RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 PDE4AP27815 886 aa12.34□□□□□ -0.43
POLR1A-208ENST00000486964 DEKP35659 375 aaKnown RBP12.34□□□□□ -0.43
POLR1A-208ENST00000486964 ZC3H6P61129 1189 aaKnown RBP12.34□□□□□ -0.43
POLR1A-208ENST00000486964 CALD1Q05682 793 aaKnown RBP12.34□□□□□ -0.43
POLR1A-208ENST00000486964 CENPQQ7L2Z9 268 aaPredicted RBP12.34□□□□□ -0.43
POLR1A-208ENST00000486964 ANKRD24Q8TF21 1146 aa12.34□□□□□ -0.43
POLR1A-208ENST00000486964 ABCC6O95255 1503 aa12.34□□□□□ -0.43
POLR1A-208ENST00000486964 LTV1Q96GA3 475 aaPredicted RBP12.33□□□□□ -0.44
POLR1A-208ENST00000486964 IFT57Q9NWB7 429 aa12.33□□□□□ -0.44
POLR1A-208ENST00000486964 ERBB3P21860 1342 aa12.32□□□□□ -0.44
POLR1A-208ENST00000486964 COL18A1P39060 1754 aa12.32□□□□□ -0.44
POLR1A-208ENST00000486964 NHSL1Q5SYE7 1610 aa12.32□□□□□ -0.44
POLR1A-208ENST00000486964 GAS2L2Q8NHY3 880 aa12.32□□□□□ -0.44
POLR1A-208ENST00000486964 CFAP44Q96MT7 982 aa12.32□□□□□ -0.44
POLR1A-208ENST00000486964 CRYBG1Q9Y4K1 1723 aa12.32□□□□□ -0.44
POLR1A-208ENST00000486964 LTN1O94822 1766 aa12.31□□□□□ -0.44
POLR1A-208ENST00000486964 FAM83GA6ND36 823 aa12.31□□□□□ -0.44
POLR1A-208ENST00000486964 CHL1O00533 1208 aa12.31□□□□□ -0.44
POLR1A-208ENST00000486964 RARSP54136 660 aaKnown RBP12.31□□□□□ -0.44
POLR1A-208ENST00000486964 GNAI1P63096 354 aa12.31□□□□□ -0.44
POLR1A-208ENST00000486964 LRRC59Q96AG4 307 aaKnown RBP12.31□□□□□ -0.44
POLR1A-208ENST00000486964 THUMPD2Q9BTF0 503 aaKnown RBP12.31□□□□□ -0.44
POLR1A-208ENST00000486964 CRB1P82279 1406 aa12.3□□□□□ -0.44
POLR1A-208ENST00000486964 KIAA0232Q92628 1395 aa12.3□□□□□ -0.44
POLR1A-208ENST00000486964 EXOSC9Q06265 439 aaKnown RBP12.3□□□□□ -0.44
POLR1A-208ENST00000486964 POTEAQ6S8J7 498 aa12.3□□□□□ -0.44
POLR1A-208ENST00000486964 TSR2Q969E8 191 aaKnown RBP12.3□□□□□ -0.44
POLR1A-208ENST00000486964 CRBNQ96SW2 442 aa12.3□□□□□ -0.44
POLR1A-208ENST00000486964 AHDC1Q5TGY3 1603 aaPredicted RBP12.3□□□□□ -0.44
POLR1A-208ENST00000486964 BCAR3O75815 825 aa12.29□□□□□ -0.44
POLR1A-208ENST00000486964 DCTN1Q14203 1278 aa12.29□□□□□ -0.44
POLR1A-208ENST00000486964 USHBP1Q8N6Y0 703 aa12.29□□□□□ -0.44
POLR1A-208ENST00000486964 LMO7Q8WWI1 1683 aa12.29□□□□□ -0.44
POLR1A-208ENST00000486964 PLEKHG2Q9H7P9 1386 aa12.29□□□□□ -0.44
POLR1A-208ENST00000486964 CAMTA1Q9Y6Y1 1673 aa12.29□□□□□ -0.44
POLR1A-208ENST00000486964 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
POLR1A-208ENST00000486964 IL17REQ8NFR9 667 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 PHLPP1O60346 1717 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 ZBTB7CA1YPR0 619 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 PLIN1O60240 522 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 VAMP4O75379 141 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
POLR1A-208ENST00000486964 NBR1Q14596 966 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 CHRNA2Q15822 529 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 AMOTQ4VCS5 1084 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 MCM10Q7L590 875 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 ZNF428Q96B54 188 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
POLR1A-208ENST00000486964 GNAT3A8MTJ3 354 aa12.27□□□□□ -0.45
POLR1A-208ENST00000486964 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
POLR1A-208ENST00000486964 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
POLR1A-208ENST00000486964 BABAM1Q9NWV8 329 aa12.27□□□□□ -0.45
POLR1A-208ENST00000486964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■■□□□ 12.1
POLR1A-208ENST00000486964 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
POLR1A-208ENST00000486964 AAMPQ13685 434 aa12.26□□□□□ -0.45
POLR1A-208ENST00000486964 PDE3AQ14432 1141 aa12.25□□□□□ -0.45
POLR1A-208ENST00000486964 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
POLR1A-208ENST00000486964 AKAP4Q5JQC9 854 aa12.25□□□□□ -0.45
POLR1A-208ENST00000486964 C20orf194Q5TEA3 1177 aa12.25□□□□□ -0.45
POLR1A-208ENST00000486964 NPM2Q86SE8 214 aaKnown RBP12.25□□□□□ -0.45
POLR1A-208ENST00000486964 MAP3K5Q99683 1374 aa12.25□□□□□ -0.45
POLR1A-208ENST00000486964 TSPYL6Q8N831 410 aa12.24□□□□□ -0.45
POLR1A-208ENST00000486964 C8orf58Q8NAV2 365 aa12.24□□□□□ -0.45
POLR1A-208ENST00000486964 SSH1Q8WYL5 1049 aa12.24□□□□□ -0.45
POLR1A-208ENST00000486964 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
POLR1A-208ENST00000486964 PRDM11Q9NQV5 511 aa12.24□□□□□ -0.45
POLR1A-208ENST00000486964 WDR17Q8IZU2 1322 aa12.23□□□□□ -0.45
POLR1A-208ENST00000486964 DLG5Q8TDM6 1919 aa12.23□□□□□ -0.45
POLR1A-208ENST00000486964 FAM161AQ3B820 660 aa12.23□□□□□ -0.45
POLR1A-208ENST00000486964 NLRP2Q9NX02 1062 aa12.23□□□□□ -0.45
POLR1A-208ENST00000486964 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
POLR1A-208ENST00000486964 LAS1LQ9Y4W2 734 aaKnown RBP12.23□□□□□ -0.45
POLR1A-208ENST00000486964 COL16A1Q07092 1604 aaPredicted RBP12.23□□□□□ -0.45
POLR1A-208ENST00000486964 COL22A1Q8NFW1 1626 aaPredicted RBP12.22□□□□□ -0.45
POLR1A-208ENST00000486964 TAF7Q15545 349 aaPredicted RBP12.22□□□□□ -0.45
POLR1A-208ENST00000486964 CARD10Q9BWT7 1032 aa12.22□□□□□ -0.45
POLR1A-208ENST00000486964 COL5A2P05997 1499 aaPredicted RBP12.22□□□□□ -0.45
POLR1A-208ENST00000486964 FAM208AQ9UK61 1670 aaKnown RBP12.22□□□□□ -0.45
POLR1A-208ENST00000486964 SRCAPQ6ZRS2 3230 aa12.22□□□□□ -0.45
POLR1A-208ENST00000486964 LGR6Q9HBX8 967 aa12.21□□□□□ -0.45
POLR1A-208ENST00000486964 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
POLR1A-208ENST00000486964 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
POLR1A-208ENST00000486964 TWISTNBQ3B726 338 aaPredicted RBP12.2□□□□□ -0.46
POLR1A-208ENST00000486964 ZNF530Q6P9A1 599 aaPredicted RBP12.2□□□□□ -0.46
POLR1A-208ENST00000486964 MRPL50Q8N5N7 158 aaKnown RBP12.2□□□□□ -0.46
POLR1A-208ENST00000486964 ABCA3Q99758 1704 aa12.2□□□□□ -0.46
POLR1A-208ENST00000486964 LRRC37A3O60309 1634 aa12.2□□□□□ -0.46
POLR1A-208ENST00000486964 OVOS2A0A0G2JMS6 1433 aa12.2□□□□□ -0.46
POLR1A-208ENST00000486964 RGPD5Q99666 1765 aa12.2□□□□□ -0.46
POLR1A-208ENST00000486964 JCADQ9P266 1359 aa12.2□□□□□ -0.46
POLR1A-208ENST00000486964 RNMTO43148 476 aaKnown RBP12.2□□□□□ -0.46
POLR1A-208ENST00000486964 RAPGEF4Q8WZA2 1011 aa12.2□□□□□ -0.46
POLR1A-208ENST00000486964 ARHGAP45Q92619 1136 aa12.2□□□□□ -0.46
POLR1A-208ENST00000486964 CSB-PGBD3P0DP91 1061 aa12.19□□□□□ -0.46
POLR1A-208ENST00000486964 MIS18AQ9NYP9 233 aa12.19□□□□□ -0.46
POLR1A-208ENST00000486964 SPG7Q9UQ90 795 aa12.19□□□□□ -0.46
POLR1A-208ENST00000486964 MEGF6O75095 1541 aa12.19□□□□□ -0.46
POLR1A-208ENST00000486964 SOS1Q07889 1333 aaPredicted RBP12.18□□□□□ -0.46
POLR1A-208ENST00000486964 RLBP1P12271 317 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms