RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 PCDH11YQ9BZA8 1340 aa17.07■□□□□ 0.32
SDHB-207ENST00000485515 MEGF6O75095 1541 aa17.06■□□□□ 0.32
SDHB-207ENST00000485515 PLSCR1O15162 318 aa17.05■□□□□ 0.32
SDHB-207ENST00000485515 EZH2Q15910 746 aaKnown RBP17.05■□□□□ 0.32
SDHB-207ENST00000485515 ACSBG1Q96GR2 724 aa17.05■□□□□ 0.32
SDHB-207ENST00000485515 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
SDHB-207ENST00000485515 CAMKK2Q96RR4 588 aa17.04■□□□□ 0.32
SDHB-207ENST00000485515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.04■□□□□ 0.32
SDHB-207ENST00000485515 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
SDHB-207ENST00000485515 IGSF1Q8N6C5 1336 aa17.03■□□□□ 0.32
SDHB-207ENST00000485515 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
SDHB-207ENST00000485515 SYTL4Q96C24 671 aaPredicted RBP17.03■□□□□ 0.32
SDHB-207ENST00000485515 NBPF14Q5TI25 921 aa17.02■□□□□ 0.32
SDHB-207ENST00000485515 NCAPD2Q15021 1401 aa17.02■□□□□ 0.31
SDHB-207ENST00000485515 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.31
SDHB-207ENST00000485515 SBF2Q86WG5 1849 aa17.01■□□□□ 0.31
SDHB-207ENST00000485515 KCNQ2O43526 872 aa17.01■□□□□ 0.31
SDHB-207ENST00000485515 IL13P35225 146 aa17.01■□□□□ 0.31
SDHB-207ENST00000485515 SULT6B1Q6IMI4 303 aa17.01■□□□□ 0.31
SDHB-207ENST00000485515 KAT6BQ8WYB5 2073 aa17.01■□□□□ 0.31
SDHB-207ENST00000485515 DDX10Q13206 875 aaKnown RBP17■□□□□ 0.31
SDHB-207ENST00000485515 AMOTQ4VCS5 1084 aa17■□□□□ 0.31
SDHB-207ENST00000485515 PLEKHO1Q53GL0 409 aaPredicted RBP17■□□□□ 0.31
SDHB-207ENST00000485515 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
SDHB-207ENST00000485515 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
SDHB-207ENST00000485515 PTF1AQ7RTS3 328 aa16.98■□□□□ 0.31
SDHB-207ENST00000485515 NUDCQ9Y266 331 aa16.98■□□□□ 0.31
SDHB-207ENST00000485515 U2SURPO15042 1029 aaKnown RBP16.97■□□□□ 0.31
SDHB-207ENST00000485515 CYP27B1O15528 508 aa16.97■□□□□ 0.31
SDHB-207ENST00000485515 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
SDHB-207ENST00000485515 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.31
SDHB-207ENST00000485515 PPP2R1AP30153 589 aa16.96■□□□□ 0.31
SDHB-207ENST00000485515 C1orf141Q5JVX7 400 aa16.96■□□□□ 0.31
SDHB-207ENST00000485515 HMGB2P26583 209 aaKnown RBP16.95■□□□□ 0.3
SDHB-207ENST00000485515 TXNRD1Q16881 649 aa16.95■□□□□ 0.3
SDHB-207ENST00000485515 AEBP1Q8IUX7 1158 aa16.95■□□□□ 0.3
SDHB-207ENST00000485515 KDRP35968 1356 aa16.94■□□□□ 0.3
SDHB-207ENST00000485515 HMOX1P09601 288 aa16.94■□□□□ 0.3
SDHB-207ENST00000485515 PHKG2P15735 406 aa16.94■□□□□ 0.3
SDHB-207ENST00000485515 NKX1-1Q15270 411 aaPredicted RBP16.94■□□□□ 0.3
SDHB-207ENST00000485515 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
SDHB-207ENST00000485515 MPRIPQ6WCQ1 1025 aa16.94■□□□□ 0.3
SDHB-207ENST00000485515 RGPD3A6NKT7 1758 aaPredicted RBP16.94■□□□□ 0.3
SDHB-207ENST00000485515 RGPD4Q7Z3J3 1758 aa16.94■□□□□ 0.3
SDHB-207ENST00000485515 PKD1L3Q7Z443 1732 aa16.93■□□□□ 0.3
SDHB-207ENST00000485515 SHANK3Q9BYB0 1731 aa16.93■□□□□ 0.3
SDHB-207ENST00000485515 PSDA5PKW4 1024 aaPredicted RBP16.93■□□□□ 0.3
SDHB-207ENST00000485515 R3HDM1Q15032 1099 aaKnown RBP16.93■□□□□ 0.3
SDHB-207ENST00000485515 RALBP1Q15311 655 aa16.93■□□□□ 0.3
SDHB-207ENST00000485515 SLC27A3Q5K4L6 730 aa16.92■□□□□ 0.3
SDHB-207ENST00000485515 DCAF5Q96JK2 942 aa16.92■□□□□ 0.3
SDHB-207ENST00000485515 SMARCC1Q92922 1105 aaPredicted RBP16.91■□□□□ 0.3
SDHB-207ENST00000485515 STK32BQ9NY57 414 aa16.91■□□□□ 0.3
SDHB-207ENST00000485515 TMOD3Q9NYL9 352 aa16.91■□□□□ 0.3
SDHB-207ENST00000485515 DOT1LQ8TEK3 1739 aa16.9■□□□□ 0.3
SDHB-207ENST00000485515 PROM2Q8N271 834 aa16.9■□□□□ 0.3
SDHB-207ENST00000485515 BTAF1O14981 1849 aa16.9■□□□□ 0.3
SDHB-207ENST00000485515 RREB1Q92766 1687 aa16.9■□□□□ 0.3
SDHB-207ENST00000485515 ERVV-2B6SEH9 535 aa16.89■□□□□ 0.29
SDHB-207ENST00000485515 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
SDHB-207ENST00000485515 NEFMP07197 916 aa16.88■□□□□ 0.29
SDHB-207ENST00000485515 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
SDHB-207ENST00000485515 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.29
SDHB-207ENST00000485515 AKAP4Q5JQC9 854 aa16.88■□□□□ 0.29
SDHB-207ENST00000485515 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
SDHB-207ENST00000485515 COL3A1P02461 1466 aaPredicted RBP16.87■□□□□ 0.29
SDHB-207ENST00000485515 CABP4P57796 275 aa16.87■□□□□ 0.29
SDHB-207ENST00000485515 CCNL1Q9UK58 526 aaPredicted RBP16.87■□□□□ 0.29
SDHB-207ENST00000485515 GAS2L2Q8NHY3 880 aa16.86■□□□□ 0.29
SDHB-207ENST00000485515 PIGBQ92521 554 aa16.86■□□□□ 0.29
SDHB-207ENST00000485515 FCHSD2O94868 740 aa16.85■□□□□ 0.29
SDHB-207ENST00000485515 SLC15A2Q16348 729 aa16.85■□□□□ 0.29
SDHB-207ENST00000485515 PNNQ9H307 717 aaKnown RBP16.85■□□□□ 0.29
SDHB-207ENST00000485515 PALLDQ8WX93 1383 aa16.85■□□□□ 0.29
SDHB-207ENST00000485515 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
SDHB-207ENST00000485515 MYBBP1AQ9BQG0 1328 aaKnown RBP16.84■□□□□ 0.29
SDHB-207ENST00000485515 PRKAR2BP31323 418 aa16.83■□□□□ 0.28
SDHB-207ENST00000485515 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
SDHB-207ENST00000485515 ANO8Q9HCE9 1232 aaPredicted RBP16.82■□□□□ 0.28
SDHB-207ENST00000485515 RSPH6AQ9H0K4 717 aa16.81■□□□□ 0.28
SDHB-207ENST00000485515 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
SDHB-207ENST00000485515 ITGB4P16144 1822 aa16.81■□□□□ 0.28
SDHB-207ENST00000485515 GNAT3A8MTJ3 354 aa16.8■□□□□ 0.28
SDHB-207ENST00000485515 KCNQ4P56696 695 aa16.8■□□□□ 0.28
SDHB-207ENST00000485515 NFATC2IPQ8NCF5 419 aa16.8■□□□□ 0.28
SDHB-207ENST00000485515 ASAP1Q9ULH1 1129 aa16.8■□□□□ 0.28
SDHB-207ENST00000485515 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
SDHB-207ENST00000485515 TOGARAM1Q9Y4F4 1720 aa16.79■□□□□ 0.28
SDHB-207ENST00000485515 LOC102724428A0A0B4J2F2 783 aa16.79■□□□□ 0.28
SDHB-207ENST00000485515 SIK1P57059 783 aa16.79■□□□□ 0.28
SDHB-207ENST00000485515 RTF1Q92541 710 aaKnown RBP16.79■□□□□ 0.28
SDHB-207ENST00000485515 RNMTO43148 476 aaKnown RBP16.78■□□□□ 0.28
SDHB-207ENST00000485515 ATP6V1AP38606 617 aa16.78■□□□□ 0.28
SDHB-207ENST00000485515 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
SDHB-207ENST00000485515 PRKRIP1Q9H875 184 aaPredicted RBP16.78■□□□□ 0.28
SDHB-207ENST00000485515 SPON1Q9HCB6 807 aa16.78■□□□□ 0.28
SDHB-207ENST00000485515 ATG3Q9NT62 314 aa16.78■□□□□ 0.28
SDHB-207ENST00000485515 LY75O60449 1722 aa16.78■□□□□ 0.28
SDHB-207ENST00000485515 MAP3K5Q99683 1374 aa16.77■□□□□ 0.28
SDHB-207ENST00000485515 TEFQ10587 303 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms