RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 FOXO3O43524 673 aa15.39■□□□□ 0.05
PTCD2-204ENST00000486995 MTHFSDQ2M296 383 aaKnown RBP15.39■□□□□ 0.05
PTCD2-204ENST00000486995 SLIT1O75093 1534 aa15.39■□□□□ 0.05
PTCD2-204ENST00000486995 ANKRD44Q8N8A2 993 aa15.38■□□□□ 0.05
PTCD2-204ENST00000486995 PLEKHM2Q8IWE5 1019 aa15.38■□□□□ 0.05
PTCD2-204ENST00000486995 MIS18AQ9NYP9 233 aa15.38■□□□□ 0.05
PTCD2-204ENST00000486995 PTPRCP08575 1304 aa15.38■□□□□ 0.05
PTCD2-204ENST00000486995 SBNO1A3KN83 1393 aa15.38■□□□□ 0.05
PTCD2-204ENST00000486995 ATP10DQ9P241 1426 aa15.38■□□□□ 0.05
PTCD2-204ENST00000486995 FLT4P35916 1363 aa15.37■□□□□ 0.05
PTCD2-204ENST00000486995 NCOA3Q9Y6Q9 1424 aa15.37■□□□□ 0.05
PTCD2-204ENST00000486995 GSPT1P15170 499 aaKnown RBP15.37■□□□□ 0.05
PTCD2-204ENST00000486995 MCM4P33991 863 aa15.37■□□□□ 0.05
PTCD2-204ENST00000486995 DDIT3P35638 169 aa15.37■□□□□ 0.05
PTCD2-204ENST00000486995 RPAP2Q8IXW5 612 aaPredicted RBP15.37■□□□□ 0.05
PTCD2-204ENST00000486995 NGDNQ8NEJ9 315 aaKnown RBP15.37■□□□□ 0.05
PTCD2-204ENST00000486995 KDRP35968 1356 aa15.37■□□□□ 0.05
PTCD2-204ENST00000486995 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
PTCD2-204ENST00000486995 CEP85Q6P2H3 762 aa15.36■□□□□ 0.05
PTCD2-204ENST00000486995 EYA1Q99502 592 aa15.36■□□□□ 0.05
PTCD2-204ENST00000486995 RTL1A6NKG5 1358 aa15.35■□□□□ 0.05
PTCD2-204ENST00000486995 MSH6P52701 1360 aa15.35■□□□□ 0.05
PTCD2-204ENST00000486995 IGSF1Q8N6C5 1336 aa15.35■□□□□ 0.05
PTCD2-204ENST00000486995 C16orf71Q8IYS4 520 aaPredicted RBP15.35■□□□□ 0.05
PTCD2-204ENST00000486995 CDC45O75419 566 aa15.34■□□□□ 0.05
PTCD2-204ENST00000486995 AMPHP49418 695 aa15.34■□□□□ 0.05
PTCD2-204ENST00000486995 PLPPR3Q6T4P5 718 aa15.34■□□□□ 0.05
PTCD2-204ENST00000486995 RTF1Q92541 710 aaKnown RBP15.34■□□□□ 0.05
PTCD2-204ENST00000486995 MEIS3Q99687 375 aa15.34■□□□□ 0.05
PTCD2-204ENST00000486995 DIP2AQ14689 1571 aa15.34■□□□□ 0.05
PTCD2-204ENST00000486995 TSPYL4Q9UJ04 414 aa15.34■□□□□ 0.05
PTCD2-204ENST00000486995 THEMISQ8N1K5 641 aaPredicted RBP15.33■□□□□ 0.05
PTCD2-204ENST00000486995 CEP170BQ9Y4F5 1589 aaPredicted RBP15.33■□□□□ 0.04
PTCD2-204ENST00000486995 TTC22Q5TAA0 569 aa15.33■□□□□ 0.04
PTCD2-204ENST00000486995 RTN4Q9NQC3 1192 aaKnown RBP15.33■□□□□ 0.04
PTCD2-204ENST00000486995 G2E3Q7L622 706 aa15.32■□□□□ 0.04
PTCD2-204ENST00000486995 CD2BP2O95400 341 aaKnown RBP15.32■□□□□ 0.04
PTCD2-204ENST00000486995 GAS2L2Q8NHY3 880 aa15.32■□□□□ 0.04
PTCD2-204ENST00000486995 FMN2Q9NZ56 1722 aa15.32■□□□□ 0.04
PTCD2-204ENST00000486995 RIMS1Q86UR5 1692 aaKnown RBP15.32■□□□□ 0.04
PTCD2-204ENST00000486995 RGPD8O14715 1765 aaPredicted RBP15.32■□□□□ 0.04
PTCD2-204ENST00000486995 NLRP6P59044 892 aa15.31■□□□□ 0.04
PTCD2-204ENST00000486995 OTUD7AQ8TE49 926 aaPredicted RBP15.31■□□□□ 0.04
PTCD2-204ENST00000486995 PIK3C2AO00443 1686 aa15.31■□□□□ 0.04
PTCD2-204ENST00000486995 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
PTCD2-204ENST00000486995 HSP90AB1P08238 724 aaKnown RBP15.3■□□□□ 0.04
PTCD2-204ENST00000486995 F6X3S4 739 aa15.3■□□□□ 0.04
PTCD2-204ENST00000486995 HTATSF1O43719 755 aaKnown RBP15.3■□□□□ 0.04
PTCD2-204ENST00000486995 SMARCA5O60264 1052 aaPredicted RBP15.3■□□□□ 0.04
PTCD2-204ENST00000486995 KCNA6P17658 529 aa15.3■□□□□ 0.04
PTCD2-204ENST00000486995 HOXC9P31274 260 aa15.29■□□□□ 0.04
PTCD2-204ENST00000486995 CIZ1Q9ULV3 898 aaPredicted RBP15.29■□□□□ 0.04
PTCD2-204ENST00000486995 ANKARQ7Z5J8 1434 aa15.28■□□□□ 0.04
PTCD2-204ENST00000486995 K7ELQ4 463 aaPredicted RBP15.28■□□□□ 0.04
PTCD2-204ENST00000486995 CCT4P50991 539 aaKnown RBP15.28■□□□□ 0.04
PTCD2-204ENST00000486995 NUTM2GQ5VZR2 741 aa15.28■□□□□ 0.04
PTCD2-204ENST00000486995 SLC4A10Q6U841 1118 aa15.28■□□□□ 0.04
PTCD2-204ENST00000486995 XRN1Q8IZH2 1706 aaKnown RBP15.28■□□□□ 0.04
PTCD2-204ENST00000486995 APBB1O00213 710 aa15.28■□□□□ 0.04
PTCD2-204ENST00000486995 TRAK2O60296 914 aa15.28■□□□□ 0.04
PTCD2-204ENST00000486995 GNAT3A8MTJ3 354 aa15.27■□□□□ 0.03
PTCD2-204ENST00000486995 EIF5BO60841 1220 aaKnown RBP15.27■□□□□ 0.03
PTCD2-204ENST00000486995 SDSP20132 328 aa15.27■□□□□ 0.03
PTCD2-204ENST00000486995 TNPO1Q92973 898 aaKnown RBP15.27■□□□□ 0.03
PTCD2-204ENST00000486995 USP26Q9BXU7 913 aa15.26■□□□□ 0.03
PTCD2-204ENST00000486995 HMMRO75330 724 aa15.26■□□□□ 0.03
PTCD2-204ENST00000486995 RAB3GAP1Q15042 981 aa15.26■□□□□ 0.03
PTCD2-204ENST00000486995 L1TD1Q5T7N2 865 aaKnown RBP15.26■□□□□ 0.03
PTCD2-204ENST00000486995 IL17REQ8NFR9 667 aa15.26■□□□□ 0.03
PTCD2-204ENST00000486995 NWD1Q149M9 1564 aa15.26■□□□□ 0.03
PTCD2-204ENST00000486995 DDX11L8A8MPP1 907 aa15.25■□□□□ 0.03
PTCD2-204ENST00000486995 ABTB2Q8N961 1025 aa15.25■□□□□ 0.03
PTCD2-204ENST00000486995 STK31Q9BXU1 1019 aa15.25■□□□□ 0.03
PTCD2-204ENST00000486995 FSD2A1L4K1 749 aa15.25■□□□□ 0.03
PTCD2-204ENST00000486995 GZF1Q9H116 711 aaPredicted RBP15.25■□□□□ 0.03
PTCD2-204ENST00000486995 FER1L4A9Z1Z3 1794 aa15.24■□□□□ 0.03
PTCD2-204ENST00000486995 FLIIQ13045 1269 aa15.24■□□□□ 0.03
PTCD2-204ENST00000486995 CCDC30Q5VVM6 783 aa15.24■□□□□ 0.03
PTCD2-204ENST00000486995 MARF1Q9Y4F3 1742 aaKnown RBP15.24■□□□□ 0.03
PTCD2-204ENST00000486995 GNAI2P04899 355 aa15.24■□□□□ 0.03
PTCD2-204ENST00000486995 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
PTCD2-204ENST00000486995 LRRC37A3O60309 1634 aa15.24■□□□□ 0.03
PTCD2-204ENST00000486995 HSP90AA1P07900 732 aaKnown RBP15.23■□□□□ 0.03
PTCD2-204ENST00000486995 RABEP1Q15276 862 aa15.23■□□□□ 0.03
PTCD2-204ENST00000486995 LTV1Q96GA3 475 aaPredicted RBP15.23■□□□□ 0.03
PTCD2-204ENST00000486995 OSBPL3Q9H4L5 887 aa15.23■□□□□ 0.03
PTCD2-204ENST00000486995 MAP3K5Q99683 1374 aa15.22■□□□□ 0.03
PTCD2-204ENST00000486995 GOLGA6L3A6NEY3 463 aa15.22■□□□□ 0.03
PTCD2-204ENST00000486995 FKBP5Q13451 457 aaPredicted RBP15.22■□□□□ 0.03
PTCD2-204ENST00000486995 TAF7Q15545 349 aaPredicted RBP15.22■□□□□ 0.03
PTCD2-204ENST00000486995 NECTIN2Q92692 538 aa15.22■□□□□ 0.03
PTCD2-204ENST00000486995 BABAM1Q9NWV8 329 aa15.21■□□□□ 0.03
PTCD2-204ENST00000486995 USP54Q70EL1 1684 aa15.21■□□□□ 0.03
PTCD2-204ENST00000486995 XRCC6P12956 609 aaKnown RBP eCLIP15.21■□□□□ 0.03
PTCD2-204ENST00000486995 PDE1AP54750 535 aa15.21■□□□□ 0.03
PTCD2-204ENST00000486995 CASC1Q6TDU7 716 aa15.21■□□□□ 0.03
PTCD2-204ENST00000486995 SOS1Q07889 1333 aaPredicted RBP15.2■□□□□ 0.02
PTCD2-204ENST00000486995 GBP4Q96PP9 640 aa15.2■□□□□ 0.02
PTCD2-204ENST00000486995 EXOC6BQ9Y2D4 811 aa15.2■□□□□ 0.02
PTCD2-204ENST00000486995 GNAI3P08754 354 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms