RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 API5Q9BZZ5 524 aaKnown RBP20.31■□□□□ 0.84
RAPGEF3-211ENST00000488250 PDZRN3Q9UPQ7 1066 aa20.31■□□□□ 0.84
RAPGEF3-211ENST00000488250 KIF1AQ12756 1690 aa20.3■□□□□ 0.84
RAPGEF3-211ENST00000488250 ELL2O00472 640 aaPredicted RBP20.3■□□□□ 0.84
RAPGEF3-211ENST00000488250 ERICH6Q7L0X2 663 aa20.3■□□□□ 0.84
RAPGEF3-211ENST00000488250 RTF1Q92541 710 aaKnown RBP20.3■□□□□ 0.84
RAPGEF3-211ENST00000488250 VIRMAQ69YN4 1812 aaKnown RBP20.3■□□□□ 0.84
RAPGEF3-211ENST00000488250 SLIT3O75094 1523 aa20.3■□□□□ 0.84
RAPGEF3-211ENST00000488250 PROSER2Q86WR7 435 aaPredicted RBP20.29■□□□□ 0.84
RAPGEF3-211ENST00000488250 MST1RQ04912 1400 aa20.29■□□□□ 0.84
RAPGEF3-211ENST00000488250 ZBTB7BO15156 539 aaPredicted RBP20.28■□□□□ 0.84
RAPGEF3-211ENST00000488250 FOXO3O43524 673 aa20.28■□□□□ 0.84
RAPGEF3-211ENST00000488250 SMC5Q8IY18 1101 aa20.28■□□□□ 0.84
RAPGEF3-211ENST00000488250 C19orf44Q9H6X5 657 aa20.28■□□□□ 0.84
RAPGEF3-211ENST00000488250 NCOA3Q9Y6Q9 1424 aa20.28■□□□□ 0.84
RAPGEF3-211ENST00000488250 ORAI2Q96SN7 254 aa20.27■□□□□ 0.84
RAPGEF3-211ENST00000488250 C1orf167Q5SNV9 1468 aa20.27■□□□□ 0.84
RAPGEF3-211ENST00000488250 TRPM3Q9HCF6 1732 aaPredicted RBP20.27■□□□□ 0.84
RAPGEF3-211ENST00000488250 NPM2Q86SE8 214 aaKnown RBP20.26■□□□□ 0.83
RAPGEF3-211ENST00000488250 ZBTB47Q9UFB7 747 aaPredicted RBP20.26■□□□□ 0.83
RAPGEF3-211ENST00000488250 DCCP43146 1447 aa20.25■□□□□ 0.83
RAPGEF3-211ENST00000488250 GNAT3A8MTJ3 354 aa20.25■□□□□ 0.83
RAPGEF3-211ENST00000488250 MYT1Q01538 1121 aa20.25■□□□□ 0.83
RAPGEF3-211ENST00000488250 USP19O94966 1318 aa20.24■□□□□ 0.83
RAPGEF3-211ENST00000488250 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
RAPGEF3-211ENST00000488250 MAP3K5Q99683 1374 aa20.24■□□□□ 0.83
RAPGEF3-211ENST00000488250 DDRGK1Q96HY6 314 aa20.23■□□□□ 0.83
RAPGEF3-211ENST00000488250 STRCQ7RTU9 1775 aa20.23■□□□□ 0.83
RAPGEF3-211ENST00000488250 MSH6P52701 1360 aa20.23■□□□□ 0.83
RAPGEF3-211ENST00000488250 HSPA2P54652 639 aa20.23■□□□□ 0.83
RAPGEF3-211ENST00000488250 PTPRCP08575 1304 aa20.22■□□□□ 0.83
RAPGEF3-211ENST00000488250 TSPYL4Q9UJ04 414 aa20.22■□□□□ 0.83
RAPGEF3-211ENST00000488250 RGS12O14924 1447 aa20.22■□□□□ 0.83
RAPGEF3-211ENST00000488250 SOS1Q07889 1333 aaPredicted RBP20.22■□□□□ 0.83
RAPGEF3-211ENST00000488250 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
RAPGEF3-211ENST00000488250 INTS3Q68E01 1043 aaKnown RBP20.21■□□□□ 0.83
RAPGEF3-211ENST00000488250 NCAPD2Q15021 1401 aa20.21■□□□□ 0.83
RAPGEF3-211ENST00000488250 GCP02774 474 aa20.21■□□□□ 0.83
RAPGEF3-211ENST00000488250 ARHGEF25Q86VW2 580 aa20.21■□□□□ 0.83
RAPGEF3-211ENST00000488250 LTV1Q96GA3 475 aaPredicted RBP20.21■□□□□ 0.83
RAPGEF3-211ENST00000488250 KRT28Q7Z3Y7 464 aa20.19■□□□□ 0.82
RAPGEF3-211ENST00000488250 AEBP2Q6ZN18 517 aaPredicted RBP20.19■□□□□ 0.82
RAPGEF3-211ENST00000488250 STRCP1A6NGW2 1772 aa20.18■□□□□ 0.82
RAPGEF3-211ENST00000488250 TMEM94Q12767 1356 aa20.18■□□□□ 0.82
RAPGEF3-211ENST00000488250 NBPF6Q5VWK0 638 aa20.18■□□□□ 0.82
RAPGEF3-211ENST00000488250 IL17REQ8NFR9 667 aa20.18■□□□□ 0.82
RAPGEF3-211ENST00000488250 NBPF4Q96M43 638 aa20.18■□□□□ 0.82
RAPGEF3-211ENST00000488250 ALS2Q96Q42 1657 aa20.18■□□□□ 0.82
RAPGEF3-211ENST00000488250 NUCB1Q02818 461 aa20.17■□□□□ 0.82
RAPGEF3-211ENST00000488250 MIS18AQ9NYP9 233 aa20.17■□□□□ 0.82
RAPGEF3-211ENST00000488250 GCC1Q96CN9 775 aa20.17■□□□□ 0.82
RAPGEF3-211ENST00000488250 CEMIPQ8WUJ3 1361 aa20.16■□□□□ 0.82
RAPGEF3-211ENST00000488250 CAMTA1Q9Y6Y1 1673 aa20.16■□□□□ 0.82
RAPGEF3-211ENST00000488250 MED1Q15648 1581 aaPredicted RBP20.16■□□□□ 0.82
RAPGEF3-211ENST00000488250 ATF3P18847 181 aa20.15■□□□□ 0.82
RAPGEF3-211ENST00000488250 TAF7Q15545 349 aaPredicted RBP20.15■□□□□ 0.82
RAPGEF3-211ENST00000488250 XPCQ01831 940 aaPredicted RBP20.15■□□□□ 0.82
RAPGEF3-211ENST00000488250 USHBP1Q8N6Y0 703 aa20.15■□□□□ 0.82
RAPGEF3-211ENST00000488250 SLC4A2P04920 1241 aa20.14■□□□□ 0.81
RAPGEF3-211ENST00000488250 LMO7Q8WWI1 1683 aa20.13■□□□□ 0.81
RAPGEF3-211ENST00000488250 SIRT2Q8IXJ6 389 aa20.13■□□□□ 0.81
RAPGEF3-211ENST00000488250 RGPD2P0DJD1 1756 aa20.12■□□□□ 0.81
RAPGEF3-211ENST00000488250 CADPS2Q86UW7 1296 aa20.12■□□□□ 0.81
RAPGEF3-211ENST00000488250 CHD1LQ86WJ1 897 aa20.12■□□□□ 0.81
RAPGEF3-211ENST00000488250 FAM208AQ9UK61 1670 aaKnown RBP20.11■□□□□ 0.81
RAPGEF3-211ENST00000488250 AMOTQ4VCS5 1084 aa20.11■□□□□ 0.81
RAPGEF3-211ENST00000488250 C1orf115Q9H7X2 142 aa20.11■□□□□ 0.81
RAPGEF3-211ENST00000488250 CCDC30Q5VVM6 783 aa20.1■□□□□ 0.81
RAPGEF3-211ENST00000488250 OVOS2A0A0G2JMS6 1433 aa20.1■□□□□ 0.81
RAPGEF3-211ENST00000488250 SEC24BO95487 1268 aa20.1■□□□□ 0.81
RAPGEF3-211ENST00000488250 PLEKHO1Q53GL0 409 aaPredicted RBP20.1■□□□□ 0.81
RAPGEF3-211ENST00000488250 AKAP4Q5JQC9 854 aa20.1■□□□□ 0.81
RAPGEF3-211ENST00000488250 ANKRD24Q8TF21 1146 aa20.1■□□□□ 0.81
RAPGEF3-211ENST00000488250 STK31Q9BXU1 1019 aa20.1■□□□□ 0.81
RAPGEF3-211ENST00000488250 CACNA1FO60840 1977 aa20.09■□□□□ 0.81
RAPGEF3-211ENST00000488250 LMOD2Q6P5Q4 547 aa20.09■□□□□ 0.81
RAPGEF3-211ENST00000488250 LRRC59Q96AG4 307 aaKnown RBP20.09■□□□□ 0.81
RAPGEF3-211ENST00000488250 ATP10DQ9P241 1426 aa20.08■□□□□ 0.81
RAPGEF3-211ENST00000488250 ZBTB7CA1YPR0 619 aa20.08■□□□□ 0.8
RAPGEF3-211ENST00000488250 CCT4P50991 539 aaKnown RBP20.08■□□□□ 0.8
RAPGEF3-211ENST00000488250 RPAP2Q8IXW5 612 aaPredicted RBP20.08■□□□□ 0.8
RAPGEF3-211ENST00000488250 NPHP3Q7Z494 1330 aa20.07■□□□□ 0.8
RAPGEF3-211ENST00000488250 G2E3Q7L622 706 aa20.07■□□□□ 0.8
RAPGEF3-211ENST00000488250 ANKRD44Q8N8A2 993 aa20.07■□□□□ 0.8
RAPGEF3-211ENST00000488250 ABCC6O95255 1503 aa20.07■□□□□ 0.8
RAPGEF3-211ENST00000488250 KDM3BQ7LBC6 1761 aa20.07■□□□□ 0.8
RAPGEF3-211ENST00000488250 HOXB7P09629 217 aa20.06■□□□□ 0.8
RAPGEF3-211ENST00000488250 LNPKQ9C0E8 428 aa20.06■□□□□ 0.8
RAPGEF3-211ENST00000488250 DCTPP1Q9H773 170 aa20.06■□□□□ 0.8
RAPGEF3-211ENST00000488250 UPF2Q9HAU5 1272 aaKnown RBP20.06■□□□□ 0.8
RAPGEF3-211ENST00000488250 AXIN2Q9Y2T1 843 aa20.06■□□□□ 0.8
RAPGEF3-211ENST00000488250 ZNF530Q6P9A1 599 aaPredicted RBP20.05■□□□□ 0.8
RAPGEF3-211ENST00000488250 CHMP4AQ9BY43 222 aa20.05■□□□□ 0.8
RAPGEF3-211ENST00000488250 ERBB3P21860 1342 aa20.04■□□□□ 0.8
RAPGEF3-211ENST00000488250 ANKRD45Q5TZF3 282 aa20.04■□□□□ 0.8
RAPGEF3-211ENST00000488250 TNS3Q68CZ2 1445 aa20.04■□□□□ 0.8
RAPGEF3-211ENST00000488250 PXDNQ92626 1479 aa20.04■□□□□ 0.8
RAPGEF3-211ENST00000488250 FLIIQ13045 1269 aa20.04■□□□□ 0.8
RAPGEF3-211ENST00000488250 LGR6Q9HBX8 967 aa20.04■□□□□ 0.8
RAPGEF3-211ENST00000488250 PLEKHG2Q9H7P9 1386 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms