RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 PPP2R1AP30153 589 aa15.79■□□□□ 0.12
CLIP2-207ENST00000487447 IL13P35225 146 aa15.79■□□□□ 0.12
CLIP2-207ENST00000487447 RGPD3A6NKT7 1758 aaPredicted RBP15.78■□□□□ 0.12
CLIP2-207ENST00000487447 RGPD4Q7Z3J3 1758 aa15.78■□□□□ 0.12
CLIP2-207ENST00000487447 PDE3BQ13370 1112 aa15.78■□□□□ 0.12
CLIP2-207ENST00000487447 USHBP1Q8N6Y0 703 aa15.78■□□□□ 0.12
CLIP2-207ENST00000487447 EXOC5O00471 708 aa15.77■□□□□ 0.12
CLIP2-207ENST00000487447 MARCH10Q8NA82 808 aaPredicted RBP15.77■□□□□ 0.12
CLIP2-207ENST00000487447 RALBP1Q15311 655 aa15.76■□□□□ 0.11
CLIP2-207ENST00000487447 FAM196AQ6ZSG2 479 aa15.76■□□□□ 0.11
CLIP2-207ENST00000487447 DOT1LQ8TEK3 1739 aa15.76■□□□□ 0.11
CLIP2-207ENST00000487447 RAPGEF4Q8WZA2 1011 aa15.75■□□□□ 0.11
CLIP2-207ENST00000487447 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
CLIP2-207ENST00000487447 DIAPH1O60610 1272 aaKnown RBP15.74■□□□□ 0.11
CLIP2-207ENST00000487447 TRIM37O94972 964 aa15.74■□□□□ 0.11
CLIP2-207ENST00000487447 TATP17735 454 aaPredicted RBP15.74■□□□□ 0.11
CLIP2-207ENST00000487447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.74■□□□□ 0.11
CLIP2-207ENST00000487447 R3HDM1Q15032 1099 aaKnown RBP15.73■□□□□ 0.11
CLIP2-207ENST00000487447 RREB1Q92766 1687 aa15.73■□□□□ 0.11
CLIP2-207ENST00000487447 CNGB1Q14028 1251 aaPredicted RBP15.72■□□□□ 0.11
CLIP2-207ENST00000487447 EZH2Q15910 746 aaKnown RBP15.72■□□□□ 0.11
CLIP2-207ENST00000487447 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
CLIP2-207ENST00000487447 ADAMTS7Q9UKP4 1686 aa15.71■□□□□ 0.11
CLIP2-207ENST00000487447 CFAP53Q96M91 514 aa15.71■□□□□ 0.11
CLIP2-207ENST00000487447 PRKRIP1Q9H875 184 aaPredicted RBP15.71■□□□□ 0.11
CLIP2-207ENST00000487447 BTAF1O14981 1849 aa15.71■□□□□ 0.1
CLIP2-207ENST00000487447 MYBBP1AQ9BQG0 1328 aaKnown RBP15.7■□□□□ 0.1
CLIP2-207ENST00000487447 PCDH11XQ9BZA7 1347 aa15.7■□□□□ 0.1
CLIP2-207ENST00000487447 PCDH11YQ9BZA8 1340 aa15.7■□□□□ 0.1
CLIP2-207ENST00000487447 APBA3O96018 575 aa15.7■□□□□ 0.1
CLIP2-207ENST00000487447 AEBP1Q8IUX7 1158 aa15.7■□□□□ 0.1
CLIP2-207ENST00000487447 ITGB4P16144 1822 aa15.69■□□□□ 0.1
CLIP2-207ENST00000487447 SULT6B1Q6IMI4 303 aa15.69■□□□□ 0.1
CLIP2-207ENST00000487447 CAMKK2Q96RR4 588 aa15.69■□□□□ 0.1
CLIP2-207ENST00000487447 CYP27B1O15528 508 aa15.68■□□□□ 0.1
CLIP2-207ENST00000487447 NKX1-1Q15270 411 aaPredicted RBP15.68■□□□□ 0.1
CLIP2-207ENST00000487447 VIRMAQ69YN4 1812 aaKnown RBP15.68■□□□□ 0.1
CLIP2-207ENST00000487447 BCL11BQ9C0K0 894 aaPredicted RBP15.67■□□□□ 0.1
CLIP2-207ENST00000487447 SPG7Q9UQ90 795 aa15.67■□□□□ 0.1
CLIP2-207ENST00000487447 SCN11AQ9UI33 1791 aa15.67■□□□□ 0.1
CLIP2-207ENST00000487447 LY75O60449 1722 aa15.66■□□□□ 0.1
CLIP2-207ENST00000487447 NUP188Q5SRE5 1749 aa15.66■□□□□ 0.1
CLIP2-207ENST00000487447 AMOTQ4VCS5 1084 aa15.66■□□□□ 0.1
CLIP2-207ENST00000487447 DDX54Q8TDD1 881 aaKnown RBP15.66■□□□□ 0.1
CLIP2-207ENST00000487447 PHKG2P15735 406 aa15.65■□□□□ 0.1
CLIP2-207ENST00000487447 PLEKHO1Q53GL0 409 aaPredicted RBP15.64■□□□□ 0.09
CLIP2-207ENST00000487447 NUDCQ9Y266 331 aa15.64■□□□□ 0.09
CLIP2-207ENST00000487447 HMOX1P09601 288 aa15.63■□□□□ 0.09
CLIP2-207ENST00000487447 PTF1AQ7RTS3 328 aa15.63■□□□□ 0.09
CLIP2-207ENST00000487447 IFNL2Q8IZJ0 200 aa15.63■□□□□ 0.09
CLIP2-207ENST00000487447 RSPH6AQ9H0K4 717 aa15.63■□□□□ 0.09
CLIP2-207ENST00000487447 KDM6AO15550 1401 aaPredicted RBP15.62■□□□□ 0.09
CLIP2-207ENST00000487447 LRP5O75197 1615 aa15.62■□□□□ 0.09
CLIP2-207ENST00000487447 U2SURPO15042 1029 aaKnown RBP15.62■□□□□ 0.09
CLIP2-207ENST00000487447 PLSCR1O15162 318 aa15.62■□□□□ 0.09
CLIP2-207ENST00000487447 MRC1P22897 1456 aa15.62■□□□□ 0.09
CLIP2-207ENST00000487447 KCNQ2O43526 872 aa15.61■□□□□ 0.09
CLIP2-207ENST00000487447 PAPPAQ13219 1627 aa15.61■□□□□ 0.09
CLIP2-207ENST00000487447 SIPA1L3O60292 1781 aaPredicted RBP15.6■□□□□ 0.09
CLIP2-207ENST00000487447 FCHSD2O94868 740 aa15.6■□□□□ 0.09
CLIP2-207ENST00000487447 ZNF831Q5JPB2 1677 aa15.6■□□□□ 0.09
CLIP2-207ENST00000487447 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
CLIP2-207ENST00000487447 ZNF530Q6P9A1 599 aaPredicted RBP15.59■□□□□ 0.09
CLIP2-207ENST00000487447 ACSBG1Q96GR2 724 aa15.59■□□□□ 0.09
CLIP2-207ENST00000487447 DLG5Q8TDM6 1919 aa15.58■□□□□ 0.09
CLIP2-207ENST00000487447 CICQ96RK0 1608 aaPredicted RBP15.58■□□□□ 0.09
CLIP2-207ENST00000487447 U2AF1L5P0DN76 240 aaPredicted RBP15.58■□□□□ 0.08
CLIP2-207ENST00000487447 U2AF1Q01081 240 aaKnown RBP eCLIP15.58■□□□□ 0.08
CLIP2-207ENST00000487447 MTHFSDQ2M296 383 aaKnown RBP15.58■□□□□ 0.08
CLIP2-207ENST00000487447 AKAP4Q5JQC9 854 aa15.58■□□□□ 0.08
CLIP2-207ENST00000487447 NBPF14Q5TI25 921 aa15.58■□□□□ 0.08
CLIP2-207ENST00000487447 DCAF5Q96JK2 942 aa15.58■□□□□ 0.08
CLIP2-207ENST00000487447 PRKAR2BP31323 418 aa15.57■□□□□ 0.08
CLIP2-207ENST00000487447 PRIM1P49642 420 aaKnown RBP15.57■□□□□ 0.08
CLIP2-207ENST00000487447 PHACTR3Q96KR7 559 aa15.56■□□□□ 0.08
CLIP2-207ENST00000487447 PLEKHF1Q96S99 279 aa15.56■□□□□ 0.08
CLIP2-207ENST00000487447 TAF1LQ8IZX4 1826 aa15.55■□□□□ 0.08
CLIP2-207ENST00000487447 MAP3K5Q99683 1374 aa15.55■□□□□ 0.08
CLIP2-207ENST00000487447 ERVV-2B6SEH9 535 aa15.55■□□□□ 0.08
CLIP2-207ENST00000487447 ANP32CO43423 234 aa15.55■□□□□ 0.08
CLIP2-207ENST00000487447 C1orf141Q5JVX7 400 aa15.55■□□□□ 0.08
CLIP2-207ENST00000487447 GAS2L2Q8NHY3 880 aa15.55■□□□□ 0.08
CLIP2-207ENST00000487447 UBR2Q8IWV8 1755 aa15.54■□□□□ 0.08
CLIP2-207ENST00000487447 QSER1Q2KHR3 1735 aa15.54■□□□□ 0.08
CLIP2-207ENST00000487447 PROM2Q8N271 834 aa15.54■□□□□ 0.08
CLIP2-207ENST00000487447 C5P01031 1676 aa15.54■□□□□ 0.08
CLIP2-207ENST00000487447 KAT6BQ8WYB5 2073 aa15.53■□□□□ 0.08
CLIP2-207ENST00000487447 CEMIPQ8WUJ3 1361 aa15.53■□□□□ 0.08
CLIP2-207ENST00000487447 PIGBQ92521 554 aa15.52■□□□□ 0.08
CLIP2-207ENST00000487447 PNNQ9H307 717 aaKnown RBP15.52■□□□□ 0.08
CLIP2-207ENST00000487447 COL5A3P25940 1745 aaPredicted RBP15.51■□□□□ 0.07
CLIP2-207ENST00000487447 TXNRD1Q16881 649 aa15.51■□□□□ 0.07
CLIP2-207ENST00000487447 MPRIPQ6WCQ1 1025 aa15.51■□□□□ 0.07
CLIP2-207ENST00000487447 SYTL4Q96C24 671 aaPredicted RBP15.51■□□□□ 0.07
CLIP2-207ENST00000487447 PALLDQ8WX93 1383 aa15.5■□□□□ 0.07
CLIP2-207ENST00000487447 GNAT3A8MTJ3 354 aa15.5■□□□□ 0.07
CLIP2-207ENST00000487447 RNMTO43148 476 aaKnown RBP15.5■□□□□ 0.07
CLIP2-207ENST00000487447 CCDC184Q52MB2 194 aa15.5■□□□□ 0.07
CLIP2-207ENST00000487447 SLC27A3Q5K4L6 730 aa15.5■□□□□ 0.07
CLIP2-207ENST00000487447 SPON1Q9HCB6 807 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms