RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 ATP10DQ9P241 1426 aa20.15■□□□□ 0.82
GCOM1-210ENST00000488175 CPSF1Q10570 1443 aaKnown RBP20.14■□□□□ 0.82
GCOM1-210ENST00000488175 PREX1Q8TCU6 1659 aa20.14■□□□□ 0.82
GCOM1-210ENST00000488175 CDK12Q9NYV4 1490 aaPredicted RBP20.14■□□□□ 0.81
GCOM1-210ENST00000488175 FOXD4L5Q5VV16 416 aaPredicted RBP20.13■□□□□ 0.81
GCOM1-210ENST00000488175 CASC1Q6TDU7 716 aa20.13■□□□□ 0.81
GCOM1-210ENST00000488175 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
GCOM1-210ENST00000488175 FOXD4L4Q8WXT5 416 aaPredicted RBP20.13■□□□□ 0.81
GCOM1-210ENST00000488175 MIS18AQ9NYP9 233 aa20.13■□□□□ 0.81
GCOM1-210ENST00000488175 RBM27Q9P2N5 1060 aaKnown RBP20.13■□□□□ 0.81
GCOM1-210ENST00000488175 MSH6P52701 1360 aa20.13■□□□□ 0.81
GCOM1-210ENST00000488175 KIF24Q5T7B8 1368 aa20.13■□□□□ 0.81
GCOM1-210ENST00000488175 ST18O60284 1047 aa20.13■□□□□ 0.81
GCOM1-210ENST00000488175 RTL1A6NKG5 1358 aa20.12■□□□□ 0.81
GCOM1-210ENST00000488175 AATKQ6ZMQ8 1374 aa20.12■□□□□ 0.81
GCOM1-210ENST00000488175 ZDHHC9Q9Y397 364 aa20.12■□□□□ 0.81
GCOM1-210ENST00000488175 AK9Q5TCS8 1911 aa20.12■□□□□ 0.81
GCOM1-210ENST00000488175 ZNF445P59923 1031 aa20.12■□□□□ 0.81
GCOM1-210ENST00000488175 RGS12O14924 1447 aa20.12■□□□□ 0.81
GCOM1-210ENST00000488175 IBTKQ9P2D0 1353 aaPredicted RBP20.11■□□□□ 0.81
GCOM1-210ENST00000488175 CHL1O00533 1208 aa20.11■□□□□ 0.81
GCOM1-210ENST00000488175 EIF4A2Q14240 407 aaKnown RBP20.11■□□□□ 0.81
GCOM1-210ENST00000488175 ZSCAN30Q86W11 494 aa20.11■□□□□ 0.81
GCOM1-210ENST00000488175 RBSNQ9H1K0 784 aa20.11■□□□□ 0.81
GCOM1-210ENST00000488175 SLC4A2P04920 1241 aa20.11■□□□□ 0.81
GCOM1-210ENST00000488175 CCDC61Q9Y6R9 512 aa20.11■□□□□ 0.81
GCOM1-210ENST00000488175 PRIM1P49642 420 aaKnown RBP20.1■□□□□ 0.81
GCOM1-210ENST00000488175 SLC4A10Q6U841 1118 aa20.1■□□□□ 0.81
GCOM1-210ENST00000488175 GPT2Q8TD30 523 aa20.1■□□□□ 0.81
GCOM1-210ENST00000488175 CPS1P31327 1500 aa20.1■□□□□ 0.81
GCOM1-210ENST00000488175 TSHZ3Q63HK5 1081 aa20.1■□□□□ 0.81
GCOM1-210ENST00000488175 CWC22Q9HCG8 908 aaKnown RBP20.1■□□□□ 0.81
GCOM1-210ENST00000488175 F6X3S4 739 aa20.09■□□□□ 0.81
GCOM1-210ENST00000488175 REREQ9P2R6 1566 aa20.09■□□□□ 0.81
GCOM1-210ENST00000488175 SOX12O15370 315 aa20.08■□□□□ 0.81
GCOM1-210ENST00000488175 RRP9O43818 475 aaKnown RBP20.08■□□□□ 0.81
GCOM1-210ENST00000488175 REC8O95072 547 aa20.08■□□□□ 0.81
GCOM1-210ENST00000488175 KIAA1211Q6ZU35 1233 aa20.08■□□□□ 0.81
GCOM1-210ENST00000488175 ERC2O15083 957 aa20.08■□□□□ 0.8
GCOM1-210ENST00000488175 MLECQ14165 292 aa20.08■□□□□ 0.8
GCOM1-210ENST00000488175 METP08581 1390 aa20.08■□□□□ 0.8
GCOM1-210ENST00000488175 MSNP26038 577 aaKnown RBP20.07■□□□□ 0.8
GCOM1-210ENST00000488175 G2E3Q7L622 706 aa20.07■□□□□ 0.8
GCOM1-210ENST00000488175 NSFL1CQ9UNZ2 370 aaKnown RBP20.07■□□□□ 0.8
GCOM1-210ENST00000488175 NUTM2FA1L443 756 aa20.06■□□□□ 0.8
GCOM1-210ENST00000488175 NEK4P51957 841 aa20.06■□□□□ 0.8
GCOM1-210ENST00000488175 HSP90AB2PQ58FF8 381 aa20.06■□□□□ 0.8
GCOM1-210ENST00000488175 HAP1P54257 671 aaPredicted RBP20.06■□□□□ 0.8
GCOM1-210ENST00000488175 EXOC6BQ9Y2D4 811 aa20.06■□□□□ 0.8
GCOM1-210ENST00000488175 PTPRCP08575 1304 aa20.05■□□□□ 0.8
GCOM1-210ENST00000488175 PDE1AP54750 535 aa20.05■□□□□ 0.8
GCOM1-210ENST00000488175 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
GCOM1-210ENST00000488175 DLG5Q8TDM6 1919 aa20.05■□□□□ 0.8
GCOM1-210ENST00000488175 FOXO3O43524 673 aa20.05■□□□□ 0.8
GCOM1-210ENST00000488175 NOL8Q76FK4 1167 aaKnown RBP20.05■□□□□ 0.8
GCOM1-210ENST00000488175 DLC1Q96QB1 1528 aa20.04■□□□□ 0.8
GCOM1-210ENST00000488175 A2ML1A8K2U0 1454 aa20.04■□□□□ 0.8
GCOM1-210ENST00000488175 TMEM63CQ9P1W3 806 aa20.04■□□□□ 0.8
GCOM1-210ENST00000488175 GLIPR1L2Q4G1C9 344 aa20.04■□□□□ 0.8
GCOM1-210ENST00000488175 RICTORQ6R327 1708 aa20.03■□□□□ 0.8
GCOM1-210ENST00000488175 PRR36Q9H6K5 1346 aa20.03■□□□□ 0.8
GCOM1-210ENST00000488175 SYCE3A1L190 88 aa20.03■□□□□ 0.8
GCOM1-210ENST00000488175 HMMRO75330 724 aa20.03■□□□□ 0.8
GCOM1-210ENST00000488175 TMX3Q96JJ7 454 aa20.03■□□□□ 0.8
GCOM1-210ENST00000488175 TPM2P07951 284 aa20.02■□□□□ 0.8
GCOM1-210ENST00000488175 KIAA0232Q92628 1395 aa20.02■□□□□ 0.79
GCOM1-210ENST00000488175 OFD1O75665 1012 aa20.01■□□□□ 0.79
GCOM1-210ENST00000488175 VSIG10Q8N0Z9 540 aa20.01■□□□□ 0.79
GCOM1-210ENST00000488175 PALD1Q9ULE6 856 aa20.01■□□□□ 0.79
GCOM1-210ENST00000488175 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
GCOM1-210ENST00000488175 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
GCOM1-210ENST00000488175 TSPYL4Q9UJ04 414 aa20■□□□□ 0.79
GCOM1-210ENST00000488175 RNF214Q8ND24 703 aa19.99■□□□□ 0.79
GCOM1-210ENST00000488175 OSBPL3Q9H4L5 887 aa19.99■□□□□ 0.79
GCOM1-210ENST00000488175 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.99■□□□□ 0.79
GCOM1-210ENST00000488175 PDLIM2Q96JY6 352 aa19.99■□□□□ 0.79
GCOM1-210ENST00000488175 XPCQ01831 940 aaPredicted RBP19.98■□□□□ 0.79
GCOM1-210ENST00000488175 RILPL2Q969X0 211 aa19.98■□□□□ 0.79
GCOM1-210ENST00000488175 TTC21BQ7Z4L5 1316 aa19.98■□□□□ 0.79
GCOM1-210ENST00000488175 LRSAM1Q6UWE0 723 aa19.98■□□□□ 0.79
GCOM1-210ENST00000488175 NECTIN2Q92692 538 aa19.98■□□□□ 0.79
GCOM1-210ENST00000488175 NOL7Q9UMY1 257 aaKnown RBP19.98■□□□□ 0.79
GCOM1-210ENST00000488175 TRIM6-TRIM34B2RNG4 842 aa19.97■□□□□ 0.79
GCOM1-210ENST00000488175 ESYT1Q9BSJ8 1104 aa19.97■□□□□ 0.79
GCOM1-210ENST00000488175 ANO2Q9NQ90 1003 aa19.97■□□□□ 0.79
GCOM1-210ENST00000488175 RIMBP3CA6NJZ7 1639 aa19.97■□□□□ 0.79
GCOM1-210ENST00000488175 RIMBP3BA6NNM3 1639 aa19.97■□□□□ 0.79
GCOM1-210ENST00000488175 RIMBP3Q9UFD9 1639 aa19.97■□□□□ 0.79
GCOM1-210ENST00000488175 GNAI2P04899 355 aa19.97■□□□□ 0.79
GCOM1-210ENST00000488175 MTHFSDQ2M296 383 aaKnown RBP19.97■□□□□ 0.79
GCOM1-210ENST00000488175 R3HCC1Q9Y3T6 440 aaKnown RBP19.97■□□□□ 0.79
GCOM1-210ENST00000488175 CRB1P82279 1406 aa19.96■□□□□ 0.79
GCOM1-210ENST00000488175 CCT4P50991 539 aaKnown RBP19.96■□□□□ 0.79
GCOM1-210ENST00000488175 PNMA6EA0A0J9YXQ4 647 aa19.96■□□□□ 0.79
GCOM1-210ENST00000488175 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.96■□□□□ 0.79
GCOM1-210ENST00000488175 ACEP12821 1306 aa19.96■□□□□ 0.79
GCOM1-210ENST00000488175 RTF1Q92541 710 aaKnown RBP19.95■□□□□ 0.78
GCOM1-210ENST00000488175 HS1BP3Q53T59 392 aa19.95■□□□□ 0.78
GCOM1-210ENST00000488175 UPF3BQ9BZI7 483 aaKnown RBP19.95■□□□□ 0.78
GCOM1-210ENST00000488175 LRRCC1Q9C099 1032 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms