RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 ATP10DQ9P241 1426 aa21.81■■□□□ 1.08
TNXB-205ENST00000486148 KIF13AQ9H1H9 1805 aa21.8■■□□□ 1.08
TNXB-205ENST00000486148 RGPD1P0DJD0 1748 aa21.8■■□□□ 1.08
TNXB-205ENST00000486148 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
TNXB-205ENST00000486148 ARXQ96QS3 562 aa21.8■■□□□ 1.08
TNXB-205ENST00000486148 RBM42Q9BTD8 480 aaKnown RBP21.8■■□□□ 1.08
TNXB-205ENST00000486148 TRAK2O60296 914 aa21.8■■□□□ 1.08
TNXB-205ENST00000486148 HSP90AB1P08238 724 aaKnown RBP21.8■■□□□ 1.08
TNXB-205ENST00000486148 L1TD1Q5T7N2 865 aaKnown RBP21.8■■□□□ 1.08
TNXB-205ENST00000486148 CDC45O75419 566 aa21.79■■□□□ 1.08
TNXB-205ENST00000486148 C16orf71Q8IYS4 520 aaPredicted RBP21.79■■□□□ 1.08
TNXB-205ENST00000486148 KIAA0232Q92628 1395 aa21.79■■□□□ 1.08
TNXB-205ENST00000486148 HSP90AA2PQ14568 343 aaPredicted RBP21.79■■□□□ 1.08
TNXB-205ENST00000486148 ANKRD44Q8N8A2 993 aa21.79■■□□□ 1.08
TNXB-205ENST00000486148 USP31Q70CQ4 1352 aa21.78■■□□□ 1.08
TNXB-205ENST00000486148 SLC26A8Q96RN1 970 aa21.78■■□□□ 1.08
TNXB-205ENST00000486148 MSH6P52701 1360 aa21.78■■□□□ 1.08
TNXB-205ENST00000486148 PLEKHG1Q9ULL1 1385 aa21.78■■□□□ 1.08
TNXB-205ENST00000486148 CRB1P82279 1406 aa21.78■■□□□ 1.08
TNXB-205ENST00000486148 PTPRUQ92729 1446 aa21.78■■□□□ 1.08
TNXB-205ENST00000486148 CEP85Q6P2H3 762 aa21.77■■□□□ 1.08
TNXB-205ENST00000486148 MIS18AQ9NYP9 233 aa21.77■■□□□ 1.08
TNXB-205ENST00000486148 HAP1P54257 671 aaPredicted RBP21.76■■□□□ 1.07
TNXB-205ENST00000486148 SSH2Q76I76 1423 aa21.76■■□□□ 1.07
TNXB-205ENST00000486148 FOXO3O43524 673 aa21.76■■□□□ 1.07
TNXB-205ENST00000486148 OTUD7AQ8TE49 926 aaPredicted RBP21.76■■□□□ 1.07
TNXB-205ENST00000486148 MAP3K19Q56UN5 1328 aa21.76■■□□□ 1.07
TNXB-205ENST00000486148 FSD2A1L4K1 749 aa21.75■■□□□ 1.07
TNXB-205ENST00000486148 TTC22Q5TAA0 569 aa21.75■■□□□ 1.07
TNXB-205ENST00000486148 TNPO1Q92973 898 aaKnown RBP21.75■■□□□ 1.07
TNXB-205ENST00000486148 FOXD4L1Q9NU39 408 aa21.75■■□□□ 1.07
TNXB-205ENST00000486148 RTL1A6NKG5 1358 aa21.75■■□□□ 1.07
TNXB-205ENST00000486148 RRP9O43818 475 aaKnown RBP21.75■■□□□ 1.07
TNXB-205ENST00000486148 MEIS3Q99687 375 aa21.75■■□□□ 1.07
TNXB-205ENST00000486148 XRCC6P12956 609 aaKnown RBP eCLIP21.74■■□□□ 1.07
TNXB-205ENST00000486148 RPAP2Q8IXW5 612 aaPredicted RBP21.74■■□□□ 1.07
TNXB-205ENST00000486148 PTPRCP08575 1304 aa21.74■■□□□ 1.07
TNXB-205ENST00000486148 RIMS1Q86UR5 1692 aaKnown RBP21.74■■□□□ 1.07
TNXB-205ENST00000486148 GOLGA6L3A6NEY3 463 aa21.74■■□□□ 1.07
TNXB-205ENST00000486148 DDX11L8A8MPP1 907 aa21.74■■□□□ 1.07
TNXB-205ENST00000486148 CLCN1P35523 988 aa21.74■■□□□ 1.07
TNXB-205ENST00000486148 K7ELQ4 463 aaPredicted RBP21.73■■□□□ 1.07
TNXB-205ENST00000486148 HSP90AA1P07900 732 aaKnown RBP21.73■■□□□ 1.07
TNXB-205ENST00000486148 CIZ1Q9ULV3 898 aaPredicted RBP21.73■■□□□ 1.07
TNXB-205ENST00000486148 SLC4A2P04920 1241 aa21.73■■□□□ 1.07
TNXB-205ENST00000486148 MTHFSDQ2M296 383 aaKnown RBP21.73■■□□□ 1.07
TNXB-205ENST00000486148 SMARCA5O60264 1052 aaPredicted RBP21.72■■□□□ 1.07
TNXB-205ENST00000486148 RAB3GAP1Q15042 981 aa21.72■■□□□ 1.07
TNXB-205ENST00000486148 ARHGEF10O15013 1369 aa21.72■■□□□ 1.07
TNXB-205ENST00000486148 APBB1O00213 710 aa21.72■■□□□ 1.07
TNXB-205ENST00000486148 CEBPAP49715 358 aaPredicted RBP21.72■■□□□ 1.07
TNXB-205ENST00000486148 PANK2Q9BZ23 570 aa21.72■■□□□ 1.07
TNXB-205ENST00000486148 G2E3Q7L622 706 aa21.71■■□□□ 1.07
TNXB-205ENST00000486148 FMN2Q9NZ56 1722 aa21.7■■□□□ 1.06
TNXB-205ENST00000486148 GAS2L2Q8NHY3 880 aa21.7■■□□□ 1.06
TNXB-205ENST00000486148 AMOTL2Q9Y2J4 779 aa21.7■■□□□ 1.06
TNXB-205ENST00000486148 TSPYL4Q9UJ04 414 aa21.69■■□□□ 1.06
TNXB-205ENST00000486148 TTC21AQ8NDW8 1320 aa21.68■■□□□ 1.06
TNXB-205ENST00000486148 FLT4P35916 1363 aa21.68■■□□□ 1.06
TNXB-205ENST00000486148 F6X3S4 739 aa21.68■■□□□ 1.06
TNXB-205ENST00000486148 SBNO1A3KN83 1393 aa21.67■■□□□ 1.06
TNXB-205ENST00000486148 SDSP20132 328 aa21.67■■□□□ 1.06
TNXB-205ENST00000486148 RTF1Q92541 710 aaKnown RBP21.67■■□□□ 1.06
TNXB-205ENST00000486148 CEP170BQ9Y4F5 1589 aaPredicted RBP21.67■■□□□ 1.06
TNXB-205ENST00000486148 EYA1Q99502 592 aa21.67■■□□□ 1.06
TNXB-205ENST00000486148 KDRP35968 1356 aa21.67■■□□□ 1.06
TNXB-205ENST00000486148 USP26Q9BXU7 913 aa21.66■■□□□ 1.06
TNXB-205ENST00000486148 RGPD8O14715 1765 aaPredicted RBP21.66■■□□□ 1.06
TNXB-205ENST00000486148 SLC4A10Q6U841 1118 aa21.66■■□□□ 1.06
TNXB-205ENST00000486148 NGDNQ8NEJ9 315 aaKnown RBP21.65■■□□□ 1.06
TNXB-205ENST00000486148 GBP4Q96PP9 640 aa21.65■■□□□ 1.06
TNXB-205ENST00000486148 EID1Q9Y6B2 187 aa21.65■■□□□ 1.06
TNXB-205ENST00000486148 AMPHP49418 695 aa21.64■■□□□ 1.06
TNXB-205ENST00000486148 IGSF1Q8N6C5 1336 aa21.64■■□□□ 1.06
TNXB-205ENST00000486148 SSFA2P28290 1259 aa21.63■■□□□ 1.05
TNXB-205ENST00000486148 RABEP1Q15276 862 aa21.63■■□□□ 1.05
TNXB-205ENST00000486148 DIP2AQ14689 1571 aa21.63■■□□□ 1.05
TNXB-205ENST00000486148 PIK3C2AO00443 1686 aa21.62■■□□□ 1.05
TNXB-205ENST00000486148 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
TNXB-205ENST00000486148 CCT4P50991 539 aaKnown RBP21.61■■□□□ 1.05
TNXB-205ENST00000486148 TBX22Q9Y458 520 aa21.61■■□□□ 1.05
TNXB-205ENST00000486148 HMMRO75330 724 aa21.6■■□□□ 1.05
TNXB-205ENST00000486148 MRE11P49959 708 aa21.6■■□□□ 1.05
TNXB-205ENST00000486148 SLIT1O75093 1534 aa21.59■■□□□ 1.05
TNXB-205ENST00000486148 ARHGAP23Q9P227 1491 aa21.59■■□□□ 1.05
TNXB-205ENST00000486148 GRPEL1Q9HAV7 217 aa21.59■■□□□ 1.05
TNXB-205ENST00000486148 NLRP6P59044 892 aa21.58■■□□□ 1.05
TNXB-205ENST00000486148 NUTM2GQ5VZR2 741 aa21.58■■□□□ 1.05
TNXB-205ENST00000486148 CASC1Q6TDU7 716 aa21.58■■□□□ 1.04
TNXB-205ENST00000486148 NECTIN2Q92692 538 aa21.57■■□□□ 1.04
TNXB-205ENST00000486148 STK31Q9BXU1 1019 aa21.57■■□□□ 1.04
TNXB-205ENST00000486148 EXOC6BQ9Y2D4 811 aa21.57■■□□□ 1.04
TNXB-205ENST00000486148 AK9Q5TCS8 1911 aa21.57■■□□□ 1.04
TNXB-205ENST00000486148 LRRC37A3O60309 1634 aa21.56■■□□□ 1.04
TNXB-205ENST00000486148 GNAI2P04899 355 aa21.56■■□□□ 1.04
TNXB-205ENST00000486148 PDE1AP54750 535 aa21.56■■□□□ 1.04
TNXB-205ENST00000486148 GAS2L3Q86XJ1 694 aa21.56■■□□□ 1.04
TNXB-205ENST00000486148 FLIIQ13045 1269 aa21.56■■□□□ 1.04
TNXB-205ENST00000486148 SKOR2Q2VWA4 1001 aaPredicted RBP21.56■■□□□ 1.04
TNXB-205ENST00000486148 OSBPL3Q9H4L5 887 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms