RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 GIGYF1O75420 1035 aaPredicted RBP12.37□□□□□ -0.43
RTFDC1-208ENST00000484084 TOGARAM1Q9Y4F4 1720 aa12.37□□□□□ -0.43
RTFDC1-208ENST00000484084 MAP3K19Q56UN5 1328 aa12.37□□□□□ -0.43
RTFDC1-208ENST00000484084 AMIGO3Q86WK7 504 aa12.36□□□□□ -0.43
RTFDC1-208ENST00000484084 TFCP2L1Q9NZI6 479 aa12.36□□□□□ -0.43
RTFDC1-208ENST00000484084 C5P01031 1676 aa12.35□□□□□ -0.43
RTFDC1-208ENST00000484084 ADCY9O60503 1353 aa12.35□□□□□ -0.43
RTFDC1-208ENST00000484084 KAT6BQ8WYB5 2073 aa12.35□□□□□ -0.43
RTFDC1-208ENST00000484084 POLD1P28340 1107 aa12.35□□□□□ -0.43
RTFDC1-208ENST00000484084 HOXC9P31274 260 aa12.35□□□□□ -0.43
RTFDC1-208ENST00000484084 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
RTFDC1-208ENST00000484084 TAF1LQ8IZX4 1826 aa12.34□□□□□ -0.43
RTFDC1-208ENST00000484084 LTV1Q96GA3 475 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-208ENST00000484084 ATP10DQ9P241 1426 aa12.34□□□□□ -0.43
RTFDC1-208ENST00000484084 NEUROD1Q13562 356 aa12.33□□□□□ -0.44
RTFDC1-208ENST00000484084 NBPF6Q5VWK0 638 aa12.33□□□□□ -0.44
RTFDC1-208ENST00000484084 PELP1Q8IZL8 1130 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-208ENST00000484084 TMC1Q8TDI8 760 aa12.33□□□□□ -0.44
RTFDC1-208ENST00000484084 SYTL4Q96C24 671 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-208ENST00000484084 NBPF4Q96M43 638 aa12.33□□□□□ -0.44
RTFDC1-208ENST00000484084 PUS7Q96PZ0 661 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-208ENST00000484084 TESK2Q96S53 571 aa12.33□□□□□ -0.44
RTFDC1-208ENST00000484084 CCNL1Q9UK58 526 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-208ENST00000484084 HDGFL2Q7Z4V5 671 aaPredicted RBP12.32□□□□□ -0.44
RTFDC1-208ENST00000484084 ZCRB1Q8TBF4 217 aaKnown RBP12.32□□□□□ -0.44
RTFDC1-208ENST00000484084 GRIN3BO60391 1043 aa12.31□□□□□ -0.44
RTFDC1-208ENST00000484084 MSL1Q68DK7 614 aa12.31□□□□□ -0.44
RTFDC1-208ENST00000484084 SMIM5Q71RC9 77 aa12.3□□□□□ -0.44
RTFDC1-208ENST00000484084 CARD11Q9BXL7 1154 aa12.3□□□□□ -0.44
RTFDC1-208ENST00000484084 TERF2IPQ9NYB0 399 aa12.3□□□□□ -0.44
RTFDC1-208ENST00000484084 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-208ENST00000484084 C4BP0C0L5 1744 aa12.29□□□□□ -0.44
RTFDC1-208ENST00000484084 USHBP1Q8N6Y0 703 aa12.29□□□□□ -0.44
RTFDC1-208ENST00000484084 CD2APQ9Y5K6 639 aa12.29□□□□□ -0.44
RTFDC1-208ENST00000484084 UBR3Q6ZT12 1888 aa12.29□□□□□ -0.44
RTFDC1-208ENST00000484084 ITGB4P16144 1822 aa12.28□□□□□ -0.44
RTFDC1-208ENST00000484084 USP47Q96K76 1375 aa12.28□□□□□ -0.44
RTFDC1-208ENST00000484084 KIAA1551Q9HCM1 1747 aa12.28□□□□□ -0.44
RTFDC1-208ENST00000484084 FYB1O15117 783 aa12.27□□□□□ -0.45
RTFDC1-208ENST00000484084 CYP27B1O15528 508 aa12.27□□□□□ -0.45
RTFDC1-208ENST00000484084 RRS1Q15050 365 aaKnown RBP12.27□□□□□ -0.45
RTFDC1-208ENST00000484084 RTL1A6NKG5 1358 aa12.27□□□□□ -0.45
RTFDC1-208ENST00000484084 PKD1L3Q7Z443 1732 aa12.26□□□□□ -0.45
RTFDC1-208ENST00000484084 COG3Q96JB2 828 aa12.26□□□□□ -0.45
RTFDC1-208ENST00000484084 PALLDQ8WX93 1383 aa12.26□□□□□ -0.45
RTFDC1-208ENST00000484084 CICQ96RK0 1608 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-208ENST00000484084 KIF3CO14782 793 aa12.25□□□□□ -0.45
RTFDC1-208ENST00000484084 MSH5O43196 834 aa12.25□□□□□ -0.45
RTFDC1-208ENST00000484084 HSPA6P17066 643 aa12.25□□□□□ -0.45
RTFDC1-208ENST00000484084 AMPHP49418 695 aa12.25□□□□□ -0.45
RTFDC1-208ENST00000484084 HSP90AB2PQ58FF8 381 aa12.25□□□□□ -0.45
RTFDC1-208ENST00000484084 CGNL1Q0VF96 1302 aa12.25□□□□□ -0.45
RTFDC1-208ENST00000484084 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
RTFDC1-208ENST00000484084 ST20-MTHFSA0A0A6YYL1 179 aa12.24□□□□□ -0.45
RTFDC1-208ENST00000484084 INSRP06213 1382 aa12.23□□□□□ -0.45
RTFDC1-208ENST00000484084 MPRIPQ6WCQ1 1025 aa12.23□□□□□ -0.45
RTFDC1-208ENST00000484084 PIGBQ92521 554 aa12.23□□□□□ -0.45
RTFDC1-208ENST00000484084 GGNBP2Q9H3C7 697 aa12.23□□□□□ -0.45
RTFDC1-208ENST00000484084 GPBP1L1Q9HC44 474 aaPredicted RBP12.23□□□□□ -0.45
RTFDC1-208ENST00000484084 KIF13BQ9NQT8 1826 aa12.23□□□□□ -0.45
RTFDC1-208ENST00000484084 IGSF1Q8N6C5 1336 aa12.22□□□□□ -0.45
RTFDC1-208ENST00000484084 NKX1-1Q15270 411 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-208ENST00000484084 LINC00116Q8NCU8 138 aa12.22□□□□□ -0.45
RTFDC1-208ENST00000484084 ZNF526Q8TF50 670 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-208ENST00000484084 WWC3Q9ULE0 1092 aa12.22□□□□□ -0.45
RTFDC1-208ENST00000484084 PCDH11XQ9BZA7 1347 aa12.21□□□□□ -0.45
RTFDC1-208ENST00000484084 PCDH11YQ9BZA8 1340 aa12.21□□□□□ -0.45
RTFDC1-208ENST00000484084 ANKRD26Q9UPS8 1709 aa12.21□□□□□ -0.45
RTFDC1-208ENST00000484084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.21□□□□□ -0.45
RTFDC1-208ENST00000484084 DNAJC5GQ8N7S2 189 aa12.21□□□□□ -0.45
RTFDC1-208ENST00000484084 FLAD1Q8NFF5 587 aa12.21□□□□□ -0.45
RTFDC1-208ENST00000484084 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
RTFDC1-208ENST00000484084 ITPK1Q13572 414 aa12.2□□□□□ -0.46
RTFDC1-208ENST00000484084 RAPGEF4Q8WZA2 1011 aa12.2□□□□□ -0.46
RTFDC1-208ENST00000484084 CARD14Q9BXL6 1004 aa12.2□□□□□ -0.46
RTFDC1-208ENST00000484084 KIF20BQ96Q89 1820 aa12.2□□□□□ -0.46
RTFDC1-208ENST00000484084 PXDNLA1KZ92 1463 aa12.2□□□□□ -0.46
RTFDC1-208ENST00000484084 NSD3Q9BZ95 1437 aa12.19□□□□□ -0.46
RTFDC1-208ENST00000484084 FLT4P35916 1363 aa12.18□□□□□ -0.46
RTFDC1-208ENST00000484084 KIF24Q5T7B8 1368 aa12.18□□□□□ -0.46
RTFDC1-208ENST00000484084 N4BP2Q86UW6 1770 aaPredicted RBP12.18□□□□□ -0.46
RTFDC1-208ENST00000484084 PHF14O94880 888 aa12.18□□□□□ -0.46
RTFDC1-208ENST00000484084 BRCA1P38398 1863 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-208ENST00000484084 LOC102724428A0A0B4J2F2 783 aa12.17□□□□□ -0.46
RTFDC1-208ENST00000484084 SSFA2P28290 1259 aa12.17□□□□□ -0.46
RTFDC1-208ENST00000484084 SIK1P57059 783 aa12.17□□□□□ -0.46
RTFDC1-208ENST00000484084 AK7Q96M32 723 aa12.17□□□□□ -0.46
RTFDC1-208ENST00000484084 SLC4A9Q96Q91 983 aa12.17□□□□□ -0.46
RTFDC1-208ENST00000484084 ASAP1Q9ULH1 1129 aa12.17□□□□□ -0.46
RTFDC1-208ENST00000484084 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
RTFDC1-208ENST00000484084 SMG6Q86US8 1419 aaKnown RBP12.17□□□□□ -0.46
RTFDC1-208ENST00000484084 SMARCC1Q92922 1105 aaPredicted RBP12.16□□□□□ -0.46
RTFDC1-208ENST00000484084 KDRP35968 1356 aa12.16□□□□□ -0.46
RTFDC1-208ENST00000484084 TONSLQ96HA7 1378 aa12.16□□□□□ -0.46
RTFDC1-208ENST00000484084 ZNF831Q5JPB2 1677 aa12.16□□□□□ -0.46
RTFDC1-208ENST00000484084 COL5A3P25940 1745 aaPredicted RBP12.15□□□□□ -0.46
RTFDC1-208ENST00000484084 ATG3Q9NT62 314 aa12.15□□□□□ -0.46
RTFDC1-208ENST00000484084 C10orf71Q711Q0 1435 aa12.14□□□□□ -0.47
RTFDC1-208ENST00000484084 MMP10P09238 476 aa12.14□□□□□ -0.47
RTFDC1-208ENST00000484084 KCNA3P22001 575 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms