RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 IL13P35225 146 aa21.05■□□□□ 0.96
RPP40-206ENST00000483546 ZCRB1Q8TBF4 217 aaKnown RBP21.05■□□□□ 0.96
RPP40-206ENST00000483546 CFAP53Q96M91 514 aa21.05■□□□□ 0.96
RPP40-206ENST00000483546 DIAPH1O60610 1272 aaKnown RBP21.04■□□□□ 0.96
RPP40-206ENST00000483546 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
RPP40-206ENST00000483546 RALBP1Q15311 655 aa21.04■□□□□ 0.96
RPP40-206ENST00000483546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.04■□□□□ 0.96
RPP40-206ENST00000483546 COL3A1P02461 1466 aaPredicted RBP21.04■□□□□ 0.96
RPP40-206ENST00000483546 KDRP35968 1356 aa21.02■□□□□ 0.96
RPP40-206ENST00000483546 PCDH11XQ9BZA7 1347 aa21.02■□□□□ 0.95
RPP40-206ENST00000483546 PCDH11YQ9BZA8 1340 aa21.02■□□□□ 0.95
RPP40-206ENST00000483546 NHSQ6T4R5 1651 aa21.01■□□□□ 0.95
RPP40-206ENST00000483546 TRIM37O94972 964 aa21■□□□□ 0.95
RPP40-206ENST00000483546 BAG6P46379 1132 aa21■□□□□ 0.95
RPP40-206ENST00000483546 SPG7Q9UQ90 795 aa21■□□□□ 0.95
RPP40-206ENST00000483546 RGPD3A6NKT7 1758 aaPredicted RBP20.98■□□□□ 0.95
RPP40-206ENST00000483546 RGPD4Q7Z3J3 1758 aa20.98■□□□□ 0.95
RPP40-206ENST00000483546 DDX54Q8TDD1 881 aaKnown RBP20.98■□□□□ 0.95
RPP40-206ENST00000483546 BCL11BQ9C0K0 894 aaPredicted RBP20.98■□□□□ 0.95
RPP40-206ENST00000483546 KAT6BQ8WYB5 2073 aa20.98■□□□□ 0.95
RPP40-206ENST00000483546 AMOTQ4VCS5 1084 aa20.96■□□□□ 0.95
RPP40-206ENST00000483546 SULT6B1Q6IMI4 303 aa20.96■□□□□ 0.95
RPP40-206ENST00000483546 NUDCQ9Y266 331 aa20.96■□□□□ 0.95
RPP40-206ENST00000483546 DOT1LQ8TEK3 1739 aa20.95■□□□□ 0.94
RPP40-206ENST00000483546 PLEKHO1Q53GL0 409 aaPredicted RBP20.94■□□□□ 0.94
RPP40-206ENST00000483546 MYBBP1AQ9BQG0 1328 aaKnown RBP20.94■□□□□ 0.94
RPP40-206ENST00000483546 APBA3O96018 575 aa20.93■□□□□ 0.94
RPP40-206ENST00000483546 AEBP1Q8IUX7 1158 aa20.93■□□□□ 0.94
RPP40-206ENST00000483546 CYP27B1O15528 508 aa20.92■□□□□ 0.94
RPP40-206ENST00000483546 NKX1-1Q15270 411 aaPredicted RBP20.92■□□□□ 0.94
RPP40-206ENST00000483546 IFNL2Q8IZJ0 200 aa20.92■□□□□ 0.94
RPP40-206ENST00000483546 BTAF1O14981 1849 aa20.91■□□□□ 0.94
RPP40-206ENST00000483546 U2SURPO15042 1029 aaKnown RBP20.91■□□□□ 0.94
RPP40-206ENST00000483546 DEFB132Q7Z7B7 95 aa20.91■□□□□ 0.94
RPP40-206ENST00000483546 PRKRIP1Q9H875 184 aaPredicted RBP20.91■□□□□ 0.94
RPP40-206ENST00000483546 PLSCR1O15162 318 aa20.9■□□□□ 0.94
RPP40-206ENST00000483546 RREB1Q92766 1687 aa20.89■□□□□ 0.94
RPP40-206ENST00000483546 HSP90AB1P08238 724 aaKnown RBP20.89■□□□□ 0.93
RPP40-206ENST00000483546 PHKG2P15735 406 aa20.89■□□□□ 0.93
RPP40-206ENST00000483546 HMOX1P09601 288 aa20.88■□□□□ 0.93
RPP40-206ENST00000483546 EN1Q05925 392 aaPredicted RBP20.88■□□□□ 0.93
RPP40-206ENST00000483546 ACSBG1Q96GR2 724 aa20.88■□□□□ 0.93
RPP40-206ENST00000483546 CAMKK2Q96RR4 588 aa20.88■□□□□ 0.93
RPP40-206ENST00000483546 ITGB4P16144 1822 aa20.88■□□□□ 0.93
RPP40-206ENST00000483546 TOGARAM1Q9Y4F4 1720 aa20.87■□□□□ 0.93
RPP40-206ENST00000483546 KCNQ2O43526 872 aa20.87■□□□□ 0.93
RPP40-206ENST00000483546 C1orf141Q5JVX7 400 aa20.86■□□□□ 0.93
RPP40-206ENST00000483546 ZNF530Q6P9A1 599 aaPredicted RBP20.86■□□□□ 0.93
RPP40-206ENST00000483546 FCHSD2O94868 740 aa20.85■□□□□ 0.93
RPP40-206ENST00000483546 U2AF1L5P0DN76 240 aaPredicted RBP20.84■□□□□ 0.93
RPP40-206ENST00000483546 PRIM1P49642 420 aaKnown RBP20.84■□□□□ 0.93
RPP40-206ENST00000483546 U2AF1Q01081 240 aaKnown RBP eCLIP20.84■□□□□ 0.93
RPP40-206ENST00000483546 PTF1AQ7RTS3 328 aa20.84■□□□□ 0.93
RPP40-206ENST00000483546 DCAF5Q96JK2 942 aa20.84■□□□□ 0.93
RPP40-206ENST00000483546 EZH2Q15910 746 aaKnown RBP20.83■□□□□ 0.93
RPP40-206ENST00000483546 SYTL4Q96C24 671 aaPredicted RBP20.83■□□□□ 0.93
RPP40-206ENST00000483546 RSPH6AQ9H0K4 717 aa20.83■□□□□ 0.93
RPP40-206ENST00000483546 NUP188Q5SRE5 1749 aa20.83■□□□□ 0.92
RPP40-206ENST00000483546 SCN11AQ9UI33 1791 aa20.82■□□□□ 0.92
RPP40-206ENST00000483546 AKAP4Q5JQC9 854 aa20.82■□□□□ 0.92
RPP40-206ENST00000483546 VIRMAQ69YN4 1812 aaKnown RBP20.81■□□□□ 0.92
RPP40-206ENST00000483546 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
RPP40-206ENST00000483546 GAS2L2Q8NHY3 880 aa20.81■□□□□ 0.92
RPP40-206ENST00000483546 PNNQ9H307 717 aaKnown RBP20.81■□□□□ 0.92
RPP40-206ENST00000483546 LY75O60449 1722 aa20.81■□□□□ 0.92
RPP40-206ENST00000483546 PRKAR2BP31323 418 aa20.8■□□□□ 0.92
RPP40-206ENST00000483546 ANP32CO43423 234 aa20.79■□□□□ 0.92
RPP40-206ENST00000483546 HMGB2P26583 209 aaKnown RBP20.79■□□□□ 0.92
RPP40-206ENST00000483546 MTHFSDQ2M296 383 aaKnown RBP20.79■□□□□ 0.92
RPP40-206ENST00000483546 ADAMTS7Q9UKP4 1686 aa20.79■□□□□ 0.92
RPP40-206ENST00000483546 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
RPP40-206ENST00000483546 NEFMP07197 916 aa20.78■□□□□ 0.92
RPP40-206ENST00000483546 TMOD3Q9NYL9 352 aa20.78■□□□□ 0.92
RPP40-206ENST00000483546 TXNRD1Q16881 649 aa20.77■□□□□ 0.92
RPP40-206ENST00000483546 MPRIPQ6WCQ1 1025 aa20.77■□□□□ 0.92
RPP40-206ENST00000483546 SMARCC1Q92922 1105 aaPredicted RBP20.77■□□□□ 0.92
RPP40-206ENST00000483546 SLC27A3Q5K4L6 730 aa20.76■□□□□ 0.91
RPP40-206ENST00000483546 NBPF14Q5TI25 921 aa20.75■□□□□ 0.91
RPP40-206ENST00000483546 MAP3K5Q99683 1374 aa20.74■□□□□ 0.91
RPP40-206ENST00000483546 PROM2Q8N271 834 aa20.74■□□□□ 0.91
RPP40-206ENST00000483546 PIGBQ92521 554 aa20.74■□□□□ 0.91
RPP40-206ENST00000483546 MRC1P22897 1456 aa20.74■□□□□ 0.91
RPP40-206ENST00000483546 GNAT3A8MTJ3 354 aa20.73■□□□□ 0.91
RPP40-206ENST00000483546 CABP4P57796 275 aa20.73■□□□□ 0.91
RPP40-206ENST00000483546 PHACTR3Q96KR7 559 aa20.73■□□□□ 0.91
RPP40-206ENST00000483546 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
RPP40-206ENST00000483546 WDR43Q15061 677 aaKnown RBP eCLIP20.72■□□□□ 0.91
RPP40-206ENST00000483546 PAPPAQ13219 1627 aa20.71■□□□□ 0.91
RPP40-206ENST00000483546 RNMTO43148 476 aaKnown RBP20.71■□□□□ 0.91
RPP40-206ENST00000483546 MAPK8IP3Q9UPT6 1336 aa20.71■□□□□ 0.91
RPP40-206ENST00000483546 ZNF831Q5JPB2 1677 aa20.7■□□□□ 0.91
RPP40-206ENST00000483546 PLEKHF1Q96S99 279 aa20.7■□□□□ 0.9
RPP40-206ENST00000483546 DLG5Q8TDM6 1919 aa20.69■□□□□ 0.9
RPP40-206ENST00000483546 HTATSF1O43719 755 aaKnown RBP20.69■□□□□ 0.9
RPP40-206ENST00000483546 SLC52A2Q9HAB3 445 aa20.69■□□□□ 0.9
RPP40-206ENST00000483546 CCNL1Q9UK58 526 aaPredicted RBP20.68■□□□□ 0.9
RPP40-206ENST00000483546 TAF1LQ8IZX4 1826 aa20.68■□□□□ 0.9
RPP40-206ENST00000483546 C5P01031 1676 aa20.67■□□□□ 0.9
RPP40-206ENST00000483546 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
RPP40-206ENST00000483546 NFATC2IPQ8NCF5 419 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms