RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 CEP126Q9P2H0 1117 aa16.36■□□□□ 0.21
PKD1-219ENST00000486339 DDX49Q9Y6V7 483 aaKnown RBP16.36■□□□□ 0.21
PKD1-219ENST00000486339 ERCC6L2Q5T890 1561 aa16.36■□□□□ 0.21
PKD1-219ENST00000486339 EXOC6BQ9Y2D4 811 aa16.36■□□□□ 0.21
PKD1-219ENST00000486339 TRPM2O94759 1503 aa16.36■□□□□ 0.21
PKD1-219ENST00000486339 TMEM2Q9UHN6 1383 aa16.36■□□□□ 0.21
PKD1-219ENST00000486339 FLT4P35916 1363 aa16.35■□□□□ 0.21
PKD1-219ENST00000486339 ADGBQ8N7X0 1667 aa16.35■□□□□ 0.21
PKD1-219ENST00000486339 TRIM27P14373 513 aa16.35■□□□□ 0.21
PKD1-219ENST00000486339 NFXL1Q6ZNB6 911 aa16.35■□□□□ 0.21
PKD1-219ENST00000486339 CFAP74Q9C0B2 1584 aa16.35■□□□□ 0.21
PKD1-219ENST00000486339 ERICH2A1L162 156 aa16.35■□□□□ 0.21
PKD1-219ENST00000486339 FLIIQ13045 1269 aa16.35■□□□□ 0.21
PKD1-219ENST00000486339 GCC2Q8IWJ2 1684 aa16.35■□□□□ 0.21
PKD1-219ENST00000486339 UBAP1LF5GYI3 381 aa16.34■□□□□ 0.21
PKD1-219ENST00000486339 RAD21O60216 631 aa16.34■□□□□ 0.21
PKD1-219ENST00000486339 MARCH6O60337 910 aa16.34■□□□□ 0.21
PKD1-219ENST00000486339 DNAAF4Q8WXU2 420 aa16.34■□□□□ 0.21
PKD1-219ENST00000486339 SMC3Q9UQE7 1217 aa16.34■□□□□ 0.21
PKD1-219ENST00000486339 GOLGA6L3A6NEY3 463 aa16.34■□□□□ 0.21
PKD1-219ENST00000486339 TRIM29Q14134 588 aa16.34■□□□□ 0.21
PKD1-219ENST00000486339 AACSQ86V21 672 aa16.34■□□□□ 0.21
PKD1-219ENST00000486339 CABLES1Q8TDN4 633 aa16.34■□□□□ 0.21
PKD1-219ENST00000486339 GCP02774 474 aa16.34■□□□□ 0.21
PKD1-219ENST00000486339 MLH3Q9UHC1 1453 aa16.33■□□□□ 0.21
PKD1-219ENST00000486339 MSNP26038 577 aaKnown RBP16.33■□□□□ 0.2
PKD1-219ENST00000486339 TTC39AQ5SRH9 613 aa16.33■□□□□ 0.2
PKD1-219ENST00000486339 CCDC85AQ96PX6 553 aaPredicted RBP16.33■□□□□ 0.2
PKD1-219ENST00000486339 HYPKQ9NX55 129 aa16.33■□□□□ 0.2
PKD1-219ENST00000486339 ZCCHC11Q5TAX3 1644 aaKnown RBP16.33■□□□□ 0.2
PKD1-219ENST00000486339 PHF14O94880 888 aa16.32■□□□□ 0.2
PKD1-219ENST00000486339 PSMA5P28066 241 aa16.32■□□□□ 0.2
PKD1-219ENST00000486339 MYD88Q99836 296 aa16.32■□□□□ 0.2
PKD1-219ENST00000486339 VPS37CA5D8V6 355 aaPredicted RBP16.32■□□□□ 0.2
PKD1-219ENST00000486339 GNL3LQ9NVN8 582 aaKnown RBP16.32■□□□□ 0.2
PKD1-219ENST00000486339 PIK3C2GO75747 1445 aa16.32■□□□□ 0.2
PKD1-219ENST00000486339 LTKP29376 864 aa16.32■□□□□ 0.2
PKD1-219ENST00000486339 PTPRCP08575 1304 aa16.32■□□□□ 0.2
PKD1-219ENST00000486339 CLSTN1O94985 981 aa16.31■□□□□ 0.2
PKD1-219ENST00000486339 NEK4P51957 841 aa16.31■□□□□ 0.2
PKD1-219ENST00000486339 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
PKD1-219ENST00000486339 MAP3K19Q56UN5 1328 aa16.31■□□□□ 0.2
PKD1-219ENST00000486339 DHX16O60231 1041 aaKnown RBP16.31■□□□□ 0.2
PKD1-219ENST00000486339 BACH2Q9BYV9 841 aa16.31■□□□□ 0.2
PKD1-219ENST00000486339 NUCB2P80303 420 aa16.31■□□□□ 0.2
PKD1-219ENST00000486339 KAT6BQ8WYB5 2073 aa16.3■□□□□ 0.2
PKD1-219ENST00000486339 TPM4P67936 248 aa16.3■□□□□ 0.2
PKD1-219ENST00000486339 VPS53Q5VIR6 699 aa16.3■□□□□ 0.2
PKD1-219ENST00000486339 LRRC59Q96AG4 307 aaKnown RBP16.3■□□□□ 0.2
PKD1-219ENST00000486339 KIF1BPQ96EK5 621 aa16.3■□□□□ 0.2
PKD1-219ENST00000486339 ZNF652Q9Y2D9 606 aa16.3■□□□□ 0.2
PKD1-219ENST00000486339 ZFYVE9O95405 1425 aa16.3■□□□□ 0.2
PKD1-219ENST00000486339 PREX2Q70Z35 1606 aa16.29■□□□□ 0.2
PKD1-219ENST00000486339 MAGI2Q86UL8 1455 aa16.29■□□□□ 0.2
PKD1-219ENST00000486339 ZCRB1Q8TBF4 217 aaKnown RBP16.29■□□□□ 0.2
PKD1-219ENST00000486339 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.29■□□□□ 0.22e-6■■■■□ 21.8
PKD1-219ENST00000486339 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
PKD1-219ENST00000486339 SKOR2Q2VWA4 1001 aaPredicted RBP16.29■□□□□ 0.2
PKD1-219ENST00000486339 ORAI2Q96SN7 254 aa16.29■□□□□ 0.2
PKD1-219ENST00000486339 EYA1Q99502 592 aa16.29■□□□□ 0.2
PKD1-219ENST00000486339 MAP4K4O95819 1239 aaPredicted RBP16.28■□□□□ 0.2
PKD1-219ENST00000486339 RABEP1Q15276 862 aa16.28■□□□□ 0.2
PKD1-219ENST00000486339 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
PKD1-219ENST00000486339 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.2
PKD1-219ENST00000486339 LRRFIP2Q9Y608 721 aaKnown RBP16.27■□□□□ 0.2
PKD1-219ENST00000486339 ANXA1P04083 346 aa16.27■□□□□ 0.2
PKD1-219ENST00000486339 FKBP4Q02790 459 aaKnown RBP eCLIP16.27■□□□□ 0.2
PKD1-219ENST00000486339 MTHFSDQ2M296 383 aaKnown RBP16.27■□□□□ 0.2
PKD1-219ENST00000486339 TEX13AQ9BXU3 409 aaPredicted RBP16.27■□□□□ 0.2
PKD1-219ENST00000486339 PI4KAP2A4QPH2 592 aa16.27■□□□□ 0.19
PKD1-219ENST00000486339 AKAP4Q5JQC9 854 aa16.27■□□□□ 0.19
PKD1-219ENST00000486339 PI4KAP1Q8N8J0 262 aa16.27■□□□□ 0.19
PKD1-219ENST00000486339 ZBTB3Q9H5J0 574 aa16.27■□□□□ 0.19
PKD1-219ENST00000486339 A0A087WZG4 1122 aa16.26■□□□□ 0.19
PKD1-219ENST00000486339 HSP90AB3PQ58FF7 597 aa16.26■□□□□ 0.19
PKD1-219ENST00000486339 EDC4Q6P2E9 1401 aaKnown RBP16.26■□□□□ 0.19
PKD1-219ENST00000486339 IGHMBP2P38935 993 aaKnown RBP16.26■□□□□ 0.19
PKD1-219ENST00000486339 PIK3R4Q99570 1358 aa16.26■□□□□ 0.19
PKD1-219ENST00000486339 KIAA2012Q0VF49 1180 aa16.26■□□□□ 0.19
PKD1-219ENST00000486339 PHACTR3Q96KR7 559 aa16.26■□□□□ 0.19
PKD1-219ENST00000486339 HOXC9P31274 260 aa16.25■□□□□ 0.19
PKD1-219ENST00000486339 MCM2P49736 904 aa16.25■□□□□ 0.19
PKD1-219ENST00000486339 CHAF1AQ13111 956 aaPredicted RBP16.25■□□□□ 0.19
PKD1-219ENST00000486339 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
PKD1-219ENST00000486339 IP6K1Q92551 441 aa16.25■□□□□ 0.19
PKD1-219ENST00000486339 ZPR1O75312 459 aa16.25■□□□□ 0.19
PKD1-219ENST00000486339 SART3Q15020 963 aaKnown RBP16.25■□□□□ 0.19
PKD1-219ENST00000486339 RAB11FIP3O75154 756 aa16.25■□□□□ 0.19
PKD1-219ENST00000486339 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.25■□□□□ 0.19
PKD1-219ENST00000486339 KDM6BO15054 1643 aa16.25■□□□□ 0.19
PKD1-219ENST00000486339 NAP1L5Q96NT1 182 aaPredicted RBP16.25■□□□□ 0.19
PKD1-219ENST00000486339 MAP3K2Q9Y2U5 619 aa16.25■□□□□ 0.19
PKD1-219ENST00000486339 METTL24Q5JXM2 366 aa16.24■□□□□ 0.19
PKD1-219ENST00000486339 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.24■□□□□ 0.19
PKD1-219ENST00000486339 PTPRTO14522 1441 aa16.24■□□□□ 0.19
PKD1-219ENST00000486339 SAFBQ15424 915 aaKnown RBP eCLIP16.24■□□□□ 0.19
PKD1-219ENST00000486339 C8orf58Q8NAV2 365 aa16.24■□□□□ 0.19
PKD1-219ENST00000486339 PPP1R1BQ9UD71 204 aaPredicted RBP16.24■□□□□ 0.19
PKD1-219ENST00000486339 TRMT112Q9UI30 125 aaKnown RBP16.24■□□□□ 0.19
PKD1-219ENST00000486339 SMARCA5O60264 1052 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 229.9 ms