RNA–Protein interactions for RNA: ENST00000488410.5

TM2D1-209, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-209ENST00000488410 RRS1Q15050 365 aaKnown RBP13.63□□□□□ -0.23
TM2D1-209ENST00000488410 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
TM2D1-209ENST00000488410 ARXQ96QS3 562 aa13.63□□□□□ -0.23
TM2D1-209ENST00000488410 FHDC1Q9C0D6 1143 aaPredicted RBP13.63□□□□□ -0.23
TM2D1-209ENST00000488410 TFCP2L1Q9NZI6 479 aa13.63□□□□□ -0.23
TM2D1-209ENST00000488410 FAM208AQ9UK61 1670 aaKnown RBP13.63□□□□□ -0.23
TM2D1-209ENST00000488410 ANKRD36BQ8N2N9 1353 aa13.62□□□□□ -0.23
TM2D1-209ENST00000488410 FYB1O15117 783 aa13.62□□□□□ -0.23
TM2D1-209ENST00000488410 PTGER2P43116 358 aa13.62□□□□□ -0.23
TM2D1-209ENST00000488410 SLC27A3Q5K4L6 730 aa13.62□□□□□ -0.23
TM2D1-209ENST00000488410 SYT17Q9BSW7 474 aa13.62□□□□□ -0.23
TM2D1-209ENST00000488410 POLR3GLQ9BT43 218 aa13.62□□□□□ -0.23
TM2D1-209ENST00000488410 PCGF6Q9BYE7 350 aa13.62□□□□□ -0.23
TM2D1-209ENST00000488410 USP47Q96K76 1375 aa13.61□□□□□ -0.23
TM2D1-209ENST00000488410 PPM1GO15355 546 aaPredicted RBP13.61□□□□□ -0.23
TM2D1-209ENST00000488410 TATP17735 454 aaPredicted RBP13.61□□□□□ -0.23
TM2D1-209ENST00000488410 POLD1P28340 1107 aa13.61□□□□□ -0.23
TM2D1-209ENST00000488410 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
TM2D1-209ENST00000488410 SMG6Q86US8 1419 aaKnown RBP13.61□□□□□ -0.23
TM2D1-209ENST00000488410 KCNQ4P56696 695 aa13.6□□□□□ -0.23
TM2D1-209ENST00000488410 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
TM2D1-209ENST00000488410 NBPF4Q96M43 638 aa13.6□□□□□ -0.23
TM2D1-209ENST00000488410 LRRC4BQ9NT99 713 aa13.6□□□□□ -0.23
TM2D1-209ENST00000488410 MYOM1P52179 1685 aa13.59□□□□□ -0.23
TM2D1-209ENST00000488410 ZNF827Q17R98 1081 aa13.59□□□□□ -0.23
TM2D1-209ENST00000488410 MYCNP04198 464 aaPredicted RBP13.58□□□□□ -0.24
TM2D1-209ENST00000488410 GPR162Q16538 588 aa13.58□□□□□ -0.24
TM2D1-209ENST00000488410 HSP90AB2PQ58FF8 381 aa13.58□□□□□ -0.24
TM2D1-209ENST00000488410 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
TM2D1-209ENST00000488410 SLC16A10Q8TF71 515 aa13.58□□□□□ -0.24
TM2D1-209ENST00000488410 CCNL1Q9UK58 526 aaPredicted RBP13.58□□□□□ -0.24
TM2D1-209ENST00000488410 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
TM2D1-209ENST00000488410 KIF20BQ96Q89 1820 aa13.56□□□□□ -0.24
TM2D1-209ENST00000488410 HMGB2P26583 209 aaKnown RBP13.56□□□□□ -0.24
TM2D1-209ENST00000488410 MPRIPQ6WCQ1 1025 aa13.56□□□□□ -0.24
TM2D1-209ENST00000488410 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
TM2D1-209ENST00000488410 RTL1A6NKG5 1358 aa13.56□□□□□ -0.24
TM2D1-209ENST00000488410 DOT1LQ8TEK3 1739 aa13.56□□□□□ -0.24
TM2D1-209ENST00000488410 CHD4Q14839 1912 aa13.55□□□□□ -0.24
TM2D1-209ENST00000488410 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
TM2D1-209ENST00000488410 CARD14Q9BXL6 1004 aa13.54□□□□□ -0.24
TM2D1-209ENST00000488410 TIMELESSQ9UNS1 1208 aa13.54□□□□□ -0.24
TM2D1-209ENST00000488410 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
TM2D1-209ENST00000488410 PCDH11XQ9BZA7 1347 aa13.53□□□□□ -0.24
TM2D1-209ENST00000488410 PCDH11YQ9BZA8 1340 aa13.53□□□□□ -0.24
TM2D1-209ENST00000488410 INSRP06213 1382 aa13.53□□□□□ -0.24
TM2D1-209ENST00000488410 FLT4P35916 1363 aa13.53□□□□□ -0.24
TM2D1-209ENST00000488410 MAP2P11137 1827 aaKnown RBP13.53□□□□□ -0.24
TM2D1-209ENST00000488410 SPG7Q9UQ90 795 aa13.52□□□□□ -0.25
TM2D1-209ENST00000488410 PNPLA7Q6ZV29 1317 aa13.52□□□□□ -0.25
TM2D1-209ENST00000488410 MEGF6O75095 1541 aa13.52□□□□□ -0.25
TM2D1-209ENST00000488410 NSD3Q9BZ95 1437 aa13.51□□□□□ -0.25
TM2D1-209ENST00000488410 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
TM2D1-209ENST00000488410 EMILIN1Q9Y6C2 1016 aa13.51□□□□□ -0.25
TM2D1-209ENST00000488410 LY75O60449 1722 aa13.5□□□□□ -0.25
TM2D1-209ENST00000488410 PAPPAQ13219 1627 aa13.5□□□□□ -0.25
TM2D1-209ENST00000488410 COL23A1Q86Y22 540 aaPredicted RBP13.5□□□□□ -0.25
TM2D1-209ENST00000488410 SMARCC1Q92922 1105 aaPredicted RBP13.5□□□□□ -0.25
TM2D1-209ENST00000488410 QSER1Q2KHR3 1735 aa13.5□□□□□ -0.25
TM2D1-209ENST00000488410 SHANK3Q9BYB0 1731 aa13.5□□□□□ -0.25
TM2D1-209ENST00000488410 KIF24Q5T7B8 1368 aa13.49□□□□□ -0.25
TM2D1-209ENST00000488410 ZNF784Q8NCA9 323 aaPredicted RBP13.49□□□□□ -0.25
TM2D1-209ENST00000488410 FLAD1Q8NFF5 587 aa13.49□□□□□ -0.25
TM2D1-209ENST00000488410 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
TM2D1-209ENST00000488410 AK7Q96M32 723 aa13.48□□□□□ -0.25
TM2D1-209ENST00000488410 TUBGCP6Q96RT7 1819 aa13.48□□□□□ -0.25
TM2D1-209ENST00000488410 NSD2O96028 1365 aa13.47□□□□□ -0.25
TM2D1-209ENST00000488410 CYP27B1O15528 508 aa13.47□□□□□ -0.25
TM2D1-209ENST00000488410 ITGB4P16144 1822 aa13.47□□□□□ -0.25
TM2D1-209ENST00000488410 PALLDQ8WX93 1383 aa13.46□□□□□ -0.25
TM2D1-209ENST00000488410 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.25
TM2D1-209ENST00000488410 PHF14O94880 888 aa13.46□□□□□ -0.25
TM2D1-209ENST00000488410 EIF4G2P78344 907 aaKnown RBP eCLIP13.46□□□□□ -0.25
TM2D1-209ENST00000488410 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
TM2D1-209ENST00000488410 EYA1Q99502 592 aa13.46□□□□□ -0.25
TM2D1-209ENST00000488410 TMOD3Q9NYL9 352 aa13.46□□□□□ -0.25
TM2D1-209ENST00000488410 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
TM2D1-209ENST00000488410 GRIN3BO60391 1043 aa13.45□□□□□ -0.26
TM2D1-209ENST00000488410 IFNL2Q8IZJ0 200 aa13.45□□□□□ -0.26
TM2D1-209ENST00000488410 NLGN2Q8NFZ4 835 aa13.45□□□□□ -0.26
TM2D1-209ENST00000488410 PIGBQ92521 554 aa13.45□□□□□ -0.26
TM2D1-209ENST00000488410 POLKQ9UBT6 870 aa13.45□□□□□ -0.26
TM2D1-209ENST00000488410 CLSPNQ9HAW4 1339 aa13.44□□□□□ -0.26
TM2D1-209ENST00000488410 C5P01031 1676 aa13.44□□□□□ -0.26
TM2D1-209ENST00000488410 PANK3Q9H999 370 aa13.43□□□□□ -0.26
TM2D1-209ENST00000488410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.43□□□□□ -0.26
TM2D1-209ENST00000488410 TAF1LQ8IZX4 1826 aa13.43□□□□□ -0.26
TM2D1-209ENST00000488410 ATP6V1AP38606 617 aa13.42□□□□□ -0.26
TM2D1-209ENST00000488410 NKX1-1Q15270 411 aaPredicted RBP13.42□□□□□ -0.26
TM2D1-209ENST00000488410 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.41□□□□□ -0.26
TM2D1-209ENST00000488410 LOC102724428A0A0B4J2F2 783 aa13.41□□□□□ -0.26
TM2D1-209ENST00000488410 HSPA5P11021 654 aaKnown RBP13.41□□□□□ -0.26
TM2D1-209ENST00000488410 SIK1P57059 783 aa13.41□□□□□ -0.26
TM2D1-209ENST00000488410 EIF4A2Q14240 407 aaKnown RBP13.41□□□□□ -0.26
TM2D1-209ENST00000488410 PLEKHO1Q53GL0 409 aaPredicted RBP13.41□□□□□ -0.26
TM2D1-209ENST00000488410 MORC1Q86VD1 984 aa13.41□□□□□ -0.26
TM2D1-209ENST00000488410 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
TM2D1-209ENST00000488410 CD2APQ9Y5K6 639 aa13.41□□□□□ -0.26
TM2D1-209ENST00000488410 COL24A1Q17RW2 1714 aa13.4□□□□□ -0.26
TM2D1-209ENST00000488410 PHKG2P15735 406 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms