RNA–Protein interactions for RNA: ENST00000488685.1

SH2D3C-212, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best)

Gene SH2D3C, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-212ENST00000488685 KCNQ2O43526 872 aa18.77■□□□□ 0.6
SH2D3C-212ENST00000488685 EIF4A2Q14240 407 aaKnown RBP18.77■□□□□ 0.6
SH2D3C-212ENST00000488685 NPC1L1Q9UHC9 1359 aa18.76■□□□□ 0.59
SH2D3C-212ENST00000488685 RREB1Q92766 1687 aa18.76■□□□□ 0.59
SH2D3C-212ENST00000488685 RGPD3A6NKT7 1758 aaPredicted RBP18.76■□□□□ 0.59
SH2D3C-212ENST00000488685 RGPD4Q7Z3J3 1758 aa18.76■□□□□ 0.59
SH2D3C-212ENST00000488685 SHANK3Q9BYB0 1731 aa18.75■□□□□ 0.59
SH2D3C-212ENST00000488685 ACSBG1Q96GR2 724 aa18.75■□□□□ 0.59
SH2D3C-212ENST00000488685 NHSQ6T4R5 1651 aa18.75■□□□□ 0.59
SH2D3C-212ENST00000488685 CC2D1BQ5T0F9 858 aaKnown RBP18.74■□□□□ 0.59
SH2D3C-212ENST00000488685 PROM2Q8N271 834 aa18.73■□□□□ 0.59
SH2D3C-212ENST00000488685 NUP188Q5SRE5 1749 aa18.71■□□□□ 0.59
SH2D3C-212ENST00000488685 NBPF14Q5TI25 921 aa18.71■□□□□ 0.59
SH2D3C-212ENST00000488685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.71■□□□□ 0.59
SH2D3C-212ENST00000488685 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
SH2D3C-212ENST00000488685 PCDH11XQ9BZA7 1347 aa18.71■□□□□ 0.59
SH2D3C-212ENST00000488685 PCDH11YQ9BZA8 1340 aa18.71■□□□□ 0.59
SH2D3C-212ENST00000488685 PSDA5PKW4 1024 aaPredicted RBP18.7■□□□□ 0.58
SH2D3C-212ENST00000488685 MTHFSP49914 203 aa18.7■□□□□ 0.58
SH2D3C-212ENST00000488685 TXNRD1Q16881 649 aa18.7■□□□□ 0.58
SH2D3C-212ENST00000488685 CYP27B1O15528 508 aa18.69■□□□□ 0.58
SH2D3C-212ENST00000488685 PRIM1P49642 420 aaKnown RBP18.69■□□□□ 0.58
SH2D3C-212ENST00000488685 R3HDM1Q15032 1099 aaKnown RBP18.69■□□□□ 0.58
SH2D3C-212ENST00000488685 SPG7Q9UQ90 795 aa18.69■□□□□ 0.58
SH2D3C-212ENST00000488685 PKD1L3Q7Z443 1732 aa18.69■□□□□ 0.58
SH2D3C-212ENST00000488685 PLEKHG2Q9H7P9 1386 aa18.68■□□□□ 0.58
SH2D3C-212ENST00000488685 BTAF1O14981 1849 aa18.68■□□□□ 0.58
SH2D3C-212ENST00000488685 IL13P35225 146 aa18.68■□□□□ 0.58
SH2D3C-212ENST00000488685 KAT6BQ8WYB5 2073 aa18.67■□□□□ 0.58
SH2D3C-212ENST00000488685 NKX1-1Q15270 411 aaPredicted RBP18.67■□□□□ 0.58
SH2D3C-212ENST00000488685 SYTL4Q96C24 671 aaPredicted RBP18.66■□□□□ 0.58
SH2D3C-212ENST00000488685 DOT1LQ8TEK3 1739 aa18.66■□□□□ 0.58
SH2D3C-212ENST00000488685 CNGB1Q14028 1251 aaPredicted RBP18.63■□□□□ 0.57
SH2D3C-212ENST00000488685 IFNL2Q8IZJ0 200 aa18.63■□□□□ 0.57
SH2D3C-212ENST00000488685 PHKG2P15735 406 aa18.62■□□□□ 0.57
SH2D3C-212ENST00000488685 SULT6B1Q6IMI4 303 aa18.62■□□□□ 0.57
SH2D3C-212ENST00000488685 KDRP35968 1356 aa18.62■□□□□ 0.57
SH2D3C-212ENST00000488685 DIAPH1O60610 1272 aaKnown RBP18.61■□□□□ 0.57
SH2D3C-212ENST00000488685 AMOTQ4VCS5 1084 aa18.61■□□□□ 0.57
SH2D3C-212ENST00000488685 PLEKHO1Q53GL0 409 aaPredicted RBP18.61■□□□□ 0.57
SH2D3C-212ENST00000488685 AEBP1Q8IUX7 1158 aa18.61■□□□□ 0.57
SH2D3C-212ENST00000488685 SLC27A3Q5K4L6 730 aa18.6■□□□□ 0.57
SH2D3C-212ENST00000488685 ANO8Q9HCE9 1232 aaPredicted RBP18.6■□□□□ 0.57
SH2D3C-212ENST00000488685 MPRIPQ6WCQ1 1025 aa18.59■□□□□ 0.57
SH2D3C-212ENST00000488685 LRRC4BQ9NT99 713 aa18.59■□□□□ 0.57
SH2D3C-212ENST00000488685 STK32BQ9NY57 414 aa18.59■□□□□ 0.57
SH2D3C-212ENST00000488685 TOGARAM1Q9Y4F4 1720 aa18.58■□□□□ 0.57
SH2D3C-212ENST00000488685 ZEB1P37275 1124 aaPredicted RBP18.58■□□□□ 0.56
SH2D3C-212ENST00000488685 SLC15A2Q16348 729 aa18.58■□□□□ 0.56
SH2D3C-212ENST00000488685 LY75O60449 1722 aa18.57■□□□□ 0.56
SH2D3C-212ENST00000488685 LRP5O75197 1615 aa18.57■□□□□ 0.56
SH2D3C-212ENST00000488685 ITGB4P16144 1822 aa18.57■□□□□ 0.56
SH2D3C-212ENST00000488685 HSP90AB1P08238 724 aaKnown RBP18.56■□□□□ 0.56
SH2D3C-212ENST00000488685 PPP2R1AP30153 589 aa18.56■□□□□ 0.56
SH2D3C-212ENST00000488685 PIGBQ92521 554 aa18.56■□□□□ 0.56
SH2D3C-212ENST00000488685 COL3A1P02461 1466 aaPredicted RBP18.56■□□□□ 0.56
SH2D3C-212ENST00000488685 PAPPAQ13219 1627 aa18.56■□□□□ 0.56
SH2D3C-212ENST00000488685 DCAF5Q96JK2 942 aa18.55■□□□□ 0.56
SH2D3C-212ENST00000488685 HMOX1P09601 288 aa18.54■□□□□ 0.56
SH2D3C-212ENST00000488685 ZNF530Q6P9A1 599 aaPredicted RBP18.54■□□□□ 0.56
SH2D3C-212ENST00000488685 SMARCC1Q92922 1105 aaPredicted RBP18.54■□□□□ 0.56
SH2D3C-212ENST00000488685 CFAP53Q96M91 514 aa18.54■□□□□ 0.56
SH2D3C-212ENST00000488685 ERVV-2B6SEH9 535 aa18.53■□□□□ 0.56
SH2D3C-212ENST00000488685 AKT1S1Q96B36 256 aa18.53■□□□□ 0.56
SH2D3C-212ENST00000488685 TMOD3Q9NYL9 352 aa18.53■□□□□ 0.56
SH2D3C-212ENST00000488685 CCNL1Q9UK58 526 aaPredicted RBP18.53■□□□□ 0.56
SH2D3C-212ENST00000488685 HMGB2P26583 209 aaKnown RBP18.52■□□□□ 0.56
SH2D3C-212ENST00000488685 KCNQ4P56696 695 aa18.52■□□□□ 0.56
SH2D3C-212ENST00000488685 C1orf141Q5JVX7 400 aa18.52■□□□□ 0.56
SH2D3C-212ENST00000488685 PALLDQ8WX93 1383 aa18.52■□□□□ 0.55
SH2D3C-212ENST00000488685 CASZ1Q86V15 1759 aa18.51■□□□□ 0.55
SH2D3C-212ENST00000488685 ZNF827Q17R98 1081 aa18.51■□□□□ 0.55
SH2D3C-212ENST00000488685 PDGFDQ9GZP0 370 aaPredicted RBP18.51■□□□□ 0.55
SH2D3C-212ENST00000488685 U2SURPO15042 1029 aaKnown RBP18.5■□□□□ 0.55
SH2D3C-212ENST00000488685 DDX10Q13206 875 aaKnown RBP18.5■□□□□ 0.55
SH2D3C-212ENST00000488685 SPON1Q9HCB6 807 aa18.5■□□□□ 0.55
SH2D3C-212ENST00000488685 KDM6AO15550 1401 aaPredicted RBP18.49■□□□□ 0.55
SH2D3C-212ENST00000488685 AKAP4Q5JQC9 854 aa18.49■□□□□ 0.55
SH2D3C-212ENST00000488685 MTHFSDQ2M296 383 aaKnown RBP18.48■□□□□ 0.55
SH2D3C-212ENST00000488685 ATG3Q9NT62 314 aa18.48■□□□□ 0.55
SH2D3C-212ENST00000488685 ASAP1Q9ULH1 1129 aa18.48■□□□□ 0.55
SH2D3C-212ENST00000488685 NUDCQ9Y266 331 aa18.48■□□□□ 0.55
SH2D3C-212ENST00000488685 CABP4P57796 275 aa18.47■□□□□ 0.55
SH2D3C-212ENST00000488685 TFCP2L1Q9NZI6 479 aa18.46■□□□□ 0.55
SH2D3C-212ENST00000488685 QSER1Q2KHR3 1735 aa18.46■□□□□ 0.55
SH2D3C-212ENST00000488685 LOC102724428A0A0B4J2F2 783 aa18.45■□□□□ 0.54
SH2D3C-212ENST00000488685 ZBTB7AO95365 584 aa18.45■□□□□ 0.54
SH2D3C-212ENST00000488685 SIK1P57059 783 aa18.45■□□□□ 0.54
SH2D3C-212ENST00000488685 RALBP1Q15311 655 aa18.45■□□□□ 0.54
SH2D3C-212ENST00000488685 NFATC2IPQ8NCF5 419 aa18.45■□□□□ 0.54
SH2D3C-212ENST00000488685 TAF1LQ8IZX4 1826 aa18.44■□□□□ 0.54
SH2D3C-212ENST00000488685 MTFR1LQ9H019 292 aa18.44■□□□□ 0.54
SH2D3C-212ENST00000488685 SCN11AQ9UI33 1791 aa18.44■□□□□ 0.54
SH2D3C-212ENST00000488685 PNPLA7Q6ZV29 1317 aa18.44■□□□□ 0.54
SH2D3C-212ENST00000488685 C5P01031 1676 aa18.44■□□□□ 0.54
SH2D3C-212ENST00000488685 SLC16A10Q8TF71 515 aa18.43■□□□□ 0.54
SH2D3C-212ENST00000488685 RSPH6AQ9H0K4 717 aa18.43■□□□□ 0.54
SH2D3C-212ENST00000488685 LGR6Q9HBX8 967 aa18.43■□□□□ 0.54
SH2D3C-212ENST00000488685 FCHSD2O94868 740 aa18.42■□□□□ 0.54
SH2D3C-212ENST00000488685 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms