RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 NME9Q86XW9 330 aa12.1□□□□□ -0.47
PRKCB-208ENST00000487674 TMC1Q8TDI8 760 aa12.1□□□□□ -0.47
PRKCB-208ENST00000487674 PUS7Q96PZ0 661 aaKnown RBP12.09□□□□□ -0.47
PRKCB-208ENST00000487674 TERF2IPQ9NYB0 399 aa12.09□□□□□ -0.47
PRKCB-208ENST00000487674 EXOC5O00471 708 aa12.08□□□□□ -0.48
PRKCB-208ENST00000487674 CLCN6P51797 869 aa12.08□□□□□ -0.48
PRKCB-208ENST00000487674 PTF1AQ7RTS3 328 aa12.08□□□□□ -0.48
PRKCB-208ENST00000487674 SLC12A5Q9H2X9 1139 aa12.08□□□□□ -0.48
PRKCB-208ENST00000487674 SPON1Q9HCB6 807 aa12.08□□□□□ -0.48
PRKCB-208ENST00000487674 ANO8Q9HCE9 1232 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-208ENST00000487674 KCNQ2O43526 872 aa12.07□□□□□ -0.48
PRKCB-208ENST00000487674 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
PRKCB-208ENST00000487674 NLRP2Q9NX02 1062 aa12.06□□□□□ -0.48
PRKCB-208ENST00000487674 PAPPAQ13219 1627 aa12.05□□□□□ -0.48
PRKCB-208ENST00000487674 BTAF1O14981 1849 aa12.05□□□□□ -0.48
PRKCB-208ENST00000487674 IL2RBP14784 551 aa12.05□□□□□ -0.48
PRKCB-208ENST00000487674 PROM2Q8N271 834 aa12.05□□□□□ -0.48
PRKCB-208ENST00000487674 ANKRD24Q8TF21 1146 aa12.05□□□□□ -0.48
PRKCB-208ENST00000487674 TESK2Q96S53 571 aa12.05□□□□□ -0.48
PRKCB-208ENST00000487674 PPP1R1BQ9UD71 204 aaPredicted RBP12.05□□□□□ -0.48
PRKCB-208ENST00000487674 MYOM1P52179 1685 aa12.04□□□□□ -0.48
PRKCB-208ENST00000487674 SLC24A1O60721 1099 aa12.04□□□□□ -0.48
PRKCB-208ENST00000487674 TXNRD1Q16881 649 aa12.04□□□□□ -0.48
PRKCB-208ENST00000487674 STK32BQ9NY57 414 aa12.03□□□□□ -0.48
PRKCB-208ENST00000487674 ST20-MTHFSA0A0A6YYL1 179 aa12.02□□□□□ -0.49
PRKCB-208ENST00000487674 IP6K1Q92551 441 aa12.02□□□□□ -0.49
PRKCB-208ENST00000487674 DCBLD2Q96PD2 775 aa12.02□□□□□ -0.49
PRKCB-208ENST00000487674 ANKRD36BQ8N2N9 1353 aa12.02□□□□□ -0.49
PRKCB-208ENST00000487674 SLC15A2Q16348 729 aa12.01□□□□□ -0.49
PRKCB-208ENST00000487674 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
PRKCB-208ENST00000487674 COG3Q96JB2 828 aa12.01□□□□□ -0.49
PRKCB-208ENST00000487674 RTL1A6NKG5 1358 aa12.01□□□□□ -0.49
PRKCB-208ENST00000487674 SHANK3Q9BYB0 1731 aa12□□□□□ -0.49
PRKCB-208ENST00000487674 KIF20BQ96Q89 1820 aa12□□□□□ -0.49
PRKCB-208ENST00000487674 PDGFDQ9GZP0 370 aaPredicted RBP12□□□□□ -0.49
PRKCB-208ENST00000487674 MAP3K19Q56UN5 1328 aa12□□□□□ -0.49
PRKCB-208ENST00000487674 USP47Q96K76 1375 aa12□□□□□ -0.49
PRKCB-208ENST00000487674 DOT1LQ8TEK3 1739 aa12□□□□□ -0.49
PRKCB-208ENST00000487674 RGPD2P0DJD1 1756 aa12□□□□□ -0.49
PRKCB-208ENST00000487674 ZBTB7AO95365 584 aa11.99□□□□□ -0.49
PRKCB-208ENST00000487674 PTGER2P43116 358 aa11.99□□□□□ -0.49
PRKCB-208ENST00000487674 QSER1Q2KHR3 1735 aa11.99□□□□□ -0.49
PRKCB-208ENST00000487674 KAT6BQ8WYB5 2073 aa11.99□□□□□ -0.49
PRKCB-208ENST00000487674 HOXC9P31274 260 aa11.98□□□□□ -0.49
PRKCB-208ENST00000487674 MTFR1LQ9H019 292 aa11.98□□□□□ -0.49
PRKCB-208ENST00000487674 MEGF6O75095 1541 aa11.97□□□□□ -0.49
PRKCB-208ENST00000487674 GALR2O43603 387 aaPredicted RBP11.97□□□□□ -0.49
PRKCB-208ENST00000487674 YY1P25490 414 aa11.97□□□□□ -0.49
PRKCB-208ENST00000487674 AMPHP49418 695 aa11.97□□□□□ -0.49
PRKCB-208ENST00000487674 TMF1P82094 1093 aa11.97□□□□□ -0.49
PRKCB-208ENST00000487674 LTV1Q96GA3 475 aaPredicted RBP11.97□□□□□ -0.49
PRKCB-208ENST00000487674 SMG6Q86US8 1419 aaKnown RBP11.96□□□□□ -0.49
PRKCB-208ENST00000487674 LY75O60449 1722 aa11.96□□□□□ -0.49
PRKCB-208ENST00000487674 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
PRKCB-208ENST00000487674 DDX54Q8TDD1 881 aaKnown RBP11.95□□□□□ -0.5
PRKCB-208ENST00000487674 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
PRKCB-208ENST00000487674 FYB1O15117 783 aa11.94□□□□□ -0.5
PRKCB-208ENST00000487674 ZNF827Q17R98 1081 aa11.94□□□□□ -0.5
PRKCB-208ENST00000487674 CDCA8Q53HL2 280 aa11.94□□□□□ -0.5
PRKCB-208ENST00000487674 SLC27A3Q5K4L6 730 aa11.94□□□□□ -0.5
PRKCB-208ENST00000487674 SGIP1Q9BQI5 828 aa11.94□□□□□ -0.5
PRKCB-208ENST00000487674 LRRC4BQ9NT99 713 aa11.94□□□□□ -0.5
PRKCB-208ENST00000487674 COL24A1Q17RW2 1714 aa11.94□□□□□ -0.5
PRKCB-208ENST00000487674 NSD2O96028 1365 aa11.93□□□□□ -0.5
PRKCB-208ENST00000487674 KIF24Q5T7B8 1368 aa11.93□□□□□ -0.5
PRKCB-208ENST00000487674 CGNL1Q0VF96 1302 aa11.93□□□□□ -0.5
PRKCB-208ENST00000487674 FBLN1P23142 703 aa11.93□□□□□ -0.5
PRKCB-208ENST00000487674 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
PRKCB-208ENST00000487674 RRS1Q15050 365 aaKnown RBP11.93□□□□□ -0.5
PRKCB-208ENST00000487674 FHDC1Q9C0D6 1143 aaPredicted RBP11.93□□□□□ -0.5
PRKCB-208ENST00000487674 GGNBP2Q9H3C7 697 aa11.93□□□□□ -0.5
PRKCB-208ENST00000487674 ANKRD26Q9UPS8 1709 aa11.93□□□□□ -0.5
PRKCB-208ENST00000487674 INSRP06213 1382 aa11.92□□□□□ -0.5
PRKCB-208ENST00000487674 FLT4P35916 1363 aa11.92□□□□□ -0.5
PRKCB-208ENST00000487674 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
PRKCB-208ENST00000487674 ZCRB1Q8TBF4 217 aaKnown RBP11.92□□□□□ -0.5
PRKCB-208ENST00000487674 PRIM1P49642 420 aaKnown RBP11.91□□□□□ -0.5
PRKCB-208ENST00000487674 SYTL4Q96C24 671 aaPredicted RBP11.91□□□□□ -0.5
PRKCB-208ENST00000487674 PHF12Q96QT6 1004 aa11.91□□□□□ -0.5
PRKCB-208ENST00000487674 SYT17Q9BSW7 474 aa11.91□□□□□ -0.5
PRKCB-208ENST00000487674 NBPF6Q5VWK0 638 aa11.9□□□□□ -0.5
PRKCB-208ENST00000487674 PKD1L3Q7Z443 1732 aa11.9□□□□□ -0.5
PRKCB-208ENST00000487674 RAPGEF4Q8WZA2 1011 aa11.9□□□□□ -0.5
PRKCB-208ENST00000487674 NBPF4Q96M43 638 aa11.9□□□□□ -0.5
PRKCB-208ENST00000487674 ARXQ96QS3 562 aa11.9□□□□□ -0.5
PRKCB-208ENST00000487674 NSD3Q9BZ95 1437 aa11.9□□□□□ -0.5
PRKCB-208ENST00000487674 C5P01031 1676 aa11.9□□□□□ -0.5
PRKCB-208ENST00000487674 PNPLA7Q6ZV29 1317 aa11.89□□□□□ -0.51
PRKCB-208ENST00000487674 USHBP1Q8N6Y0 703 aa11.89□□□□□ -0.51
PRKCB-208ENST00000487674 SLC16A10Q8TF71 515 aa11.89□□□□□ -0.51
PRKCB-208ENST00000487674 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
PRKCB-208ENST00000487674 CHD4Q14839 1912 aa11.89□□□□□ -0.51
PRKCB-208ENST00000487674 PCDH11XQ9BZA7 1347 aa11.88□□□□□ -0.51
PRKCB-208ENST00000487674 PCDH11YQ9BZA8 1340 aa11.88□□□□□ -0.51
PRKCB-208ENST00000487674 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
PRKCB-208ENST00000487674 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
PRKCB-208ENST00000487674 TFCP2L1Q9NZI6 479 aa11.88□□□□□ -0.51
PRKCB-208ENST00000487674 TOGARAM1Q9Y4F4 1720 aa11.88□□□□□ -0.51
PRKCB-208ENST00000487674 HSP90AB2PQ58FF8 381 aa11.87□□□□□ -0.51
PRKCB-208ENST00000487674 CARD14Q9BXL6 1004 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms