RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
CCDC142-208ENST00000486335 KIF3CO14782 793 aa13.19□□□□□ -0.3
CCDC142-208ENST00000486335 DNAJC5GQ8N7S2 189 aa13.19□□□□□ -0.3
CCDC142-208ENST00000486335 SLC12A5Q9H2X9 1139 aa13.19□□□□□ -0.3
CCDC142-208ENST00000486335 USP54Q70EL1 1684 aa13.18□□□□□ -0.3
CCDC142-208ENST00000486335 SMIM5Q71RC9 77 aa13.18□□□□□ -0.3
CCDC142-208ENST00000486335 GPBP1L1Q9HC44 474 aaPredicted RBP13.18□□□□□ -0.3
CCDC142-208ENST00000486335 CD2APQ9Y5K6 639 aa13.18□□□□□ -0.3
CCDC142-208ENST00000486335 LY75O60449 1722 aa13.17□□□□□ -0.3
CCDC142-208ENST00000486335 SYTL4Q96C24 671 aaPredicted RBP13.17□□□□□ -0.3
CCDC142-208ENST00000486335 CCNL1Q9UK58 526 aaPredicted RBP13.17□□□□□ -0.3
CCDC142-208ENST00000486335 ZNF526Q8TF50 670 aaPredicted RBP13.16□□□□□ -0.3
CCDC142-208ENST00000486335 LTV1Q96GA3 475 aaPredicted RBP13.16□□□□□ -0.3
CCDC142-208ENST00000486335 MON2Q7Z3U7 1717 aa13.16□□□□□ -0.3
CCDC142-208ENST00000486335 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
CCDC142-208ENST00000486335 SIN3AQ96ST3 1273 aa13.15□□□□□ -0.3
CCDC142-208ENST00000486335 MEGF6O75095 1541 aa13.14□□□□□ -0.31
CCDC142-208ENST00000486335 LTN1O94822 1766 aa13.14□□□□□ -0.31
CCDC142-208ENST00000486335 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
CCDC142-208ENST00000486335 FAM208AQ9UK61 1670 aaKnown RBP13.13□□□□□ -0.31
CCDC142-208ENST00000486335 MSH5O43196 834 aa13.13□□□□□ -0.31
CCDC142-208ENST00000486335 HOXC9P31274 260 aa13.13□□□□□ -0.31
CCDC142-208ENST00000486335 WWC3Q9ULE0 1092 aa13.13□□□□□ -0.31
CCDC142-208ENST00000486335 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
CCDC142-208ENST00000486335 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
CCDC142-208ENST00000486335 A0A1W2PP64 1363 aa13.11□□□□□ -0.31
CCDC142-208ENST00000486335 ROCK2O75116 1388 aaKnown RBP13.11□□□□□ -0.31
CCDC142-208ENST00000486335 EDC4Q6P2E9 1401 aaKnown RBP13.11□□□□□ -0.31
CCDC142-208ENST00000486335 DOT1LQ8TEK3 1739 aa13.1□□□□□ -0.31
CCDC142-208ENST00000486335 TMC1Q8TDI8 760 aa13.1□□□□□ -0.31
CCDC142-208ENST00000486335 IGSF1Q8N6C5 1336 aa13.1□□□□□ -0.31
CCDC142-208ENST00000486335 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
CCDC142-208ENST00000486335 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
CCDC142-208ENST00000486335 USP47Q96K76 1375 aa13.08□□□□□ -0.31
CCDC142-208ENST00000486335 CLSPNQ9HAW4 1339 aa13.08□□□□□ -0.32
CCDC142-208ENST00000486335 RGPD2P0DJD1 1756 aa13.07□□□□□ -0.32
CCDC142-208ENST00000486335 CYP27B1O15528 508 aa13.07□□□□□ -0.32
CCDC142-208ENST00000486335 ZEB1P37275 1124 aaPredicted RBP13.07□□□□□ -0.32
CCDC142-208ENST00000486335 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
CCDC142-208ENST00000486335 TOGARAM1Q9Y4F4 1720 aa13.07□□□□□ -0.32
CCDC142-208ENST00000486335 APLP1P51693 650 aa13.06□□□□□ -0.32
CCDC142-208ENST00000486335 COL13A1Q5TAT6 717 aaPredicted RBP13.06□□□□□ -0.32
CCDC142-208ENST00000486335 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
CCDC142-208ENST00000486335 PALLDQ8WX93 1383 aa13.06□□□□□ -0.32
CCDC142-208ENST00000486335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
CCDC142-208ENST00000486335 HTRA3P83110 453 aa13.05□□□□□ -0.32
CCDC142-208ENST00000486335 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
CCDC142-208ENST00000486335 PIGBQ92521 554 aa13.05□□□□□ -0.32
CCDC142-208ENST00000486335 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
CCDC142-208ENST00000486335 PCNTO95613 3336 aa13.05□□□□□ -0.32
CCDC142-208ENST00000486335 AMPHP49418 695 aa13.04□□□□□ -0.32
CCDC142-208ENST00000486335 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
CCDC142-208ENST00000486335 LINC00116Q8NCU8 138 aa13.04□□□□□ -0.32
CCDC142-208ENST00000486335 TESK2Q96S53 571 aa13.04□□□□□ -0.32
CCDC142-208ENST00000486335 NMRK2Q9NPI5 230 aa13.04□□□□□ -0.32
CCDC142-208ENST00000486335 TAF1LQ8IZX4 1826 aa13.04□□□□□ -0.32
CCDC142-208ENST00000486335 C5P01031 1676 aa13.03□□□□□ -0.32
CCDC142-208ENST00000486335 TOMM70O94826 608 aa13.03□□□□□ -0.32
CCDC142-208ENST00000486335 PHF14O94880 888 aa13.03□□□□□ -0.32
CCDC142-208ENST00000486335 ITPK1Q13572 414 aa13.03□□□□□ -0.32
CCDC142-208ENST00000486335 HSP90AB2PQ58FF8 381 aa13.03□□□□□ -0.32
CCDC142-208ENST00000486335 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
CCDC142-208ENST00000486335 CGNL1Q0VF96 1302 aa13.03□□□□□ -0.32
CCDC142-208ENST00000486335 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.32
CCDC142-208ENST00000486335 FYB1O15117 783 aa13.02□□□□□ -0.33
CCDC142-208ENST00000486335 NEUROD1Q13562 356 aa13.02□□□□□ -0.33
CCDC142-208ENST00000486335 JMYQ8N9B5 988 aa13.02□□□□□ -0.33
CCDC142-208ENST00000486335 COG3Q96JB2 828 aa13.02□□□□□ -0.33
CCDC142-208ENST00000486335 C4BP0C0L5 1744 aa13.02□□□□□ -0.33
CCDC142-208ENST00000486335 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
CCDC142-208ENST00000486335 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
CCDC142-208ENST00000486335 MAP2P11137 1827 aaKnown RBP13.01□□□□□ -0.33
CCDC142-208ENST00000486335 UBR3Q6ZT12 1888 aa13.01□□□□□ -0.33
CCDC142-208ENST00000486335 A0A0G2JLW4 131 aa13□□□□□ -0.33
CCDC142-208ENST00000486335 KCNA3P22001 575 aa13□□□□□ -0.33
CCDC142-208ENST00000486335 SSFA2P28290 1259 aa13□□□□□ -0.33
CCDC142-208ENST00000486335 AK7Q96M32 723 aa13□□□□□ -0.33
CCDC142-208ENST00000486335 CARD11Q9BXL7 1154 aa13□□□□□ -0.33
CCDC142-208ENST00000486335 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
CCDC142-208ENST00000486335 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
CCDC142-208ENST00000486335 MMP10P09238 476 aa12.99□□□□□ -0.33
CCDC142-208ENST00000486335 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
CCDC142-208ENST00000486335 SIK1P57059 783 aa12.99□□□□□ -0.33
CCDC142-208ENST00000486335 RAPGEF4Q8WZA2 1011 aa12.99□□□□□ -0.33
CCDC142-208ENST00000486335 SLC4A9Q96Q91 983 aa12.99□□□□□ -0.33
CCDC142-208ENST00000486335 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
CCDC142-208ENST00000486335 NSD3Q9BZ95 1437 aa12.98□□□□□ -0.33
CCDC142-208ENST00000486335 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
CCDC142-208ENST00000486335 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
CCDC142-208ENST00000486335 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
CCDC142-208ENST00000486335 SMARCC1Q92922 1105 aaPredicted RBP12.98□□□□□ -0.33
CCDC142-208ENST00000486335 KLRG1Q96E93 195 aa12.98□□□□□ -0.33
CCDC142-208ENST00000486335 GGNBP2Q9H3C7 697 aa12.98□□□□□ -0.33
CCDC142-208ENST00000486335 RBM46Q8TBY0 533 aaKnown RBP12.97□□□□□ -0.33
CCDC142-208ENST00000486335 INSRP06213 1382 aa12.96□□□□□ -0.33
CCDC142-208ENST00000486335 DPEP1P16444 411 aa12.96□□□□□ -0.33
CCDC142-208ENST00000486335 TGFB2P61812 414 aa12.96□□□□□ -0.33
CCDC142-208ENST00000486335 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
CCDC142-208ENST00000486335 BCS1LQ9Y276 419 aa12.96□□□□□ -0.33
CCDC142-208ENST00000486335 NCAPD2Q15021 1401 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms