RNA–Protein interactions for RNA: ENST00000488025.1

CPA4-207, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-207ENST00000488025 CABP1Q9NZU7 370 aa12.12□□□□□ -0.47
CPA4-207ENST00000488025 CCDC88AQ3V6T2 1871 aa12.12□□□□□ -0.47
CPA4-207ENST00000488025 BRCA1P38398 1863 aaKnown RBP12.11□□□□□ -0.47
CPA4-207ENST00000488025 NLRP2Q9NX02 1062 aa12.11□□□□□ -0.47
CPA4-207ENST00000488025 SBF1O95248 1867 aa12.1□□□□□ -0.47
CPA4-207ENST00000488025 PRELPP51888 382 aa12.1□□□□□ -0.47
CPA4-207ENST00000488025 SYTL4Q96C24 671 aaPredicted RBP12.1□□□□□ -0.47
CPA4-207ENST00000488025 KIF13BQ9NQT8 1826 aa12.09□□□□□ -0.47
CPA4-207ENST00000488025 IL2RBP14784 551 aa12.09□□□□□ -0.47
CPA4-207ENST00000488025 SLC27A3Q5K4L6 730 aa12.09□□□□□ -0.47
CPA4-207ENST00000488025 FAM208AQ9UK61 1670 aaKnown RBP12.09□□□□□ -0.47
CPA4-207ENST00000488025 IGSF1Q8N6C5 1336 aa12.09□□□□□ -0.47
CPA4-207ENST00000488025 CICQ96RK0 1608 aaPredicted RBP12.08□□□□□ -0.48
CPA4-207ENST00000488025 DDX54Q8TDD1 881 aaKnown RBP12.08□□□□□ -0.48
CPA4-207ENST00000488025 C4BP0C0L5 1744 aa12.07□□□□□ -0.48
CPA4-207ENST00000488025 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
CPA4-207ENST00000488025 NMRK2Q9NPI5 230 aa12.07□□□□□ -0.48
CPA4-207ENST00000488025 ARFGEF1Q9Y6D6 1849 aa12.07□□□□□ -0.48
CPA4-207ENST00000488025 NSD2O96028 1365 aa12.06□□□□□ -0.48
CPA4-207ENST00000488025 PRIM1P49642 420 aaKnown RBP12.06□□□□□ -0.48
CPA4-207ENST00000488025 NBPF1Q3BBV0 1214 aa12.06□□□□□ -0.48
CPA4-207ENST00000488025 KLRG1Q96E93 195 aa12.06□□□□□ -0.48
CPA4-207ENST00000488025 CCNL1Q9UK58 526 aaPredicted RBP12.06□□□□□ -0.48
CPA4-207ENST00000488025 CD2APQ9Y5K6 639 aa12.06□□□□□ -0.48
CPA4-207ENST00000488025 TTC21BQ7Z4L5 1316 aa12.06□□□□□ -0.48
CPA4-207ENST00000488025 TOMM70O94826 608 aa12.05□□□□□ -0.48
CPA4-207ENST00000488025 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
CPA4-207ENST00000488025 ERBB3P21860 1342 aa12.05□□□□□ -0.48
CPA4-207ENST00000488025 JMYQ8N9B5 988 aa12.03□□□□□ -0.48
CPA4-207ENST00000488025 ANKRD24Q8TF21 1146 aa12.03□□□□□ -0.48
CPA4-207ENST00000488025 CENPJQ9HC77 1338 aaPredicted RBP12.03□□□□□ -0.48
CPA4-207ENST00000488025 TNRC6CQ9HCJ0 1690 aaKnown RBP12.03□□□□□ -0.48
CPA4-207ENST00000488025 AMIGO3Q86WK7 504 aa12.02□□□□□ -0.49
CPA4-207ENST00000488025 ANKRD36BQ8N2N9 1353 aa12.02□□□□□ -0.49
CPA4-207ENST00000488025 SLC34A2O95436 690 aa12.01□□□□□ -0.49
CPA4-207ENST00000488025 KCNA4P22459 653 aa12.01□□□□□ -0.49
CPA4-207ENST00000488025 LTV1Q96GA3 475 aaPredicted RBP12.01□□□□□ -0.49
CPA4-207ENST00000488025 MAP2P11137 1827 aaKnown RBP12.01□□□□□ -0.49
CPA4-207ENST00000488025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12□□□□□ -0.49
CPA4-207ENST00000488025 PHF14O94880 888 aa11.99□□□□□ -0.49
CPA4-207ENST00000488025 KCPQ6ZWJ8 1503 aa11.99□□□□□ -0.49
CPA4-207ENST00000488025 KTN1Q86UP2 1357 aaKnown RBP11.98□□□□□ -0.49
CPA4-207ENST00000488025 MEGF6O75095 1541 aa11.97□□□□□ -0.49
CPA4-207ENST00000488025 USP47Q96K76 1375 aa11.97□□□□□ -0.49
CPA4-207ENST00000488025 RAB3GAP2Q9H2M9 1393 aa11.97□□□□□ -0.49
CPA4-207ENST00000488025 TTC21AQ8NDW8 1320 aa11.97□□□□□ -0.49
CPA4-207ENST00000488025 HSPA1AP0DMV8 641 aaKnown RBP11.97□□□□□ -0.49
CPA4-207ENST00000488025 HSPA1BP0DMV9 641 aaKnown RBP11.97□□□□□ -0.49
CPA4-207ENST00000488025 NME9Q86XW9 330 aa11.97□□□□□ -0.49
CPA4-207ENST00000488025 RBM46Q8TBY0 533 aaKnown RBP11.97□□□□□ -0.49
CPA4-207ENST00000488025 PXDNLA1KZ92 1463 aa11.96□□□□□ -0.49
CPA4-207ENST00000488025 C16orf71Q8IYS4 520 aaPredicted RBP11.96□□□□□ -0.49
CPA4-207ENST00000488025 BCS1LQ9Y276 419 aa11.96□□□□□ -0.49
CPA4-207ENST00000488025 TIAM2Q8IVF5 1701 aa11.95□□□□□ -0.5
CPA4-207ENST00000488025 MAPK8IP2Q13387 824 aaPredicted RBP11.95□□□□□ -0.5
CPA4-207ENST00000488025 ARHGAP27Q6ZUM4 889 aa11.95□□□□□ -0.5
CPA4-207ENST00000488025 C4AP0C0L4 1744 aa11.94□□□□□ -0.5
CPA4-207ENST00000488025 EVC2Q86UK5 1308 aa11.93□□□□□ -0.5
CPA4-207ENST00000488025 A0A0G2JLW4 131 aa11.93□□□□□ -0.5
CPA4-207ENST00000488025 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
CPA4-207ENST00000488025 ZNF692Q9BU19 519 aaPredicted RBP11.93□□□□□ -0.5
CPA4-207ENST00000488025 RRAGCQ9HB90 399 aa11.93□□□□□ -0.5
CPA4-207ENST00000488025 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
CPA4-207ENST00000488025 MYH14Q7Z406 1995 aaKnown RBP11.92□□□□□ -0.5
CPA4-207ENST00000488025 C9orf131Q5VYM1 1079 aa11.92□□□□□ -0.5
CPA4-207ENST00000488025 ZCRB1Q8TBF4 217 aaKnown RBP11.92□□□□□ -0.5
CPA4-207ENST00000488025 AK7Q96M32 723 aa11.92□□□□□ -0.5
CPA4-207ENST00000488025 USP31Q70CQ4 1352 aa11.92□□□□□ -0.5
CPA4-207ENST00000488025 CD163L1Q9NR16 1453 aa11.91□□□□□ -0.5
CPA4-207ENST00000488025 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
CPA4-207ENST00000488025 FBLN1P23142 703 aa11.91□□□□□ -0.5
CPA4-207ENST00000488025 USHBP1Q8N6Y0 703 aa11.91□□□□□ -0.5
CPA4-207ENST00000488025 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
CPA4-207ENST00000488025 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.5
CPA4-207ENST00000488025 FSTL1Q12841 308 aa11.9□□□□□ -0.5
CPA4-207ENST00000488025 CACNA1SQ13698 1873 aa11.9□□□□□ -0.5
CPA4-207ENST00000488025 SBNO2Q9Y2G9 1366 aa11.9□□□□□ -0.5
CPA4-207ENST00000488025 DICER1Q9UPY3 1922 aaKnown RBP11.9□□□□□ -0.51
CPA4-207ENST00000488025 COL5A3P25940 1745 aaPredicted RBP11.89□□□□□ -0.51
CPA4-207ENST00000488025 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
CPA4-207ENST00000488025 FCHSD2O94868 740 aa11.89□□□□□ -0.51
CPA4-207ENST00000488025 MPRIPQ6WCQ1 1025 aa11.89□□□□□ -0.51
CPA4-207ENST00000488025 MMP10P09238 476 aa11.88□□□□□ -0.51
CPA4-207ENST00000488025 DPEP1P16444 411 aa11.88□□□□□ -0.51
CPA4-207ENST00000488025 IP6K1Q92551 441 aa11.88□□□□□ -0.51
CPA4-207ENST00000488025 LINC00116Q8NCU8 138 aa11.87□□□□□ -0.51
CPA4-207ENST00000488025 C10orf71Q711Q0 1435 aa11.86□□□□□ -0.51
CPA4-207ENST00000488025 RNF181Q9P0P0 153 aa11.86□□□□□ -0.51
CPA4-207ENST00000488025 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
CPA4-207ENST00000488025 FAM161AQ3B820 660 aa11.85□□□□□ -0.51
CPA4-207ENST00000488025 SMC1BQ8NDV3 1235 aa11.85□□□□□ -0.51
CPA4-207ENST00000488025 KDM2BQ8NHM5 1336 aa11.85□□□□□ -0.51
CPA4-207ENST00000488025 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
CPA4-207ENST00000488025 GNPATO15228 680 aa11.84□□□□□ -0.51
CPA4-207ENST00000488025 SSFA2P28290 1259 aa11.84□□□□□ -0.51
CPA4-207ENST00000488025 HOXC9P31274 260 aa11.84□□□□□ -0.51
CPA4-207ENST00000488025 NBPF6Q5VWK0 638 aa11.84□□□□□ -0.51
CPA4-207ENST00000488025 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
CPA4-207ENST00000488025 NBPF4Q96M43 638 aa11.84□□□□□ -0.51
CPA4-207ENST00000488025 MAP3K19Q56UN5 1328 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms