RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 PARD3Q8TEW0 1356 aa30.14■■■□□ 2.41
CNTNAP3B-208ENST00000484254 PTF1AQ7RTS3 328 aa30.13■■■□□ 2.41
CNTNAP3B-208ENST00000484254 SHANK3Q9BYB0 1731 aa30.12■■■□□ 2.41
CNTNAP3B-208ENST00000484254 NHSQ6T4R5 1651 aa30.09■■■□□ 2.41
CNTNAP3B-208ENST00000484254 PLSCR1O15162 318 aa30.08■■■□□ 2.41
CNTNAP3B-208ENST00000484254 KCNQ2O43526 872 aa30.08■■■□□ 2.41
CNTNAP3B-208ENST00000484254 ZEB1P37275 1124 aaPredicted RBP30.08■■■□□ 2.41
CNTNAP3B-208ENST00000484254 ACSBG1Q96GR2 724 aa30.08■■■□□ 2.41
CNTNAP3B-208ENST00000484254 IGSF1Q8N6C5 1336 aa30.07■■■□□ 2.4
CNTNAP3B-208ENST00000484254 MTHFSP49914 203 aa30.07■■■□□ 2.4
CNTNAP3B-208ENST00000484254 CNGB1Q14028 1251 aaPredicted RBP30.06■■■□□ 2.4
CNTNAP3B-208ENST00000484254 RGPD3A6NKT7 1758 aaPredicted RBP30.05■■■□□ 2.4
CNTNAP3B-208ENST00000484254 RGPD4Q7Z3J3 1758 aa30.05■■■□□ 2.4
CNTNAP3B-208ENST00000484254 RREB1Q92766 1687 aa30.04■■■□□ 2.4
CNTNAP3B-208ENST00000484254 PCDH11XQ9BZA7 1347 aa30.04■■■□□ 2.4
CNTNAP3B-208ENST00000484254 PCDH11YQ9BZA8 1340 aa30.04■■■□□ 2.4
CNTNAP3B-208ENST00000484254 PKD1L3Q7Z443 1732 aa30.03■■■□□ 2.4
CNTNAP3B-208ENST00000484254 IL13P35225 146 aa30.02■■■□□ 2.4
CNTNAP3B-208ENST00000484254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.01■■■□□ 2.39
CNTNAP3B-208ENST00000484254 SPG7Q9UQ90 795 aa30■■■□□ 2.39
CNTNAP3B-208ENST00000484254 NUP188Q5SRE5 1749 aa29.99■■■□□ 2.39
CNTNAP3B-208ENST00000484254 PLEKHG2Q9H7P9 1386 aa29.99■■■□□ 2.39
CNTNAP3B-208ENST00000484254 CYP27B1O15528 508 aa29.98■■■□□ 2.39
CNTNAP3B-208ENST00000484254 KAT6BQ8WYB5 2073 aa29.98■■■□□ 2.39
CNTNAP3B-208ENST00000484254 DOT1LQ8TEK3 1739 aa29.97■■■□□ 2.39
CNTNAP3B-208ENST00000484254 BTAF1O14981 1849 aa29.97■■■□□ 2.39
CNTNAP3B-208ENST00000484254 PRIM1P49642 420 aaKnown RBP29.96■■■□□ 2.39
CNTNAP3B-208ENST00000484254 PROM2Q8N271 834 aa29.95■■■□□ 2.39
CNTNAP3B-208ENST00000484254 SYTL4Q96C24 671 aaPredicted RBP29.94■■■□□ 2.38
CNTNAP3B-208ENST00000484254 AEBP1Q8IUX7 1158 aa29.93■■■□□ 2.38
CNTNAP3B-208ENST00000484254 KDRP35968 1356 aa29.92■■■□□ 2.38
CNTNAP3B-208ENST00000484254 PSDA5PKW4 1024 aaPredicted RBP29.92■■■□□ 2.38
CNTNAP3B-208ENST00000484254 DIAPH1O60610 1272 aaKnown RBP29.92■■■□□ 2.38
CNTNAP3B-208ENST00000484254 TXNRD1Q16881 649 aa29.92■■■□□ 2.38
CNTNAP3B-208ENST00000484254 NBPF14Q5TI25 921 aa29.92■■■□□ 2.38
CNTNAP3B-208ENST00000484254 SULT6B1Q6IMI4 303 aa29.92■■■□□ 2.38
CNTNAP3B-208ENST00000484254 NKX1-1Q15270 411 aaPredicted RBP29.91■■■□□ 2.38
CNTNAP3B-208ENST00000484254 R3HDM1Q15032 1099 aaKnown RBP29.9■■■□□ 2.38
CNTNAP3B-208ENST00000484254 COL3A1P02461 1466 aaPredicted RBP29.9■■■□□ 2.38
CNTNAP3B-208ENST00000484254 PLEKHO1Q53GL0 409 aaPredicted RBP29.89■■■□□ 2.38
CNTNAP3B-208ENST00000484254 IFNL2Q8IZJ0 200 aa29.89■■■□□ 2.38
CNTNAP3B-208ENST00000484254 PHKG2P15735 406 aa29.88■■■□□ 2.37
CNTNAP3B-208ENST00000484254 PPP2R1AP30153 589 aa29.88■■■□□ 2.37
CNTNAP3B-208ENST00000484254 AMOTQ4VCS5 1084 aa29.87■■■□□ 2.37
CNTNAP3B-208ENST00000484254 TOGARAM1Q9Y4F4 1720 aa29.85■■■□□ 2.37
CNTNAP3B-208ENST00000484254 DDX10Q13206 875 aaKnown RBP29.85■■■□□ 2.37
CNTNAP3B-208ENST00000484254 CFAP53Q96M91 514 aa29.84■■■□□ 2.37
CNTNAP3B-208ENST00000484254 HMOX1P09601 288 aa29.82■■■□□ 2.36
CNTNAP3B-208ENST00000484254 ITGB4P16144 1822 aa29.81■■■□□ 2.36
CNTNAP3B-208ENST00000484254 ZNF530Q6P9A1 599 aaPredicted RBP29.81■■■□□ 2.36
CNTNAP3B-208ENST00000484254 MPRIPQ6WCQ1 1025 aa29.81■■■□□ 2.36
CNTNAP3B-208ENST00000484254 ANO8Q9HCE9 1232 aaPredicted RBP29.81■■■□□ 2.36
CNTNAP3B-208ENST00000484254 HSP90AB1P08238 724 aaKnown RBP29.79■■■□□ 2.36
CNTNAP3B-208ENST00000484254 SLC27A3Q5K4L6 730 aa29.79■■■□□ 2.36
CNTNAP3B-208ENST00000484254 U2SURPO15042 1029 aaKnown RBP29.78■■■□□ 2.36
CNTNAP3B-208ENST00000484254 LRRC4BQ9NT99 713 aa29.78■■■□□ 2.36
CNTNAP3B-208ENST00000484254 LY75O60449 1722 aa29.78■■■□□ 2.36
CNTNAP3B-208ENST00000484254 PAPPAQ13219 1627 aa29.76■■■□□ 2.35
CNTNAP3B-208ENST00000484254 C1orf141Q5JVX7 400 aa29.76■■■□□ 2.35
CNTNAP3B-208ENST00000484254 PIGBQ92521 554 aa29.76■■■□□ 2.35
CNTNAP3B-208ENST00000484254 DCAF5Q96JK2 942 aa29.76■■■□□ 2.35
CNTNAP3B-208ENST00000484254 STK32BQ9NY57 414 aa29.76■■■□□ 2.35
CNTNAP3B-208ENST00000484254 SLC15A2Q16348 729 aa29.74■■■□□ 2.35
CNTNAP3B-208ENST00000484254 TMOD3Q9NYL9 352 aa29.74■■■□□ 2.35
CNTNAP3B-208ENST00000484254 ERVV-2B6SEH9 535 aa29.73■■■□□ 2.35
CNTNAP3B-208ENST00000484254 NUDCQ9Y266 331 aa29.73■■■□□ 2.35
CNTNAP3B-208ENST00000484254 SMARCC1Q92922 1105 aaPredicted RBP29.72■■■□□ 2.35
CNTNAP3B-208ENST00000484254 KDM6AO15550 1401 aaPredicted RBP29.71■■■□□ 2.35
CNTNAP3B-208ENST00000484254 RALBP1Q15311 655 aa29.71■■■□□ 2.35
CNTNAP3B-208ENST00000484254 CCNL1Q9UK58 526 aaPredicted RBP29.71■■■□□ 2.35
CNTNAP3B-208ENST00000484254 PALLDQ8WX93 1383 aa29.71■■■□□ 2.35
CNTNAP3B-208ENST00000484254 KCNQ4P56696 695 aa29.7■■■□□ 2.35
CNTNAP3B-208ENST00000484254 AKAP4Q5JQC9 854 aa29.7■■■□□ 2.35
CNTNAP3B-208ENST00000484254 LRP5O75197 1615 aa29.69■■■□□ 2.34
CNTNAP3B-208ENST00000484254 MTHFSDQ2M296 383 aaKnown RBP29.68■■■□□ 2.34
CNTNAP3B-208ENST00000484254 ZNF827Q17R98 1081 aa29.66■■■□□ 2.34
CNTNAP3B-208ENST00000484254 AKT1S1Q96B36 256 aa29.66■■■□□ 2.34
CNTNAP3B-208ENST00000484254 SRCAPQ6ZRS2 3230 aa29.65■■■□□ 2.34
CNTNAP3B-208ENST00000484254 U2AF1L5P0DN76 240 aaPredicted RBP29.65■■■□□ 2.34
CNTNAP3B-208ENST00000484254 CABP4P57796 275 aa29.65■■■□□ 2.34
CNTNAP3B-208ENST00000484254 U2AF1Q01081 240 aaKnown RBP eCLIP29.65■■■□□ 2.34
CNTNAP3B-208ENST00000484254 RSPH6AQ9H0K4 717 aa29.65■■■□□ 2.34
CNTNAP3B-208ENST00000484254 ASAP1Q9ULH1 1129 aa29.65■■■□□ 2.34
CNTNAP3B-208ENST00000484254 CASZ1Q86V15 1759 aa29.64■■■□□ 2.34
CNTNAP3B-208ENST00000484254 SCN11AQ9UI33 1791 aa29.63■■■□□ 2.33
CNTNAP3B-208ENST00000484254 ATG3Q9NT62 314 aa29.63■■■□□ 2.33
CNTNAP3B-208ENST00000484254 HMGB2P26583 209 aaKnown RBP29.62■■■□□ 2.33
CNTNAP3B-208ENST00000484254 PRKAR2BP31323 418 aa29.62■■■□□ 2.33
CNTNAP3B-208ENST00000484254 PDGFDQ9GZP0 370 aaPredicted RBP29.62■■■□□ 2.33
CNTNAP3B-208ENST00000484254 FCHSD2O94868 740 aa29.6■■■□□ 2.33
CNTNAP3B-208ENST00000484254 GAS2L2Q8NHY3 880 aa29.6■■■□□ 2.33
CNTNAP3B-208ENST00000484254 C5P01031 1676 aa29.6■■■□□ 2.33
CNTNAP3B-208ENST00000484254 LOC102724428A0A0B4J2F2 783 aa29.59■■■□□ 2.33
CNTNAP3B-208ENST00000484254 ZNF316A6NFI3 1004 aaPredicted RBP29.59■■■□□ 2.33
CNTNAP3B-208ENST00000484254 SIK1P57059 783 aa29.59■■■□□ 2.33
CNTNAP3B-208ENST00000484254 NFATC2IPQ8NCF5 419 aa29.59■■■□□ 2.33
CNTNAP3B-208ENST00000484254 LGR6Q9HBX8 967 aa29.59■■■□□ 2.33
CNTNAP3B-208ENST00000484254 RNMTO43148 476 aaKnown RBP29.58■■■□□ 2.33
CNTNAP3B-208ENST00000484254 PHACTR3Q96KR7 559 aa29.58■■■□□ 2.33
CNTNAP3B-208ENST00000484254 MYBBP1AQ9BQG0 1328 aaKnown RBP29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms