RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 DDX10Q13206 875 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP2-217ENST00000484546 EIF4A2Q14240 407 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP2-217ENST00000484546 APBA3O96018 575 aa15.84■□□□□ 0.13
CDK5RAP2-217ENST00000484546 MTHFSP49914 203 aa15.84■□□□□ 0.13
CDK5RAP2-217ENST00000484546 EYA1Q99502 592 aa15.84■□□□□ 0.13
CDK5RAP2-217ENST00000484546 DOT1LQ8TEK3 1739 aa15.84■□□□□ 0.13
CDK5RAP2-217ENST00000484546 PARD3Q8TEW0 1356 aa15.84■□□□□ 0.13
CDK5RAP2-217ENST00000484546 PTF1AQ7RTS3 328 aa15.83■□□□□ 0.12
CDK5RAP2-217ENST00000484546 NUP188Q5SRE5 1749 aa15.82■□□□□ 0.12
CDK5RAP2-217ENST00000484546 ZCRB1Q8TBF4 217 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP2-217ENST00000484546 DDX54Q8TDD1 881 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP2-217ENST00000484546 CFAP53Q96M91 514 aa15.82■□□□□ 0.12
CDK5RAP2-217ENST00000484546 CAMKK2Q96RR4 588 aa15.82■□□□□ 0.12
CDK5RAP2-217ENST00000484546 BCL11BQ9C0K0 894 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP2-217ENST00000484546 EZH2Q15910 746 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP2-217ENST00000484546 IGSF1Q8N6C5 1336 aa15.81■□□□□ 0.12
CDK5RAP2-217ENST00000484546 BTAF1O14981 1849 aa15.8■□□□□ 0.12
CDK5RAP2-217ENST00000484546 PCDH11XQ9BZA7 1347 aa15.79■□□□□ 0.12
CDK5RAP2-217ENST00000484546 PCDH11YQ9BZA8 1340 aa15.79■□□□□ 0.12
CDK5RAP2-217ENST00000484546 KCNQ2O43526 872 aa15.79■□□□□ 0.12
CDK5RAP2-217ENST00000484546 DIAPH1O60610 1272 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP2-217ENST00000484546 ACSBG1Q96GR2 724 aa15.79■□□□□ 0.12
CDK5RAP2-217ENST00000484546 COL3A1P02461 1466 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP2-217ENST00000484546 PLEKHG2Q9H7P9 1386 aa15.78■□□□□ 0.12
CDK5RAP2-217ENST00000484546 ZNF316A6NFI3 1004 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP2-217ENST00000484546 SPG7Q9UQ90 795 aa15.78■□□□□ 0.12
CDK5RAP2-217ENST00000484546 TOGARAM1Q9Y4F4 1720 aa15.77■□□□□ 0.12
CDK5RAP2-217ENST00000484546 IL13P35225 146 aa15.77■□□□□ 0.12
CDK5RAP2-217ENST00000484546 PPP2R1AP30153 589 aa15.76■□□□□ 0.11
CDK5RAP2-217ENST00000484546 U2SURPO15042 1029 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP2-217ENST00000484546 PLSCR1O15162 318 aa15.75■□□□□ 0.11
CDK5RAP2-217ENST00000484546 CYP27B1O15528 508 aa15.75■□□□□ 0.11
CDK5RAP2-217ENST00000484546 SULT6B1Q6IMI4 303 aa15.75■□□□□ 0.11
CDK5RAP2-217ENST00000484546 AEBP1Q8IUX7 1158 aa15.75■□□□□ 0.11
CDK5RAP2-217ENST00000484546 NUDCQ9Y266 331 aa15.75■□□□□ 0.11
CDK5RAP2-217ENST00000484546 KAT6BQ8WYB5 2073 aa15.75■□□□□ 0.11
CDK5RAP2-217ENST00000484546 KDRP35968 1356 aa15.75■□□□□ 0.11
CDK5RAP2-217ENST00000484546 RALBP1Q15311 655 aa15.74■□□□□ 0.11
CDK5RAP2-217ENST00000484546 SYTL4Q96C24 671 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP2-217ENST00000484546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.73■□□□□ 0.111e-7■□□□□ 9.3
CDK5RAP2-217ENST00000484546 PRIM1P49642 420 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP2-217ENST00000484546 PLEKHO1Q53GL0 409 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP2-217ENST00000484546 ITGB4P16144 1822 aa15.71■□□□□ 0.11
CDK5RAP2-217ENST00000484546 PSDA5PKW4 1024 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP2-217ENST00000484546 HMOX1P09601 288 aa15.71■□□□□ 0.11
CDK5RAP2-217ENST00000484546 AMOTQ4VCS5 1084 aa15.71■□□□□ 0.11
CDK5RAP2-217ENST00000484546 PAPPAQ13219 1627 aa15.71■□□□□ 0.11
CDK5RAP2-217ENST00000484546 LY75O60449 1722 aa15.71■□□□□ 0.1
CDK5RAP2-217ENST00000484546 PHKG2P15735 406 aa15.7■□□□□ 0.1
CDK5RAP2-217ENST00000484546 NKX1-1Q15270 411 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP2-217ENST00000484546 TXNRD1Q16881 649 aa15.7■□□□□ 0.1
CDK5RAP2-217ENST00000484546 C1orf141Q5JVX7 400 aa15.7■□□□□ 0.1
CDK5RAP2-217ENST00000484546 IFNL2Q8IZJ0 200 aa15.7■□□□□ 0.1
CDK5RAP2-217ENST00000484546 PROM2Q8N271 834 aa15.7■□□□□ 0.1
CDK5RAP2-217ENST00000484546 R3HDM1Q15032 1099 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP2-217ENST00000484546 HSP90AB1P08238 724 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP2-217ENST00000484546 NBPF14Q5TI25 921 aa15.68■□□□□ 0.1
CDK5RAP2-217ENST00000484546 ZNF530Q6P9A1 599 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP2-217ENST00000484546 ANO8Q9HCE9 1232 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP2-217ENST00000484546 MYBBP1AQ9BQG0 1328 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP2-217ENST00000484546 U2AF1L5P0DN76 240 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP2-217ENST00000484546 U2AF1Q01081 240 aaKnown RBP eCLIP15.67■□□□□ 0.12e-7■■□□□ 12.7
CDK5RAP2-217ENST00000484546 LRP5O75197 1615 aa15.66■□□□□ 0.1
CDK5RAP2-217ENST00000484546 NEFMP07197 916 aa15.66■□□□□ 0.1
CDK5RAP2-217ENST00000484546 KDM6AO15550 1401 aaPredicted RBP15.66■□□□□ 0.1
CDK5RAP2-217ENST00000484546 MPRIPQ6WCQ1 1025 aa15.64■□□□□ 0.09
CDK5RAP2-217ENST00000484546 CASZ1Q86V15 1759 aa15.64■□□□□ 0.09
CDK5RAP2-217ENST00000484546 PALLDQ8WX93 1383 aa15.63■□□□□ 0.09
CDK5RAP2-217ENST00000484546 SCN11AQ9UI33 1791 aa15.63■□□□□ 0.09
CDK5RAP2-217ENST00000484546 SLC27A3Q5K4L6 730 aa15.63■□□□□ 0.09
CDK5RAP2-217ENST00000484546 PRKRIP1Q9H875 184 aaPredicted RBP15.63■□□□□ 0.09
CDK5RAP2-217ENST00000484546 LRRC4BQ9NT99 713 aa15.63■□□□□ 0.09
CDK5RAP2-217ENST00000484546 TMOD3Q9NYL9 352 aa15.63■□□□□ 0.09
CDK5RAP2-217ENST00000484546 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
CDK5RAP2-217ENST00000484546 PIGBQ92521 554 aa15.62■□□□□ 0.09
CDK5RAP2-217ENST00000484546 DCAF5Q96JK2 942 aa15.62■□□□□ 0.09
CDK5RAP2-217ENST00000484546 STK32BQ9NY57 414 aa15.62■□□□□ 0.09
CDK5RAP2-217ENST00000484546 C5P01031 1676 aa15.61■□□□□ 0.09
CDK5RAP2-217ENST00000484546 ADAMTS7Q9UKP4 1686 aa15.61■□□□□ 0.09
CDK5RAP2-217ENST00000484546 ANP32CO43423 234 aa15.61■□□□□ 0.09
CDK5RAP2-217ENST00000484546 AKAP4Q5JQC9 854 aa15.61■□□□□ 0.09
CDK5RAP2-217ENST00000484546 GAS2L2Q8NHY3 880 aa15.61■□□□□ 0.09
CDK5RAP2-217ENST00000484546 PNNQ9H307 717 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP2-217ENST00000484546 VIRMAQ69YN4 1812 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP2-217ENST00000484546 TUBGCP6Q96RT7 1819 aa15.6■□□□□ 0.09
CDK5RAP2-217ENST00000484546 FCHSD2O94868 740 aa15.6■□□□□ 0.09
CDK5RAP2-217ENST00000484546 CABP4P57796 275 aa15.6■□□□□ 0.09
CDK5RAP2-217ENST00000484546 ZNF827Q17R98 1081 aa15.6■□□□□ 0.09
CDK5RAP2-217ENST00000484546 CCNL1Q9UK58 526 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP2-217ENST00000484546 QSER1Q2KHR3 1735 aa15.6■□□□□ 0.09
CDK5RAP2-217ENST00000484546 MRC1P22897 1456 aa15.59■□□□□ 0.09
CDK5RAP2-217ENST00000484546 TAF1LQ8IZX4 1826 aa15.59■□□□□ 0.09
CDK5RAP2-217ENST00000484546 ERVV-2B6SEH9 535 aa15.59■□□□□ 0.09
CDK5RAP2-217ENST00000484546 KCNQ4P56696 695 aa15.59■□□□□ 0.09
CDK5RAP2-217ENST00000484546 WDR43Q15061 677 aaKnown RBP eCLIP15.59■□□□□ 0.09
CDK5RAP2-217ENST00000484546 SLC15A2Q16348 729 aa15.59■□□□□ 0.09
CDK5RAP2-217ENST00000484546 MTHFSDQ2M296 383 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP2-217ENST00000484546 SMARCC1Q92922 1105 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP2-217ENST00000484546 RSPH6AQ9H0K4 717 aa15.59■□□□□ 0.09
CDK5RAP2-217ENST00000484546 MAPK8IP3Q9UPT6 1336 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms