RNA–Protein interactions for RNA: ENST00000488145.1

NPDC1-205, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-205ENST00000488145 NHSQ6T4R5 1651 aa24.59■■□□□ 1.53
NPDC1-205ENST00000488145 DDX54Q8TDD1 881 aaKnown RBP24.59■■□□□ 1.53
NPDC1-205ENST00000488145 PKD1L3Q7Z443 1732 aa24.58■■□□□ 1.53
NPDC1-205ENST00000488145 MTHFSP49914 203 aa24.58■■□□□ 1.53
NPDC1-205ENST00000488145 EN1Q05925 392 aaPredicted RBP24.58■■□□□ 1.53
NPDC1-205ENST00000488145 BCL11BQ9C0K0 894 aaPredicted RBP24.56■■□□□ 1.52
NPDC1-205ENST00000488145 IGSF1Q8N6C5 1336 aa24.55■■□□□ 1.52
NPDC1-205ENST00000488145 RGPD3A6NKT7 1758 aaPredicted RBP24.54■■□□□ 1.52
NPDC1-205ENST00000488145 RGPD4Q7Z3J3 1758 aa24.54■■□□□ 1.52
NPDC1-205ENST00000488145 DOT1LQ8TEK3 1739 aa24.54■■□□□ 1.52
NPDC1-205ENST00000488145 ACSBG1Q96GR2 724 aa24.53■■□□□ 1.52
NPDC1-205ENST00000488145 PCDH11XQ9BZA7 1347 aa24.53■■□□□ 1.52
NPDC1-205ENST00000488145 PCDH11YQ9BZA8 1340 aa24.53■■□□□ 1.52
NPDC1-205ENST00000488145 PARD3Q8TEW0 1356 aa24.53■■□□□ 1.52
NPDC1-205ENST00000488145 RREB1Q92766 1687 aa24.53■■□□□ 1.52
NPDC1-205ENST00000488145 BTAF1O14981 1849 aa24.52■■□□□ 1.52
NPDC1-205ENST00000488145 EZH2Q15910 746 aaKnown RBP24.52■■□□□ 1.52
NPDC1-205ENST00000488145 CAMKK2Q96RR4 588 aa24.52■■□□□ 1.52
NPDC1-205ENST00000488145 PTF1AQ7RTS3 328 aa24.51■■□□□ 1.51
NPDC1-205ENST00000488145 KCNQ2O43526 872 aa24.5■■□□□ 1.51
NPDC1-205ENST00000488145 IL13P35225 146 aa24.5■■□□□ 1.51
NPDC1-205ENST00000488145 SPG7Q9UQ90 795 aa24.5■■□□□ 1.51
NPDC1-205ENST00000488145 NUP188Q5SRE5 1749 aa24.49■■□□□ 1.51
NPDC1-205ENST00000488145 DDX10Q13206 875 aaKnown RBP24.48■■□□□ 1.51
NPDC1-205ENST00000488145 PLEKHG2Q9H7P9 1386 aa24.48■■□□□ 1.51
NPDC1-205ENST00000488145 PLSCR1O15162 318 aa24.47■■□□□ 1.51
NPDC1-205ENST00000488145 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.47■■□□□ 1.51
NPDC1-205ENST00000488145 DIAPH1O60610 1272 aaKnown RBP24.46■■□□□ 1.51
NPDC1-205ENST00000488145 COL3A1P02461 1466 aaPredicted RBP24.45■■□□□ 1.51
NPDC1-205ENST00000488145 SULT6B1Q6IMI4 303 aa24.45■■□□□ 1.5
NPDC1-205ENST00000488145 CYP27B1O15528 508 aa24.44■■□□□ 1.5
NPDC1-205ENST00000488145 PPP2R1AP30153 589 aa24.44■■□□□ 1.5
NPDC1-205ENST00000488145 AEBP1Q8IUX7 1158 aa24.44■■□□□ 1.5
NPDC1-205ENST00000488145 SYTL4Q96C24 671 aaPredicted RBP24.44■■□□□ 1.5
NPDC1-205ENST00000488145 ITGB4P16144 1822 aa24.43■■□□□ 1.5
NPDC1-205ENST00000488145 CFAP53Q96M91 514 aa24.43■■□□□ 1.5
NPDC1-205ENST00000488145 KDRP35968 1356 aa24.42■■□□□ 1.5
NPDC1-205ENST00000488145 TOGARAM1Q9Y4F4 1720 aa24.42■■□□□ 1.5
NPDC1-205ENST00000488145 PRIM1P49642 420 aaKnown RBP24.42■■□□□ 1.5
NPDC1-205ENST00000488145 PLEKHO1Q53GL0 409 aaPredicted RBP24.4■■□□□ 1.5
NPDC1-205ENST00000488145 AMOTQ4VCS5 1084 aa24.39■■□□□ 1.49
NPDC1-205ENST00000488145 IFNL2Q8IZJ0 200 aa24.39■■□□□ 1.49
NPDC1-205ENST00000488145 HMOX1P09601 288 aa24.38■■□□□ 1.49
NPDC1-205ENST00000488145 PHKG2P15735 406 aa24.38■■□□□ 1.49
NPDC1-205ENST00000488145 U2SURPO15042 1029 aaKnown RBP24.37■■□□□ 1.49
NPDC1-205ENST00000488145 NKX1-1Q15270 411 aaPredicted RBP24.37■■□□□ 1.49
NPDC1-205ENST00000488145 TXNRD1Q16881 649 aa24.36■■□□□ 1.49
NPDC1-205ENST00000488145 NBPF14Q5TI25 921 aa24.36■■□□□ 1.49
NPDC1-205ENST00000488145 ZNF530Q6P9A1 599 aaPredicted RBP24.36■■□□□ 1.49
NPDC1-205ENST00000488145 LY75O60449 1722 aa24.35■■□□□ 1.49
NPDC1-205ENST00000488145 PSDA5PKW4 1024 aaPredicted RBP24.34■■□□□ 1.49
NPDC1-205ENST00000488145 PROM2Q8N271 834 aa24.34■■□□□ 1.49
NPDC1-205ENST00000488145 NUDCQ9Y266 331 aa24.34■■□□□ 1.49
NPDC1-205ENST00000488145 R3HDM1Q15032 1099 aaKnown RBP24.33■■□□□ 1.49
NPDC1-205ENST00000488145 RALBP1Q15311 655 aa24.33■■□□□ 1.49
NPDC1-205ENST00000488145 C1orf141Q5JVX7 400 aa24.33■■□□□ 1.49
NPDC1-205ENST00000488145 VIRMAQ69YN4 1812 aaKnown RBP24.33■■□□□ 1.48
NPDC1-205ENST00000488145 HSP90AB1P08238 724 aaKnown RBP24.32■■□□□ 1.48
NPDC1-205ENST00000488145 MPRIPQ6WCQ1 1025 aa24.32■■□□□ 1.48
NPDC1-205ENST00000488145 LRP5O75197 1615 aa24.32■■□□□ 1.48
NPDC1-205ENST00000488145 ZNF316A6NFI3 1004 aaPredicted RBP24.31■■□□□ 1.48
NPDC1-205ENST00000488145 SCN11AQ9UI33 1791 aa24.29■■□□□ 1.48
NPDC1-205ENST00000488145 DCAF5Q96JK2 942 aa24.29■■□□□ 1.48
NPDC1-205ENST00000488145 TMOD3Q9NYL9 352 aa24.28■■□□□ 1.48
NPDC1-205ENST00000488145 SLC27A3Q5K4L6 730 aa24.27■■□□□ 1.48
NPDC1-205ENST00000488145 PAPPAQ13219 1627 aa24.27■■□□□ 1.48
NPDC1-205ENST00000488145 KDM6AO15550 1401 aaPredicted RBP24.27■■□□□ 1.48
NPDC1-205ENST00000488145 U2AF1L5P0DN76 240 aaPredicted RBP24.26■■□□□ 1.47
NPDC1-205ENST00000488145 U2AF1Q01081 240 aaKnown RBP eCLIP24.26■■□□□ 1.47
NPDC1-205ENST00000488145 PIGBQ92521 554 aa24.26■■□□□ 1.47
NPDC1-205ENST00000488145 ANO8Q9HCE9 1232 aaPredicted RBP24.26■■□□□ 1.47
NPDC1-205ENST00000488145 ERVV-2B6SEH9 535 aa24.25■■□□□ 1.47
NPDC1-205ENST00000488145 AKAP4Q5JQC9 854 aa24.25■■□□□ 1.47
NPDC1-205ENST00000488145 MTHFSDQ2M296 383 aaKnown RBP24.24■■□□□ 1.47
NPDC1-205ENST00000488145 SMARCC1Q92922 1105 aaPredicted RBP24.24■■□□□ 1.47
NPDC1-205ENST00000488145 LRRC4BQ9NT99 713 aa24.24■■□□□ 1.47
NPDC1-205ENST00000488145 STK32BQ9NY57 414 aa24.24■■□□□ 1.47
NPDC1-205ENST00000488145 MYBBP1AQ9BQG0 1328 aaKnown RBP24.24■■□□□ 1.47
NPDC1-205ENST00000488145 PALLDQ8WX93 1383 aa24.24■■□□□ 1.47
NPDC1-205ENST00000488145 RSPH6AQ9H0K4 717 aa24.23■■□□□ 1.47
NPDC1-205ENST00000488145 TAF1LQ8IZX4 1826 aa24.22■■□□□ 1.47
NPDC1-205ENST00000488145 PRKAR2BP31323 418 aa24.22■■□□□ 1.47
NPDC1-205ENST00000488145 CCNL1Q9UK58 526 aaPredicted RBP24.22■■□□□ 1.47
NPDC1-205ENST00000488145 C5P01031 1676 aa24.21■■□□□ 1.47
NPDC1-205ENST00000488145 CABP4P57796 275 aa24.21■■□□□ 1.47
NPDC1-205ENST00000488145 KCNQ4P56696 695 aa24.2■■□□□ 1.46
NPDC1-205ENST00000488145 SLC15A2Q16348 729 aa24.2■■□□□ 1.46
NPDC1-205ENST00000488145 GAS2L2Q8NHY3 880 aa24.2■■□□□ 1.46
NPDC1-205ENST00000488145 FCHSD2O94868 740 aa24.19■■□□□ 1.46
NPDC1-205ENST00000488145 ADAMTS7Q9UKP4 1686 aa24.18■■□□□ 1.46
NPDC1-205ENST00000488145 PRKRIP1Q9H875 184 aaPredicted RBP24.18■■□□□ 1.46
NPDC1-205ENST00000488145 ASAP1Q9ULH1 1129 aa24.18■■□□□ 1.46
NPDC1-205ENST00000488145 CASZ1Q86V15 1759 aa24.18■■□□□ 1.46
NPDC1-205ENST00000488145 QSER1Q2KHR3 1735 aa24.18■■□□□ 1.46
NPDC1-205ENST00000488145 TUBGCP6Q96RT7 1819 aa24.17■■□□□ 1.46
NPDC1-205ENST00000488145 MAP3K5Q99683 1374 aa24.16■■□□□ 1.46
NPDC1-205ENST00000488145 RNMTO43148 476 aaKnown RBP24.15■■□□□ 1.46
NPDC1-205ENST00000488145 HMGB2P26583 209 aaKnown RBP24.15■■□□□ 1.46
NPDC1-205ENST00000488145 ZNF827Q17R98 1081 aa24.15■■□□□ 1.46
NPDC1-205ENST00000488145 PHACTR3Q96KR7 559 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms