RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 AMIGO3Q86WK7 504 aa13.71□□□□□ -0.21
SUPT20H-218ENST00000488590 CABP1Q9NZU7 370 aa13.71□□□□□ -0.21
SUPT20H-218ENST00000488590 SOX12O15370 315 aa13.7□□□□□ -0.22
SUPT20H-218ENST00000488590 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
SUPT20H-218ENST00000488590 KDM2AQ9Y2K7 1162 aa13.7□□□□□ -0.22
SUPT20H-218ENST00000488590 USP54Q70EL1 1684 aa13.69□□□□□ -0.22
SUPT20H-218ENST00000488590 NLRP2Q9NX02 1062 aa13.69□□□□□ -0.22
SUPT20H-218ENST00000488590 C10orf71Q711Q0 1435 aa13.69□□□□□ -0.22
SUPT20H-218ENST00000488590 KIAA1551Q9HCM1 1747 aa13.69□□□□□ -0.22
SUPT20H-218ENST00000488590 DCAF11Q8TEB1 546 aa13.68□□□□□ -0.22
SUPT20H-218ENST00000488590 TTC21BQ7Z4L5 1316 aa13.67□□□□□ -0.22
SUPT20H-218ENST00000488590 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
SUPT20H-218ENST00000488590 DDX54Q8TDD1 881 aaKnown RBP13.67□□□□□ -0.22
SUPT20H-218ENST00000488590 SYTL4Q96C24 671 aaPredicted RBP13.67□□□□□ -0.22
SUPT20H-218ENST00000488590 DOT1LQ8TEK3 1739 aa13.67□□□□□ -0.22
SUPT20H-218ENST00000488590 TOGARAM1Q9Y4F4 1720 aa13.67□□□□□ -0.22
SUPT20H-218ENST00000488590 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
SUPT20H-218ENST00000488590 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
SUPT20H-218ENST00000488590 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
SUPT20H-218ENST00000488590 C16orf71Q8IYS4 520 aaPredicted RBP13.66□□□□□ -0.22
SUPT20H-218ENST00000488590 FLAD1Q8NFF5 587 aa13.66□□□□□ -0.22
SUPT20H-218ENST00000488590 KCPQ6ZWJ8 1503 aa13.65□□□□□ -0.22
SUPT20H-218ENST00000488590 C5P01031 1676 aa13.65□□□□□ -0.22
SUPT20H-218ENST00000488590 C9orf131Q5VYM1 1079 aa13.63□□□□□ -0.23
SUPT20H-218ENST00000488590 SMC1BQ8NDV3 1235 aa13.63□□□□□ -0.23
SUPT20H-218ENST00000488590 ANKRD24Q8TF21 1146 aa13.63□□□□□ -0.23
SUPT20H-218ENST00000488590 STAC3Q96MF2 364 aa13.63□□□□□ -0.23
SUPT20H-218ENST00000488590 RRAGCQ9HB90 399 aa13.63□□□□□ -0.23
SUPT20H-218ENST00000488590 KIF13BQ9NQT8 1826 aa13.62□□□□□ -0.23
SUPT20H-218ENST00000488590 ARHGAP27Q6ZUM4 889 aa13.62□□□□□ -0.23
SUPT20H-218ENST00000488590 BCS1LQ9Y276 419 aa13.62□□□□□ -0.23
SUPT20H-218ENST00000488590 TAF1LQ8IZX4 1826 aa13.62□□□□□ -0.23
SUPT20H-218ENST00000488590 USP47Q96K76 1375 aa13.61□□□□□ -0.23
SUPT20H-218ENST00000488590 PLEKHG2Q9H7P9 1386 aa13.61□□□□□ -0.23
SUPT20H-218ENST00000488590 FOXN1O15353 648 aa13.6□□□□□ -0.23
SUPT20H-218ENST00000488590 PRDM10Q9NQV6 1147 aa13.6□□□□□ -0.23
SUPT20H-218ENST00000488590 N4BP2Q86UW6 1770 aaPredicted RBP13.6□□□□□ -0.23
SUPT20H-218ENST00000488590 TTC21AQ8NDW8 1320 aa13.6□□□□□ -0.23
SUPT20H-218ENST00000488590 KDM2BQ8NHM5 1336 aa13.6□□□□□ -0.23
SUPT20H-218ENST00000488590 PKD1L3Q7Z443 1732 aa13.59□□□□□ -0.23
SUPT20H-218ENST00000488590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-218ENST00000488590 A0A0G2JLW4 131 aa13.59□□□□□ -0.23
SUPT20H-218ENST00000488590 UBR3Q6ZT12 1888 aa13.59□□□□□ -0.23
SUPT20H-218ENST00000488590 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
SUPT20H-218ENST00000488590 USP31Q70CQ4 1352 aa13.58□□□□□ -0.23
SUPT20H-218ENST00000488590 TGFB2P61812 414 aa13.58□□□□□ -0.24
SUPT20H-218ENST00000488590 TNRC6CQ9HCJ0 1690 aaKnown RBP13.58□□□□□ -0.24
SUPT20H-218ENST00000488590 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
SUPT20H-218ENST00000488590 KCNA3P22001 575 aa13.57□□□□□ -0.24
SUPT20H-218ENST00000488590 NBPF1Q3BBV0 1214 aa13.57□□□□□ -0.24
SUPT20H-218ENST00000488590 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
SUPT20H-218ENST00000488590 CENPJQ9HC77 1338 aaPredicted RBP13.57□□□□□ -0.24
SUPT20H-218ENST00000488590 PHF14O94880 888 aa13.56□□□□□ -0.24
SUPT20H-218ENST00000488590 RGS19P49795 217 aa13.56□□□□□ -0.24
SUPT20H-218ENST00000488590 LTN1O94822 1766 aa13.55□□□□□ -0.24
SUPT20H-218ENST00000488590 DPEP1P16444 411 aa13.55□□□□□ -0.24
SUPT20H-218ENST00000488590 ABHD8Q96I13 439 aa13.55□□□□□ -0.24
SUPT20H-218ENST00000488590 FAM208AQ9UK61 1670 aaKnown RBP13.55□□□□□ -0.24
SUPT20H-218ENST00000488590 KIAA1210Q9ULL0 1709 aa13.55□□□□□ -0.24
SUPT20H-218ENST00000488590 PALLDQ8WX93 1383 aa13.55□□□□□ -0.24
SUPT20H-218ENST00000488590 MEGF6O75095 1541 aa13.54□□□□□ -0.24
SUPT20H-218ENST00000488590 FCHSD2O94868 740 aa13.54□□□□□ -0.24
SUPT20H-218ENST00000488590 MMP10P09238 476 aa13.54□□□□□ -0.24
SUPT20H-218ENST00000488590 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
SUPT20H-218ENST00000488590 SSFA2P28290 1259 aa13.53□□□□□ -0.24
SUPT20H-218ENST00000488590 AK7Q96M32 723 aa13.53□□□□□ -0.24
SUPT20H-218ENST00000488590 RNF181Q9P0P0 153 aa13.53□□□□□ -0.24
SUPT20H-218ENST00000488590 ARFGEF1Q9Y6D6 1849 aa13.53□□□□□ -0.24
SUPT20H-218ENST00000488590 MLLT1Q03111 559 aaPredicted RBP13.52□□□□□ -0.25
SUPT20H-218ENST00000488590 DCAF5Q96JK2 942 aa13.52□□□□□ -0.25
SUPT20H-218ENST00000488590 NSD3Q9BZ95 1437 aa13.52□□□□□ -0.25
SUPT20H-218ENST00000488590 TNRC18O15417 2968 aaPredicted RBP13.51□□□□□ -0.25
SUPT20H-218ENST00000488590 MKRN1Q9UHC7 482 aaKnown RBP13.51□□□□□ -0.25
SUPT20H-218ENST00000488590 KTN1Q86UP2 1357 aaKnown RBP13.5□□□□□ -0.25
SUPT20H-218ENST00000488590 HMGB2P26583 209 aaKnown RBP13.5□□□□□ -0.25
SUPT20H-218ENST00000488590 NME9Q86XW9 330 aa13.5□□□□□ -0.25
SUPT20H-218ENST00000488590 LINC00116Q8NCU8 138 aa13.5□□□□□ -0.25
SUPT20H-218ENST00000488590 IP6K1Q92551 441 aa13.5□□□□□ -0.25
SUPT20H-218ENST00000488590 SBF1O95248 1867 aa13.5□□□□□ -0.25
SUPT20H-218ENST00000488590 MAP2P11137 1827 aaKnown RBP13.5□□□□□ -0.25
SUPT20H-218ENST00000488590 KDM6AO15550 1401 aaPredicted RBP13.49□□□□□ -0.25
SUPT20H-218ENST00000488590 POTECB2RU33 542 aa13.49□□□□□ -0.25
SUPT20H-218ENST00000488590 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
SUPT20H-218ENST00000488590 CTCFP49711 727 aaPredicted RBP13.49□□□□□ -0.25
SUPT20H-218ENST00000488590 MON2Q7Z3U7 1717 aa13.49□□□□□ -0.25
SUPT20H-218ENST00000488590 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
SUPT20H-218ENST00000488590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.48□□□□□ -0.25
SUPT20H-218ENST00000488590 LTV1Q96GA3 475 aaPredicted RBP13.48□□□□□ -0.25
SUPT20H-218ENST00000488590 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
SUPT20H-218ENST00000488590 LBX1P52954 281 aa13.47□□□□□ -0.25
SUPT20H-218ENST00000488590 CD163L1Q9NR16 1453 aa13.47□□□□□ -0.25
SUPT20H-218ENST00000488590 CNTNAP1P78357 1384 aa13.46□□□□□ -0.25
SUPT20H-218ENST00000488590 EVC2Q86UK5 1308 aa13.46□□□□□ -0.25
SUPT20H-218ENST00000488590 ZC3H4Q9UPT8 1303 aaKnown RBP13.46□□□□□ -0.25
SUPT20H-218ENST00000488590 GLTPD2A6NH11 291 aa13.46□□□□□ -0.25
SUPT20H-218ENST00000488590 MPRIPQ6WCQ1 1025 aa13.46□□□□□ -0.25
SUPT20H-218ENST00000488590 WBP1LQ9NX94 342 aa13.46□□□□□ -0.25
SUPT20H-218ENST00000488590 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
SUPT20H-218ENST00000488590 ITPK1Q13572 414 aa13.45□□□□□ -0.26
SUPT20H-218ENST00000488590 PIM2Q9P1W9 311 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms