A2Q9HAB3 445 aa17.1■□□□□ 0.33
PHF1-210ENST00000488767 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
PHF1-210ENST00000488767 ANP32CO43423 234 aa17.09■□□□□ 0.33
PHF1-210ENST00000488767 KCNQ4P56696 695 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms