RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 NEXMIFQ5QGS0 1516 aa10.08□□□□□ -0.8
HDAC3-209ENST00000486618 TRIM6-TRIM34B2RNG4 842 aa10.08□□□□□ -0.8
HDAC3-209ENST00000486618 SF3B2Q13435 895 aaKnown RBP10.08□□□□□ -0.8
HDAC3-209ENST00000486618 ESCO1Q5FWF5 840 aa10.08□□□□□ -0.8
HDAC3-209ENST00000486618 LRPPRCP42704 1394 aaKnown RBP10.08□□□□□ -0.8
HDAC3-209ENST00000486618 ROBO2Q9HCK4 1378 aa10.08□□□□□ -0.8
HDAC3-209ENST00000486618 MYOM2P54296 1465 aa10.07□□□□□ -0.8
HDAC3-209ENST00000486618 BCL9LQ86UU0 1499 aa10.07□□□□□ -0.8
HDAC3-209ENST00000486618 KIAA1468Q9P260 1216 aa10.07□□□□□ -0.8
HDAC3-209ENST00000486618 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
HDAC3-209ENST00000486618 MARF1Q9Y4F3 1742 aaKnown RBP10.07□□□□□ -0.8
HDAC3-209ENST00000486618 RPGRIP1LQ68CZ1 1315 aa10.07□□□□□ -0.8
HDAC3-209ENST00000486618 GOLGA8CPA6NN73 597 aa10.06□□□□□ -0.8
HDAC3-209ENST00000486618 FOXO3O43524 673 aa10.06□□□□□ -0.8
HDAC3-209ENST00000486618 ONECUT3O60422 494 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-209ENST00000486618 CLTCL1P53675 1640 aa10.06□□□□□ -0.8
HDAC3-209ENST00000486618 BLMP54132 1417 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-209ENST00000486618 PRAG1Q86YV5 1406 aa10.06□□□□□ -0.8
HDAC3-209ENST00000486618 UNC5CLQ8IV45 518 aa10.05□□□□□ -0.8
HDAC3-209ENST00000486618 WNT2BQ93097 391 aa10.05□□□□□ -0.8
HDAC3-209ENST00000486618 CDHR5Q9HBB8 845 aa10.05□□□□□ -0.8
HDAC3-209ENST00000486618 MLLT3P42568 568 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-209ENST00000486618 THSD4Q6ZMP0 1018 aa10.04□□□□□ -0.8
HDAC3-209ENST00000486618 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.04□□□□□ -0.8
HDAC3-209ENST00000486618 XPCQ01831 940 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-209ENST00000486618 SEPT9Q9UHD8 586 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-209ENST00000486618 TSKSQ9UJT2 592 aa10.03□□□□□ -0.8
HDAC3-209ENST00000486618 PXDNQ92626 1479 aa10.03□□□□□ -0.8
HDAC3-209ENST00000486618 CDC42BPGQ6DT37 1551 aa10.02□□□□□ -0.81
HDAC3-209ENST00000486618 PTPN5P54829 565 aa10.02□□□□□ -0.81
HDAC3-209ENST00000486618 DEFB132Q7Z7B7 95 aa10.02□□□□□ -0.81
HDAC3-209ENST00000486618 LAPTM4BQ86VI4 370 aa10.02□□□□□ -0.81
HDAC3-209ENST00000486618 RALGAPBQ86X10 1494 aa10.02□□□□□ -0.81
HDAC3-209ENST00000486618 SEPT12Q8IYM1 358 aa10.01□□□□□ -0.81
HDAC3-209ENST00000486618 CDCA7LQ96GN5 454 aa10.01□□□□□ -0.81
HDAC3-209ENST00000486618 SLIT2O94813 1529 aa10.01□□□□□ -0.81
HDAC3-209ENST00000486618 SPATA31A3Q5VYP0 1347 aa10.01□□□□□ -0.81
HDAC3-209ENST00000486618 EP400Q96L91 3159 aa10□□□□□ -0.81
HDAC3-209ENST00000486618 NUTM2FA1L443 756 aa10□□□□□ -0.81
HDAC3-209ENST00000486618 PRSS12P56730 875 aa10□□□□□ -0.81
HDAC3-209ENST00000486618 VPS72Q15906 364 aa10□□□□□ -0.81
HDAC3-209ENST00000486618 CCDC9Q9Y3X0 531 aaKnown RBP10□□□□□ -0.81
HDAC3-209ENST00000486618 GLI3P10071 1580 aa10□□□□□ -0.81
HDAC3-209ENST00000486618 BRWD3Q6RI45 1802 aa10□□□□□ -0.81
HDAC3-209ENST00000486618 NAIPQ13075 1403 aa9.99□□□□□ -0.81
HDAC3-209ENST00000486618 PPLO60437 1756 aa9.99□□□□□ -0.81
HDAC3-209ENST00000486618 BAG6P46379 1132 aa9.99□□□□□ -0.81
HDAC3-209ENST00000486618 PSME1Q06323 249 aa9.99□□□□□ -0.81
HDAC3-209ENST00000486618 TRIM26Q12899 539 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-209ENST00000486618 KRT28Q7Z3Y7 464 aa9.99□□□□□ -0.81
HDAC3-209ENST00000486618 KRT27Q7Z3Y8 459 aa9.99□□□□□ -0.81
HDAC3-209ENST00000486618 ZFRQ96KR1 1074 aaKnown RBP9.99□□□□□ -0.81
HDAC3-209ENST00000486618 STK26Q9P289 416 aa9.99□□□□□ -0.81
HDAC3-209ENST00000486618 FAM198AQ9UFP1 575 aa9.99□□□□□ -0.81
HDAC3-209ENST00000486618 LRP5O75197 1615 aa9.99□□□□□ -0.81
HDAC3-209ENST00000486618 CCDC144AA2RUR9 1427 aa9.99□□□□□ -0.81
HDAC3-209ENST00000486618 WAPLQ7Z5K2 1190 aa9.98□□□□□ -0.81
HDAC3-209ENST00000486618 PACS2Q86VP3 889 aa9.98□□□□□ -0.81
HDAC3-209ENST00000486618 ANKK1Q8NFD2 765 aa9.98□□□□□ -0.81
HDAC3-209ENST00000486618 KIF1AQ12756 1690 aa9.97□□□□□ -0.81
HDAC3-209ENST00000486618 SEMA3EO15041 775 aa9.97□□□□□ -0.81
HDAC3-209ENST00000486618 FAM98CQ17RN3 349 aaKnown RBP9.97□□□□□ -0.81
HDAC3-209ENST00000486618 NPDC1Q9NQX5 325 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-209ENST00000486618 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
HDAC3-209ENST00000486618 KDM2AQ9Y2K7 1162 aa9.97□□□□□ -0.81
HDAC3-209ENST00000486618 ABCC11Q96J66 1382 aa9.97□□□□□ -0.81
HDAC3-209ENST00000486618 USP32Q8NFA0 1604 aa9.96□□□□□ -0.81
HDAC3-209ENST00000486618 A0A0G2JS52 829 aa9.96□□□□□ -0.82
HDAC3-209ENST00000486618 BCAMP50895 628 aa9.96□□□□□ -0.82
HDAC3-209ENST00000486618 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.82
HDAC3-209ENST00000486618 TECPR2O15040 1411 aa9.96□□□□□ -0.82
HDAC3-209ENST00000486618 NWD2Q9ULI1 1742 aa9.96□□□□□ -0.82
HDAC3-209ENST00000486618 SOWAHBA6NEL2 793 aa9.95□□□□□ -0.82
HDAC3-209ENST00000486618 C3orf80F5H4A9 247 aa9.95□□□□□ -0.82
HDAC3-209ENST00000486618 HRCP23327 699 aa9.95□□□□□ -0.82
HDAC3-209ENST00000486618 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
HDAC3-209ENST00000486618 SIRT1Q96EB6 747 aa9.95□□□□□ -0.82
HDAC3-209ENST00000486618 ADGRF5Q8IZF2 1346 aa9.95□□□□□ -0.82
HDAC3-209ENST00000486618 FMN2Q9NZ56 1722 aa9.95□□□□□ -0.82
HDAC3-209ENST00000486618 TNS3Q68CZ2 1445 aa9.94□□□□□ -0.82
HDAC3-209ENST00000486618 RRBP1Q9P2E9 1410 aaKnown RBP9.94□□□□□ -0.82
HDAC3-209ENST00000486618 ARHGEF10O15013 1369 aa9.94□□□□□ -0.82
HDAC3-209ENST00000486618 ANKRD30BQ9BXX2 1392 aa9.94□□□□□ -0.82
HDAC3-209ENST00000486618 SMAPO00193 183 aa9.94□□□□□ -0.82
HDAC3-209ENST00000486618 CABLES1Q8TDN4 633 aa9.94□□□□□ -0.82
HDAC3-209ENST00000486618 SBNO1A3KN83 1393 aa9.93□□□□□ -0.82
HDAC3-209ENST00000486618 RGL3Q3MIN7 710 aa9.93□□□□□ -0.82
HDAC3-209ENST00000486618 TMEM132EQ6IEE7 984 aa9.93□□□□□ -0.82
HDAC3-209ENST00000486618 PPARGC1BQ86YN6 1023 aaKnown RBP9.93□□□□□ -0.82
HDAC3-209ENST00000486618 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
HDAC3-209ENST00000486618 PLCH1Q4KWH8 1693 aa9.93□□□□□ -0.82
HDAC3-209ENST00000486618 PLEKHH1Q9ULM0 1364 aa9.92□□□□□ -0.82
HDAC3-209ENST00000486618 FAM83GA6ND36 823 aa9.92□□□□□ -0.82
HDAC3-209ENST00000486618 NBPF26B4DH59 902 aa9.92□□□□□ -0.82
HDAC3-209ENST00000486618 PADI6Q6TGC4 694 aa9.92□□□□□ -0.82
HDAC3-209ENST00000486618 TATDN2Q93075 761 aa9.92□□□□□ -0.82
HDAC3-209ENST00000486618 PNMA3Q9UL41 463 aa9.92□□□□□ -0.82
HDAC3-209ENST00000486618 YTHDC2Q9H6S0 1430 aaKnown RBP9.91□□□□□ -0.82
HDAC3-209ENST00000486618 RGPD8O14715 1765 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-209ENST00000486618 TTC13Q8NBP0 860 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms