RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 FOXO3O43524 673 aa14.35□□□□□ -0.11
TRA2B-214ENST00000487615 MCM2P49736 904 aa14.35□□□□□ -0.11
TRA2B-214ENST00000487615 TRMT2AQ8IZ69 625 aaKnown RBP14.35□□□□□ -0.11
TRA2B-214ENST00000487615 RNF17Q9BXT8 1623 aaKnown RBP14.34□□□□□ -0.11
TRA2B-214ENST00000487615 NUCB1Q02818 461 aa14.34□□□□□ -0.11
TRA2B-214ENST00000487615 ERC1Q8IUD2 1116 aa14.34□□□□□ -0.11
TRA2B-214ENST00000487615 TSPYL6Q8N831 410 aa14.34□□□□□ -0.11
TRA2B-214ENST00000487615 TBC1D2Q9BYX2 928 aa14.34□□□□□ -0.11
TRA2B-214ENST00000487615 MCTP1Q6DN14 999 aa14.33□□□□□ -0.11
TRA2B-214ENST00000487615 KIF3AQ9Y496 699 aa14.33□□□□□ -0.11
TRA2B-214ENST00000487615 ZC3H6P61129 1189 aaKnown RBP14.33□□□□□ -0.12
TRA2B-214ENST00000487615 FLIIQ13045 1269 aa14.33□□□□□ -0.12
TRA2B-214ENST00000487615 ZBTB40Q9NUA8 1239 aa14.33□□□□□ -0.12
TRA2B-214ENST00000487615 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
TRA2B-214ENST00000487615 POLR1AO95602 1720 aaPredicted RBP14.33□□□□□ -0.12
TRA2B-214ENST00000487615 SPG7Q9UQ90 795 aa14.33□□□□□ -0.12
TRA2B-214ENST00000487615 IL13P35225 146 aa14.33□□□□□ -0.12
TRA2B-214ENST00000487615 TBX22Q9Y458 520 aa14.33□□□□□ -0.12
TRA2B-214ENST00000487615 FLT4P35916 1363 aa14.32□□□□□ -0.12
TRA2B-214ENST00000487615 SMARCA5O60264 1052 aaPredicted RBP14.32□□□□□ -0.12
TRA2B-214ENST00000487615 AMOTQ4VCS5 1084 aa14.32□□□□□ -0.12
TRA2B-214ENST00000487615 IL1RAPL2Q9NP60 686 aa14.32□□□□□ -0.12
TRA2B-214ENST00000487615 LRRFIP1Q32MZ4 808 aaKnown RBP14.32□□□□□ -0.12
TRA2B-214ENST00000487615 LAMC1P11047 1609 aa14.32□□□□□ -0.12
TRA2B-214ENST00000487615 MCM4P33991 863 aa14.31□□□□□ -0.12
TRA2B-214ENST00000487615 SMC5Q8IY18 1101 aa14.31□□□□□ -0.12
TRA2B-214ENST00000487615 GNL2Q13823 731 aaKnown RBP14.31□□□□□ -0.12
TRA2B-214ENST00000487615 SMC3Q9UQE7 1217 aa14.31□□□□□ -0.12
TRA2B-214ENST00000487615 ARHGAP31Q2M1Z3 1444 aa14.31□□□□□ -0.12
TRA2B-214ENST00000487615 GOLGA6L6A8MZA4 724 aa14.3□□□□□ -0.12
TRA2B-214ENST00000487615 TMEM2Q9UHN6 1383 aa14.3□□□□□ -0.12
TRA2B-214ENST00000487615 MX1P20591 662 aa14.29□□□□□ -0.12
TRA2B-214ENST00000487615 FSD1Q9BTV5 496 aa14.29□□□□□ -0.12
TRA2B-214ENST00000487615 MRE11P49959 708 aa14.29□□□□□ -0.12
TRA2B-214ENST00000487615 CWC22Q9HCG8 908 aaKnown RBP14.29□□□□□ -0.12
TRA2B-214ENST00000487615 MAP3K19Q56UN5 1328 aa14.29□□□□□ -0.12
TRA2B-214ENST00000487615 TBC1D9Q6ZT07 1266 aa14.29□□□□□ -0.12
TRA2B-214ENST00000487615 KIAA2012Q0VF49 1180 aa14.29□□□□□ -0.12
TRA2B-214ENST00000487615 DRC7Q8IY82 874 aa14.29□□□□□ -0.12
TRA2B-214ENST00000487615 FAM184AQ8NB25 1140 aa14.29□□□□□ -0.12
TRA2B-214ENST00000487615 SIRT1Q96EB6 747 aa14.29□□□□□ -0.12
TRA2B-214ENST00000487615 MPRIPQ6WCQ1 1025 aa14.28□□□□□ -0.12
TRA2B-214ENST00000487615 CABP4P57796 275 aa14.28□□□□□ -0.12
TRA2B-214ENST00000487615 MTHFSDQ2M296 383 aaKnown RBP14.28□□□□□ -0.12
TRA2B-214ENST00000487615 MEIS3Q99687 375 aa14.28□□□□□ -0.12
TRA2B-214ENST00000487615 H3BQV1 296 aa14.28□□□□□ -0.12
TRA2B-214ENST00000487615 HIP1O00291 1037 aa14.28□□□□□ -0.12
TRA2B-214ENST00000487615 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
TRA2B-214ENST00000487615 CHMP4CQ96CF2 233 aa14.28□□□□□ -0.12
TRA2B-214ENST00000487615 KIF1BPQ96EK5 621 aa14.28□□□□□ -0.12
TRA2B-214ENST00000487615 NEUROD6Q96NK8 337 aa14.28□□□□□ -0.12
TRA2B-214ENST00000487615 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
TRA2B-214ENST00000487615 MYL6BP14649 208 aa14.27□□□□□ -0.12
TRA2B-214ENST00000487615 ANKRD44Q8N8A2 993 aa14.27□□□□□ -0.12
TRA2B-214ENST00000487615 NRDCO43847 1150 aa14.27□□□□□ -0.13
TRA2B-214ENST00000487615 KCNA6P17658 529 aa14.27□□□□□ -0.13
TRA2B-214ENST00000487615 SYTL4Q96C24 671 aaPredicted RBP14.27□□□□□ -0.13
TRA2B-214ENST00000487615 DNAAF4Q8WXU2 420 aa14.27□□□□□ -0.13
TRA2B-214ENST00000487615 PRDM11Q9NQV5 511 aa14.27□□□□□ -0.13
TRA2B-214ENST00000487615 INO80Q9ULG1 1556 aaPredicted RBP14.27□□□□□ -0.13
TRA2B-214ENST00000487615 RAB11FIP3O75154 756 aa14.26□□□□□ -0.13
TRA2B-214ENST00000487615 KRT24Q2M2I5 525 aa14.26□□□□□ -0.13
TRA2B-214ENST00000487615 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.26□□□□□ -0.13
TRA2B-214ENST00000487615 VPS37CA5D8V6 355 aaPredicted RBP14.26□□□□□ -0.13
TRA2B-214ENST00000487615 TOM1L2Q6ZVM7 507 aa14.26□□□□□ -0.13
TRA2B-214ENST00000487615 EYA1Q99502 592 aa14.26□□□□□ -0.13
TRA2B-214ENST00000487615 DBF4Q9UBU7 674 aaPredicted RBP14.26□□□□□ -0.13
TRA2B-214ENST00000487615 PIK3R4Q99570 1358 aa14.26□□□□□ -0.13
TRA2B-214ENST00000487615 ABCA6Q8N139 1617 aa14.26□□□□□ -0.13
TRA2B-214ENST00000487615 ADGRB3O60242 1522 aa14.25□□□□□ -0.13
TRA2B-214ENST00000487615 LMTK2Q8IWU2 1503 aa14.25□□□□□ -0.13
TRA2B-214ENST00000487615 MAP4K4O95819 1239 aaPredicted RBP14.25□□□□□ -0.13
TRA2B-214ENST00000487615 PSMA5P28066 241 aa14.25□□□□□ -0.13
TRA2B-214ENST00000487615 TTC22Q5TAA0 569 aa14.25□□□□□ -0.13
TRA2B-214ENST00000487615 ZBTB7BO15156 539 aaPredicted RBP14.25□□□□□ -0.13
TRA2B-214ENST00000487615 NUTM1Q86Y26 1132 aa14.25□□□□□ -0.13
TRA2B-214ENST00000487615 PLEKHF1Q96S99 279 aa14.25□□□□□ -0.13
TRA2B-214ENST00000487615 SIL1Q9H173 461 aa14.25□□□□□ -0.13
TRA2B-214ENST00000487615 BRPF3Q9ULD4 1205 aa14.25□□□□□ -0.13
TRA2B-214ENST00000487615 PLEKHG3A1L390 1219 aa14.25□□□□□ -0.13
TRA2B-214ENST00000487615 SEC24BO95487 1268 aa14.25□□□□□ -0.13
TRA2B-214ENST00000487615 KRT28Q7Z3Y7 464 aa14.24□□□□□ -0.13
TRA2B-214ENST00000487615 CEP152O94986 1710 aa14.24□□□□□ -0.13
TRA2B-214ENST00000487615 GTF2E1P29083 439 aaPredicted RBP14.24□□□□□ -0.13
TRA2B-214ENST00000487615 CHAF1AQ13111 956 aaPredicted RBP14.24□□□□□ -0.13
TRA2B-214ENST00000487615 AACSQ86V21 672 aa14.24□□□□□ -0.13
TRA2B-214ENST00000487615 STRN4Q9NRL3 753 aa14.24□□□□□ -0.13
TRA2B-214ENST00000487615 METP08581 1390 aa14.23□□□□□ -0.13
TRA2B-214ENST00000487615 ATP7BP35670 1465 aa14.23□□□□□ -0.13
TRA2B-214ENST00000487615 MBD3O95983 291 aa14.23□□□□□ -0.13
TRA2B-214ENST00000487615 CAVIN1Q6NZI2 390 aaKnown RBP14.23□□□□□ -0.13
TRA2B-214ENST00000487615 DCTPP1Q9H773 170 aa14.23□□□□□ -0.13
TRA2B-214ENST00000487615 GLRX3O76003 335 aaKnown RBP14.22□□□□□ -0.13
TRA2B-214ENST00000487615 LTKP29376 864 aa14.22□□□□□ -0.13
TRA2B-214ENST00000487615 ISY1Q9ULR0 285 aaKnown RBP14.22□□□□□ -0.13
TRA2B-214ENST00000487615 TSPOAP1O95153 1857 aa14.22□□□□□ -0.13
TRA2B-214ENST00000487615 SBNO1A3KN83 1393 aa14.22□□□□□ -0.13
TRA2B-214ENST00000487615 PRPF40AO75400 957 aaKnown RBP14.22□□□□□ -0.13
TRA2B-214ENST00000487615 TOMM22Q9NS69 142 aa14.22□□□□□ -0.13
TRA2B-214ENST00000487615 LARP1Q6PKG0 1096 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms