RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 PER1O15534 1290 aaPredicted RBP21.83■■□□□ 1.09
HDAC8-218ENST00000486704 TNNT2P45379 298 aaPredicted RBP21.83■■□□□ 1.09
HDAC8-218ENST00000486704 USHBP1Q8N6Y0 703 aa21.83■■□□□ 1.09
HDAC8-218ENST00000486704 LRP5O75197 1615 aa21.82■■□□□ 1.08
HDAC8-218ENST00000486704 MORC1Q86VD1 984 aa21.82■■□□□ 1.08
HDAC8-218ENST00000486704 RAPGEF4Q8WZA2 1011 aa21.82■■□□□ 1.08
HDAC8-218ENST00000486704 NPC1L1Q9UHC9 1359 aa21.82■■□□□ 1.08
HDAC8-218ENST00000486704 PTF1AQ7RTS3 328 aa21.81■■□□□ 1.08
HDAC8-218ENST00000486704 ZCRB1Q8TBF4 217 aaKnown RBP21.81■■□□□ 1.08
HDAC8-218ENST00000486704 PLEKHG2Q9H7P9 1386 aa21.81■■□□□ 1.08
HDAC8-218ENST00000486704 TATP17735 454 aaPredicted RBP21.79■■□□□ 1.08
HDAC8-218ENST00000486704 EIF4A2Q14240 407 aaKnown RBP21.78■■□□□ 1.08
HDAC8-218ENST00000486704 TOGARAM1Q9Y4F4 1720 aa21.77■■□□□ 1.08
HDAC8-218ENST00000486704 KCNQ2O43526 872 aa21.77■■□□□ 1.08
HDAC8-218ENST00000486704 DDX54Q8TDD1 881 aaKnown RBP21.77■■□□□ 1.08
HDAC8-218ENST00000486704 EYA1Q99502 592 aa21.77■■□□□ 1.08
HDAC8-218ENST00000486704 LY75O60449 1722 aa21.77■■□□□ 1.08
HDAC8-218ENST00000486704 PCDH11XQ9BZA7 1347 aa21.77■■□□□ 1.07
HDAC8-218ENST00000486704 PCDH11YQ9BZA8 1340 aa21.77■■□□□ 1.07
HDAC8-218ENST00000486704 ITGB4P16144 1822 aa21.76■■□□□ 1.07
HDAC8-218ENST00000486704 PAPPAQ13219 1627 aa21.76■■□□□ 1.07
HDAC8-218ENST00000486704 IGSF1Q8N6C5 1336 aa21.76■■□□□ 1.07
HDAC8-218ENST00000486704 ACSBG1Q96GR2 724 aa21.75■■□□□ 1.07
HDAC8-218ENST00000486704 PSDA5PKW4 1024 aaPredicted RBP21.72■■□□□ 1.07
HDAC8-218ENST00000486704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.72■■□□□ 1.07
HDAC8-218ENST00000486704 R3HDM1Q15032 1099 aaKnown RBP21.71■■□□□ 1.07
HDAC8-218ENST00000486704 NBPF14Q5TI25 921 aa21.71■■□□□ 1.07
HDAC8-218ENST00000486704 CASZ1Q86V15 1759 aa21.71■■□□□ 1.07
HDAC8-218ENST00000486704 CC2D1BQ5T0F9 858 aaKnown RBP21.7■■□□□ 1.06
HDAC8-218ENST00000486704 PROM2Q8N271 834 aa21.7■■□□□ 1.06
HDAC8-218ENST00000486704 SRCAPQ6ZRS2 3230 aa21.7■■□□□ 1.06
HDAC8-218ENST00000486704 CYP27B1O15528 508 aa21.69■■□□□ 1.06
HDAC8-218ENST00000486704 TXNRD1Q16881 649 aa21.69■■□□□ 1.06
HDAC8-218ENST00000486704 SPG7Q9UQ90 795 aa21.69■■□□□ 1.06
HDAC8-218ENST00000486704 QSER1Q2KHR3 1735 aa21.69■■□□□ 1.06
HDAC8-218ENST00000486704 KDRP35968 1356 aa21.68■■□□□ 1.06
HDAC8-218ENST00000486704 COL3A1P02461 1466 aaPredicted RBP21.66■■□□□ 1.06
HDAC8-218ENST00000486704 PRIM1P49642 420 aaKnown RBP21.66■■□□□ 1.06
HDAC8-218ENST00000486704 MTHFSP49914 203 aa21.66■■□□□ 1.06
HDAC8-218ENST00000486704 IL13P35225 146 aa21.65■■□□□ 1.06
HDAC8-218ENST00000486704 NKX1-1Q15270 411 aaPredicted RBP21.65■■□□□ 1.06
HDAC8-218ENST00000486704 ANO8Q9HCE9 1232 aaPredicted RBP21.65■■□□□ 1.06
HDAC8-218ENST00000486704 SYTL4Q96C24 671 aaPredicted RBP21.64■■□□□ 1.05
HDAC8-218ENST00000486704 TAF1LQ8IZX4 1826 aa21.64■■□□□ 1.05
HDAC8-218ENST00000486704 VIRMAQ69YN4 1812 aaKnown RBP21.63■■□□□ 1.05
HDAC8-218ENST00000486704 TUBGCP6Q96RT7 1819 aa21.63■■□□□ 1.05
HDAC8-218ENST00000486704 C5P01031 1676 aa21.63■■□□□ 1.05
HDAC8-218ENST00000486704 SLC27A3Q5K4L6 730 aa21.61■■□□□ 1.05
HDAC8-218ENST00000486704 PHKG2P15735 406 aa21.6■■□□□ 1.05
HDAC8-218ENST00000486704 AEBP1Q8IUX7 1158 aa21.6■■□□□ 1.05
HDAC8-218ENST00000486704 IFNL2Q8IZJ0 200 aa21.6■■□□□ 1.05
HDAC8-218ENST00000486704 SCN11AQ9UI33 1791 aa21.6■■□□□ 1.05
HDAC8-218ENST00000486704 STK32BQ9NY57 414 aa21.59■■□□□ 1.05
HDAC8-218ENST00000486704 AMOTQ4VCS5 1084 aa21.58■■□□□ 1.05
HDAC8-218ENST00000486704 SULT6B1Q6IMI4 303 aa21.58■■□□□ 1.05
HDAC8-218ENST00000486704 LRRC4BQ9NT99 713 aa21.58■■□□□ 1.05
HDAC8-218ENST00000486704 DIAPH1O60610 1272 aaKnown RBP21.57■■□□□ 1.04
HDAC8-218ENST00000486704 SLC15A2Q16348 729 aa21.57■■□□□ 1.04
HDAC8-218ENST00000486704 PLEKHO1Q53GL0 409 aaPredicted RBP21.57■■□□□ 1.04
HDAC8-218ENST00000486704 ZNF831Q5JPB2 1677 aa21.56■■□□□ 1.04
HDAC8-218ENST00000486704 PALLDQ8WX93 1383 aa21.55■■□□□ 1.04
HDAC8-218ENST00000486704 ADAMTS7Q9UKP4 1686 aa21.55■■□□□ 1.04
HDAC8-218ENST00000486704 KDM6AO15550 1401 aaPredicted RBP21.55■■□□□ 1.04
HDAC8-218ENST00000486704 HSP90AB1P08238 724 aaKnown RBP21.54■■□□□ 1.04
HDAC8-218ENST00000486704 MPRIPQ6WCQ1 1025 aa21.54■■□□□ 1.04
HDAC8-218ENST00000486704 COL24A1Q17RW2 1714 aa21.54■■□□□ 1.04
HDAC8-218ENST00000486704 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
HDAC8-218ENST00000486704 ZNF530Q6P9A1 599 aaPredicted RBP21.53■■□□□ 1.04
HDAC8-218ENST00000486704 ZNF827Q17R98 1081 aa21.52■■□□□ 1.04
HDAC8-218ENST00000486704 PIGBQ92521 554 aa21.52■■□□□ 1.04
HDAC8-218ENST00000486704 SMARCC1Q92922 1105 aaPredicted RBP21.52■■□□□ 1.04
HDAC8-218ENST00000486704 AKT1S1Q96B36 256 aa21.52■■□□□ 1.04
HDAC8-218ENST00000486704 DCAF5Q96JK2 942 aa21.52■■□□□ 1.04
HDAC8-218ENST00000486704 CCNL1Q9UK58 526 aaPredicted RBP21.52■■□□□ 1.04
HDAC8-218ENST00000486704 C4BP0C0L5 1744 aa21.52■■□□□ 1.03
HDAC8-218ENST00000486704 TMOD3Q9NYL9 352 aa21.51■■□□□ 1.03
HDAC8-218ENST00000486704 ERVV-2B6SEH9 535 aa21.5■■□□□ 1.03
HDAC8-218ENST00000486704 PPP2R1AP30153 589 aa21.5■■□□□ 1.03
HDAC8-218ENST00000486704 CICQ96RK0 1608 aaPredicted RBP21.49■■□□□ 1.03
HDAC8-218ENST00000486704 HMGB2P26583 209 aaKnown RBP21.49■■□□□ 1.03
HDAC8-218ENST00000486704 C1orf141Q5JVX7 400 aa21.49■■□□□ 1.03
HDAC8-218ENST00000486704 CFAP53Q96M91 514 aa21.49■■□□□ 1.03
HDAC8-218ENST00000486704 SPON1Q9HCB6 807 aa21.49■■□□□ 1.03
HDAC8-218ENST00000486704 MRC1P22897 1456 aa21.49■■□□□ 1.03
HDAC8-218ENST00000486704 UBR3Q6ZT12 1888 aa21.49■■□□□ 1.03
HDAC8-218ENST00000486704 HMOX1P09601 288 aa21.48■■□□□ 1.03
HDAC8-218ENST00000486704 ZEB1P37275 1124 aaPredicted RBP21.48■■□□□ 1.03
HDAC8-218ENST00000486704 PDGFDQ9GZP0 370 aaPredicted RBP21.48■■□□□ 1.03
HDAC8-218ENST00000486704 COL5A3P25940 1745 aaPredicted RBP21.48■■□□□ 1.03
HDAC8-218ENST00000486704 KCNQ4P56696 695 aa21.47■■□□□ 1.03
HDAC8-218ENST00000486704 AKAP4Q5JQC9 854 aa21.45■■□□□ 1.02
HDAC8-218ENST00000486704 U2SURPO15042 1029 aaKnown RBP21.44■■□□□ 1.02
HDAC8-218ENST00000486704 PNPLA7Q6ZV29 1317 aa21.44■■□□□ 1.02
HDAC8-218ENST00000486704 SIPA1L3O60292 1781 aaPredicted RBP21.43■■□□□ 1.02
HDAC8-218ENST00000486704 MTFR1LQ9H019 292 aa21.43■■□□□ 1.02
HDAC8-218ENST00000486704 ASAP1Q9ULH1 1129 aa21.43■■□□□ 1.02
HDAC8-218ENST00000486704 LOC102724428A0A0B4J2F2 783 aa21.42■■□□□ 1.02
HDAC8-218ENST00000486704 ZBTB7AO95365 584 aa21.42■■□□□ 1.02
HDAC8-218ENST00000486704 SIK1P57059 783 aa21.42■■□□□ 1.02
HDAC8-218ENST00000486704 ATG3Q9NT62 314 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms