RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 SKAP1Q86WV1 359 aa9.37□□□□□ -0.91
SHROOM3-206ENST00000484236 ANKLE2Q86XL3 938 aa9.37□□□□□ -0.91
SHROOM3-206ENST00000484236 MRPL50Q8N5N7 158 aaKnown RBP9.37□□□□□ -0.91
SHROOM3-206ENST00000484236 NGDNQ8NEJ9 315 aaKnown RBP9.37□□□□□ -0.91
SHROOM3-206ENST00000484236 ZBTB40Q9NUA8 1239 aa9.37□□□□□ -0.91
SHROOM3-206ENST00000484236 KDRP35968 1356 aa9.37□□□□□ -0.91
SHROOM3-206ENST00000484236 KIAA0232Q92628 1395 aa9.37□□□□□ -0.91
SHROOM3-206ENST00000484236 CD44P16070 742 aaKnown RBP9.36□□□□□ -0.91
SHROOM3-206ENST00000484236 SULT6B1Q6IMI4 303 aa9.36□□□□□ -0.91
SHROOM3-206ENST00000484236 ITPRIPQ8IWB1 547 aa9.36□□□□□ -0.91
SHROOM3-206ENST00000484236 SMC5Q8IY18 1101 aa9.36□□□□□ -0.91
SHROOM3-206ENST00000484236 TMEM57Q8N5G2 664 aa9.36□□□□□ -0.91
SHROOM3-206ENST00000484236 API5Q9BZZ5 524 aaKnown RBP9.36□□□□□ -0.91
SHROOM3-206ENST00000484236 MBIPQ9NS73 344 aa9.36□□□□□ -0.91
SHROOM3-206ENST00000484236 PDZRN3Q9UPQ7 1066 aa9.36□□□□□ -0.91
SHROOM3-206ENST00000484236 MARF1Q9Y4F3 1742 aaKnown RBP9.36□□□□□ -0.91
SHROOM3-206ENST00000484236 TWISTNBQ3B726 338 aaPredicted RBP9.35□□□□□ -0.91
SHROOM3-206ENST00000484236 POTEGQ6S5H5 508 aa9.35□□□□□ -0.91
SHROOM3-206ENST00000484236 OTUD5Q96G74 571 aa9.35□□□□□ -0.91
SHROOM3-206ENST00000484236 LAS1LQ9Y4W2 734 aaKnown RBP9.35□□□□□ -0.91
SHROOM3-206ENST00000484236 ABCC4O15439 1325 aa9.34□□□□□ -0.91
SHROOM3-206ENST00000484236 MAP3K19Q56UN5 1328 aa9.34□□□□□ -0.91
SHROOM3-206ENST00000484236 CHL1O00533 1208 aa9.34□□□□□ -0.91
SHROOM3-206ENST00000484236 HTATSF1O43719 755 aaKnown RBP9.34□□□□□ -0.91
SHROOM3-206ENST00000484236 KCNA6P17658 529 aa9.34□□□□□ -0.91
SHROOM3-206ENST00000484236 HSP90AB2PQ58FF8 381 aa9.34□□□□□ -0.91
SHROOM3-206ENST00000484236 RTL1A6NKG5 1358 aa9.34□□□□□ -0.91
SHROOM3-206ENST00000484236 IGSF1Q8N6C5 1336 aa9.33□□□□□ -0.92
SHROOM3-206ENST00000484236 NUTM2FA1L443 756 aa9.33□□□□□ -0.92
SHROOM3-206ENST00000484236 GAS2L2Q8NHY3 880 aa9.33□□□□□ -0.92
SHROOM3-206ENST00000484236 THUMPD2Q9BTF0 503 aaKnown RBP9.33□□□□□ -0.92
SHROOM3-206ENST00000484236 FOXD4L1Q9NU39 408 aa9.33□□□□□ -0.92
SHROOM3-206ENST00000484236 USP35Q9P2H5 1018 aa9.33□□□□□ -0.92
SHROOM3-206ENST00000484236 DAXXQ9UER7 740 aaPredicted RBP9.33□□□□□ -0.92
SHROOM3-206ENST00000484236 CACNA1FO60840 1977 aa9.33□□□□□ -0.92
SHROOM3-206ENST00000484236 SOS1Q07889 1333 aaPredicted RBP9.32□□□□□ -0.92
SHROOM3-206ENST00000484236 ADGRL3Q9HAR2 1447 aa9.32□□□□□ -0.92
SHROOM3-206ENST00000484236 PHRF1Q9P1Y6 1649 aaKnown RBP9.32□□□□□ -0.92
SHROOM3-206ENST00000484236 ZBTB7BO15156 539 aaPredicted RBP9.32□□□□□ -0.92
SHROOM3-206ENST00000484236 PRR29P0C7W0 189 aa9.32□□□□□ -0.92
SHROOM3-206ENST00000484236 AMPHP49418 695 aa9.32□□□□□ -0.92
SHROOM3-206ENST00000484236 AEBP1Q8IUX7 1158 aa9.32□□□□□ -0.92
SHROOM3-206ENST00000484236 C8orf58Q8NAV2 365 aa9.32□□□□□ -0.92
SHROOM3-206ENST00000484236 GCC1Q96CN9 775 aa9.32□□□□□ -0.92
SHROOM3-206ENST00000484236 UPF2Q9HAU5 1272 aaKnown RBP9.32□□□□□ -0.92
SHROOM3-206ENST00000484236 PTPRCP08575 1304 aa9.31□□□□□ -0.92
SHROOM3-206ENST00000484236 CRB1P82279 1406 aa9.31□□□□□ -0.92
SHROOM3-206ENST00000484236 LRRC37A3O60309 1634 aa9.31□□□□□ -0.92
SHROOM3-206ENST00000484236 NLRP6P59044 892 aa9.31□□□□□ -0.92
SHROOM3-206ENST00000484236 TSPYL6Q8N831 410 aa9.31□□□□□ -0.92
SHROOM3-206ENST00000484236 BABAM1Q9NWV8 329 aa9.31□□□□□ -0.92
SHROOM3-206ENST00000484236 PHF8Q9UPP1 1060 aa9.31□□□□□ -0.92
SHROOM3-206ENST00000484236 NWD1Q149M9 1564 aa9.31□□□□□ -0.92
SHROOM3-206ENST00000484236 LTN1O94822 1766 aa9.31□□□□□ -0.92
SHROOM3-206ENST00000484236 FAM83GA6ND36 823 aa9.3□□□□□ -0.92
SHROOM3-206ENST00000484236 CLCN6P51797 869 aa9.3□□□□□ -0.92
SHROOM3-206ENST00000484236 NUCB1Q02818 461 aa9.3□□□□□ -0.92
SHROOM3-206ENST00000484236 INTS3Q68E01 1043 aaKnown RBP9.3□□□□□ -0.92
SHROOM3-206ENST00000484236 RTF1Q92541 710 aaKnown RBP9.3□□□□□ -0.92
SHROOM3-206ENST00000484236 NPHP4O75161 1426 aaPredicted RBP9.3□□□□□ -0.92
SHROOM3-206ENST00000484236 USP19O94966 1318 aa9.3□□□□□ -0.92
SHROOM3-206ENST00000484236 EIF5BO60841 1220 aaKnown RBP9.29□□□□□ -0.92
SHROOM3-206ENST00000484236 HOXC9P31274 260 aa9.29□□□□□ -0.92
SHROOM3-206ENST00000484236 BECN1Q14457 450 aa9.29□□□□□ -0.92
SHROOM3-206ENST00000484236 RTL5Q5HYW3 569 aaPredicted RBP9.29□□□□□ -0.92
SHROOM3-206ENST00000484236 ABTB2Q8N961 1025 aa9.29□□□□□ -0.92
SHROOM3-206ENST00000484236 EYA1Q99502 592 aa9.29□□□□□ -0.92
SHROOM3-206ENST00000484236 DCTN1Q14203 1278 aa9.28□□□□□ -0.92
SHROOM3-206ENST00000484236 MTHFSDQ2M296 383 aaKnown RBP9.28□□□□□ -0.92
SHROOM3-206ENST00000484236 NFAT5O94916 1531 aa9.27□□□□□ -0.93
SHROOM3-206ENST00000484236 KIF1AQ12756 1690 aa9.27□□□□□ -0.93
SHROOM3-206ENST00000484236 ELL2O00472 640 aaPredicted RBP9.27□□□□□ -0.93
SHROOM3-206ENST00000484236 MCM10Q7L590 875 aa9.27□□□□□ -0.93
SHROOM3-206ENST00000484236 CHD1LQ86WJ1 897 aa9.27□□□□□ -0.93
SHROOM3-206ENST00000484236 KCNH5Q8NCM2 988 aa9.27□□□□□ -0.93
SHROOM3-206ENST00000484236 TBC1D32Q96NH3 1257 aa9.27□□□□□ -0.93
SHROOM3-206ENST00000484236 SSUH2Q9Y2M2 353 aa9.27□□□□□ -0.93
SHROOM3-206ENST00000484236 N4BP2Q86UW6 1770 aaPredicted RBP9.27□□□□□ -0.93
SHROOM3-206ENST00000484236 RGS12O14924 1447 aa9.26□□□□□ -0.93
SHROOM3-206ENST00000484236 GNAT3A8MTJ3 354 aa9.26□□□□□ -0.93
SHROOM3-206ENST00000484236 POTEB2H3BUK9 544 aa9.26□□□□□ -0.93
SHROOM3-206ENST00000484236 SOX12O15370 315 aa9.26□□□□□ -0.93
SHROOM3-206ENST00000484236 RPAP2Q8IXW5 612 aaPredicted RBP9.26□□□□□ -0.93
SHROOM3-206ENST00000484236 IP6K1Q92551 441 aa9.26□□□□□ -0.93
SHROOM3-206ENST00000484236 CHMP4AQ9BY43 222 aa9.26□□□□□ -0.93
SHROOM3-206ENST00000484236 TSPYL4Q9UJ04 414 aa9.26□□□□□ -0.93
SHROOM3-206ENST00000484236 SLIT3O75094 1523 aa9.26□□□□□ -0.93
SHROOM3-206ENST00000484236 MAP3K5Q99683 1374 aa9.25□□□□□ -0.93
SHROOM3-206ENST00000484236 MST1RQ04912 1400 aa9.25□□□□□ -0.93
SHROOM3-206ENST00000484236 SEC24BO95487 1268 aa9.25□□□□□ -0.93
SHROOM3-206ENST00000484236 BMP2KLQ5H9B9 411 aa9.25□□□□□ -0.93
SHROOM3-206ENST00000484236 FAM208AQ9UK61 1670 aaKnown RBP9.25□□□□□ -0.93
SHROOM3-206ENST00000484236 CCT4P50991 539 aaKnown RBP9.24□□□□□ -0.93
SHROOM3-206ENST00000484236 PSME1Q06323 249 aa9.24□□□□□ -0.93
SHROOM3-206ENST00000484236 NBR1Q14596 966 aa9.24□□□□□ -0.93
SHROOM3-206ENST00000484236 ANKRD44Q8N8A2 993 aa9.24□□□□□ -0.93
SHROOM3-206ENST00000484236 DCTPP1Q9H773 170 aa9.24□□□□□ -0.93
SHROOM3-206ENST00000484236 FARP1Q9Y4F1 1045 aaPredicted RBP9.24□□□□□ -0.93
SHROOM3-206ENST00000484236 LMO7Q8WWI1 1683 aa9.23□□□□□ -0.93
SHROOM3-206ENST00000484236 LMTK3Q96Q04 1460 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms