RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 SIAH2O43255 324 aa9.84□□□□□ -0.83
SMARCAL1-212ENST00000486983 MDM2Q00987 491 aaPredicted RBP9.84□□□□□ -0.83
SMARCAL1-212ENST00000486983 MAP2K5Q13163 448 aa9.84□□□□□ -0.83
SMARCAL1-212ENST00000486983 MAGI2Q86UL8 1455 aa9.84□□□□□ -0.83
SMARCAL1-212ENST00000486983 PLCH2O75038 1416 aa9.83□□□□□ -0.84
SMARCAL1-212ENST00000486983 SYMPKQ92797 1274 aaKnown RBP9.83□□□□□ -0.84
SMARCAL1-212ENST00000486983 RALGAPBQ86X10 1494 aa9.83□□□□□ -0.84
SMARCAL1-212ENST00000486983 WASHC2AQ641Q2 1341 aa9.82□□□□□ -0.84
SMARCAL1-212ENST00000486983 ERBINQ96RT1 1412 aa9.82□□□□□ -0.84
SMARCAL1-212ENST00000486983 ABCC1P33527 1531 aa9.82□□□□□ -0.84
SMARCAL1-212ENST00000486983 DUOX2Q9NRD8 1548 aa9.82□□□□□ -0.84
SMARCAL1-212ENST00000486983 FAM135AQ9P2D6 1515 aa9.82□□□□□ -0.84
SMARCAL1-212ENST00000486983 VEGFBP49765 207 aa9.82□□□□□ -0.84
SMARCAL1-212ENST00000486983 PTCRAQ6ISU1 281 aaPredicted RBP9.82□□□□□ -0.84
SMARCAL1-212ENST00000486983 EHBP1Q8NDI1 1231 aa9.82□□□□□ -0.84
SMARCAL1-212ENST00000486983 NUP155O75694 1391 aa9.82□□□□□ -0.84
SMARCAL1-212ENST00000486983 CCDC7Q96M83 1385 aa9.82□□□□□ -0.84
SMARCAL1-212ENST00000486983 ARID4BQ4LE39 1312 aaPredicted RBP9.82□□□□□ -0.84
SMARCAL1-212ENST00000486983 FAM181BA6NEQ2 426 aa9.81□□□□□ -0.84
SMARCAL1-212ENST00000486983 CAPN5O15484 640 aaPredicted RBP9.81□□□□□ -0.84
SMARCAL1-212ENST00000486983 NUDT12Q9BQG2 462 aa9.81□□□□□ -0.84
SMARCAL1-212ENST00000486983 IQGAP3Q86VI3 1631 aa9.81□□□□□ -0.84
SMARCAL1-212ENST00000486983 ATP10AO60312 1499 aa9.8□□□□□ -0.84
SMARCAL1-212ENST00000486983 NBPF8Q3BBV2 869 aa9.8□□□□□ -0.84
SMARCAL1-212ENST00000486983 ZSCAN1Q8NBB4 408 aa9.8□□□□□ -0.84
SMARCAL1-212ENST00000486983 IRF7Q92985 503 aa9.8□□□□□ -0.84
SMARCAL1-212ENST00000486983 HIRIP3Q9BW71 556 aaPredicted RBP9.8□□□□□ -0.84
SMARCAL1-212ENST00000486983 KDM5CP41229 1560 aa9.8□□□□□ -0.84
SMARCAL1-212ENST00000486983 H3BM21 787 aa9.79□□□□□ -0.84
SMARCAL1-212ENST00000486983 HNRNPMP52272 730 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMARCAL1-212ENST00000486983 NPAS3Q8IXF0 933 aa9.79□□□□□ -0.84
SMARCAL1-212ENST00000486983 WASF2Q9Y6W5 498 aa9.79□□□□□ -0.84
SMARCAL1-212ENST00000486983 ERBB4Q15303 1308 aa9.79□□□□□ -0.84
SMARCAL1-212ENST00000486983 IRF6O14896 467 aa9.78□□□□□ -0.84
SMARCAL1-212ENST00000486983 RTEL1-TNFRSF6BF6WH68 1400 aa9.78□□□□□ -0.84
SMARCAL1-212ENST00000486983 SH3BP2P78314 561 aa9.77□□□□□ -0.85
SMARCAL1-212ENST00000486983 RETREG3Q86VR2 466 aa9.77□□□□□ -0.85
SMARCAL1-212ENST00000486983 USP47Q96K76 1375 aa9.76□□□□□ -0.85
SMARCAL1-212ENST00000486983 LAMC1P11047 1609 aa9.76□□□□□ -0.85
SMARCAL1-212ENST00000486983 WDR7Q9Y4E6 1490 aa9.76□□□□□ -0.85
SMARCAL1-212ENST00000486983 ROCK2O75116 1388 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-212ENST00000486983 ABCA9Q8IUA7 1624 aa9.75□□□□□ -0.85
SMARCAL1-212ENST00000486983 EFCAB2Q5VUJ9 269 aa9.75□□□□□ -0.85
SMARCAL1-212ENST00000486983 TLL2Q9Y6L7 1015 aa9.75□□□□□ -0.85
SMARCAL1-212ENST00000486983 ZFYVE16Q7Z3T8 1539 aa9.75□□□□□ -0.85
SMARCAL1-212ENST00000486983 KIF7Q2M1P5 1343 aa9.75□□□□□ -0.85
SMARCAL1-212ENST00000486983 CCDC144AA2RUR9 1427 aa9.74□□□□□ -0.85
SMARCAL1-212ENST00000486983 CCDC102AQ96A19 550 aa9.74□□□□□ -0.85
SMARCAL1-212ENST00000486983 ZFP42Q96MM3 310 aa9.74□□□□□ -0.85
SMARCAL1-212ENST00000486983 FAM217BQ9NTX9 383 aaPredicted RBP9.74□□□□□ -0.85
SMARCAL1-212ENST00000486983 SUPT16HQ9Y5B9 1047 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-212ENST00000486983 EIF2AK4Q9P2K8 1649 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-212ENST00000486983 INO80Q9ULG1 1556 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-212ENST00000486983 CCNYL3P0C7X3 344 aa9.73□□□□□ -0.85
SMARCAL1-212ENST00000486983 GPCPD1Q9NPB8 672 aa9.73□□□□□ -0.85
SMARCAL1-212ENST00000486983 PCDHGC3Q9UN70 934 aa9.73□□□□□ -0.85
SMARCAL1-212ENST00000486983 DEPDC5O75140 1603 aa9.73□□□□□ -0.85
SMARCAL1-212ENST00000486983 GPRASP1Q5JY77 1395 aa9.73□□□□□ -0.85
SMARCAL1-212ENST00000486983 PLA2R1Q13018 1463 aa9.72□□□□□ -0.85
SMARCAL1-212ENST00000486983 PRAG1Q86YV5 1406 aa9.72□□□□□ -0.85
SMARCAL1-212ENST00000486983 TRPM1Q7Z4N2 1603 aa9.71□□□□□ -0.85
SMARCAL1-212ENST00000486983 LOC100996750A0A140TA64 210 aa9.71□□□□□ -0.86
SMARCAL1-212ENST00000486983 MS4A1P11836 297 aa9.71□□□□□ -0.86
SMARCAL1-212ENST00000486983 FAM69CQ0P6D2 419 aa9.71□□□□□ -0.86
SMARCAL1-212ENST00000486983 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
SMARCAL1-212ENST00000486983 KRTAP4-6Q9BYQ5 205 aa9.71□□□□□ -0.86
SMARCAL1-212ENST00000486983 UNC93B1Q9H1C4 597 aa9.71□□□□□ -0.86
SMARCAL1-212ENST00000486983 PRKRIP1Q9H875 184 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-212ENST00000486983 MINK1Q8N4C8 1332 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-212ENST00000486983 NEURL4Q96JN8 1562 aa9.71□□□□□ -0.86
SMARCAL1-212ENST00000486983 BCORL1Q5H9F3 1711 aa9.7□□□□□ -0.86
SMARCAL1-212ENST00000486983 FDX1P10109 184 aa9.7□□□□□ -0.86
SMARCAL1-212ENST00000486983 CLCN1P35523 988 aa9.7□□□□□ -0.86
SMARCAL1-212ENST00000486983 NUTM1Q86Y26 1132 aa9.7□□□□□ -0.86
SMARCAL1-212ENST00000486983 DHX29Q7Z478 1369 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-212ENST00000486983 TRAPPC8Q9Y2L5 1435 aa9.7□□□□□ -0.86
SMARCAL1-212ENST00000486983 TRPM2O94759 1503 aa9.7□□□□□ -0.86
SMARCAL1-212ENST00000486983 VWDEQ8N2E2 1590 aa9.7□□□□□ -0.86
SMARCAL1-212ENST00000486983 C6orf229H3BNL8 230 aa9.69□□□□□ -0.86
SMARCAL1-212ENST00000486983 A2MP01023 1474 aa9.69□□□□□ -0.86
SMARCAL1-212ENST00000486983 NNTQ13423 1086 aa9.69□□□□□ -0.86
SMARCAL1-212ENST00000486983 KTN1Q86UP2 1357 aaKnown RBP9.69□□□□□ -0.86
SMARCAL1-212ENST00000486983 KIF13AQ9H1H9 1805 aa9.69□□□□□ -0.86
SMARCAL1-212ENST00000486983 RNF17Q9BXT8 1623 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-212ENST00000486983 PRDM15P57071 1507 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-212ENST00000486983 ATP7AQ04656 1500 aa9.68□□□□□ -0.86
SMARCAL1-212ENST00000486983 FANCAO15360 1455 aa9.68□□□□□ -0.86
SMARCAL1-212ENST00000486983 PTPRNQ16849 979 aa9.68□□□□□ -0.86
SMARCAL1-212ENST00000486983 BAP1Q92560 729 aa9.68□□□□□ -0.86
SMARCAL1-212ENST00000486983 E9PCH4 1651 aa9.67□□□□□ -0.86
SMARCAL1-212ENST00000486983 CFAP74Q9C0B2 1584 aa9.67□□□□□ -0.86
SMARCAL1-212ENST00000486983 PTPRTO14522 1441 aa9.67□□□□□ -0.86
SMARCAL1-212ENST00000486983 SPAG9O60271 1321 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-212ENST00000486983 PLCB2Q00722 1185 aa9.67□□□□□ -0.86
SMARCAL1-212ENST00000486983 MRPL14Q6P1L8 145 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-212ENST00000486983 CARD11Q9BXL7 1154 aa9.67□□□□□ -0.86
SMARCAL1-212ENST00000486983 TET3O43151 1660 aa9.67□□□□□ -0.86
SMARCAL1-212ENST00000486983 SOBPA7XYQ1 873 aa9.66□□□□□ -0.86
SMARCAL1-212ENST00000486983 TIMP2P16035 220 aa9.66□□□□□ -0.86
SMARCAL1-212ENST00000486983 ZNF511Q8NB15 262 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms