RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
LINC00477-201ENST00000483544 TMEM51Q9NW97 253 aa15.51■□□□□ 0.07
LINC00477-201ENST00000483544 TTC21AQ8NDW8 1320 aa15.51■□□□□ 0.07
LINC00477-201ENST00000483544 ZBTB7BO15156 539 aaPredicted RBP15.5■□□□□ 0.07
LINC00477-201ENST00000483544 KIF20AO95235 890 aa15.5■□□□□ 0.07
LINC00477-201ENST00000483544 HMOX1P09601 288 aa15.5■□□□□ 0.07
LINC00477-201ENST00000483544 ROBO2Q9HCK4 1378 aa15.5■□□□□ 0.07
LINC00477-201ENST00000483544 USP6P35125 1406 aa15.49■□□□□ 0.07
LINC00477-201ENST00000483544 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
LINC00477-201ENST00000483544 MBIPQ9NS73 344 aa15.49■□□□□ 0.07
LINC00477-201ENST00000483544 KIAA0232Q92628 1395 aa15.49■□□□□ 0.07
LINC00477-201ENST00000483544 FMN2Q9NZ56 1722 aa15.49■□□□□ 0.07
LINC00477-201ENST00000483544 ARHGAP23Q9P227 1491 aa15.49■□□□□ 0.07
LINC00477-201ENST00000483544 TWISTNBQ3B726 338 aaPredicted RBP15.48■□□□□ 0.07
LINC00477-201ENST00000483544 CHD1LQ86WJ1 897 aa15.48■□□□□ 0.07
LINC00477-201ENST00000483544 DHX37Q8IY37 1157 aaKnown RBP15.48■□□□□ 0.07
LINC00477-201ENST00000483544 PRR36Q9H6K5 1346 aa15.48■□□□□ 0.07
LINC00477-201ENST00000483544 BMP2KLQ5H9B9 411 aa15.48■□□□□ 0.07
LINC00477-201ENST00000483544 C22orf23Q9BZE7 217 aa15.48■□□□□ 0.07
LINC00477-201ENST00000483544 ANP32BQ92688 251 aaKnown RBP15.47■□□□□ 0.07
LINC00477-201ENST00000483544 EID1Q9Y6B2 187 aa15.47■□□□□ 0.07
LINC00477-201ENST00000483544 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
LINC00477-201ENST00000483544 ARHGEF10O15013 1369 aa15.46■□□□□ 0.07
LINC00477-201ENST00000483544 SSH2Q76I76 1423 aa15.46■□□□□ 0.07
LINC00477-201ENST00000483544 USP54Q70EL1 1684 aa15.46■□□□□ 0.06
LINC00477-201ENST00000483544 ANTXR1Q9H6X2 564 aa15.46■□□□□ 0.06
LINC00477-201ENST00000483544 TBX22Q9Y458 520 aa15.46■□□□□ 0.06
LINC00477-201ENST00000483544 ACEP12821 1306 aa15.45■□□□□ 0.06
LINC00477-201ENST00000483544 RBM25P49756 843 aaKnown RBP15.45■□□□□ 0.06
LINC00477-201ENST00000483544 TBC1D2Q9BYX2 928 aa15.45■□□□□ 0.06
LINC00477-201ENST00000483544 CACNA1FO60840 1977 aa15.44■□□□□ 0.06
LINC00477-201ENST00000483544 HSP90B1P14625 803 aaKnown RBP15.44■□□□□ 0.06
LINC00477-201ENST00000483544 EIF4A2Q14240 407 aaKnown RBP15.44■□□□□ 0.06
LINC00477-201ENST00000483544 PTPRCP08575 1304 aa15.43■□□□□ 0.06
LINC00477-201ENST00000483544 CHL1O00533 1208 aa15.43■□□□□ 0.06
LINC00477-201ENST00000483544 RRS1Q15050 365 aaKnown RBP15.43■□□□□ 0.06
LINC00477-201ENST00000483544 PPP4R3BQ5MIZ7 849 aa15.43■□□□□ 0.06
LINC00477-201ENST00000483544 INTS3Q68E01 1043 aaKnown RBP15.43■□□□□ 0.06
LINC00477-201ENST00000483544 SNX21Q969T3 373 aa15.43■□□□□ 0.06
LINC00477-201ENST00000483544 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
LINC00477-201ENST00000483544 ANKARQ7Z5J8 1434 aa15.43■□□□□ 0.06
LINC00477-201ENST00000483544 PEAK1Q9H792 1746 aa15.43■□□□□ 0.06
LINC00477-201ENST00000483544 FRAT2O75474 233 aaPredicted RBP15.43■□□□□ 0.06
LINC00477-201ENST00000483544 FBLN1P23142 703 aa15.43■□□□□ 0.06
LINC00477-201ENST00000483544 TSPYL6Q8N831 410 aa15.43■□□□□ 0.06
LINC00477-201ENST00000483544 GTPBP4Q9BZE4 634 aaKnown RBP15.43■□□□□ 0.06
LINC00477-201ENST00000483544 PTPRUQ92729 1446 aa15.42■□□□□ 0.06
LINC00477-201ENST00000483544 SECISBP2LQ93073 1101 aaKnown RBP15.42■□□□□ 0.06
LINC00477-201ENST00000483544 SOS1Q07889 1333 aaPredicted RBP15.41■□□□□ 0.06
LINC00477-201ENST00000483544 FSD2A1L4K1 749 aa15.41■□□□□ 0.06
LINC00477-201ENST00000483544 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
LINC00477-201ENST00000483544 CHMP5Q9NZZ3 219 aa15.41■□□□□ 0.06
LINC00477-201ENST00000483544 SBNO1A3KN83 1393 aa15.41■□□□□ 0.06
LINC00477-201ENST00000483544 XRN1Q8IZH2 1706 aaKnown RBP15.41■□□□□ 0.06
LINC00477-201ENST00000483544 HTATSF1O43719 755 aaKnown RBP15.4■□□□□ 0.06
LINC00477-201ENST00000483544 MFAP1P55081 439 aaKnown RBP15.4■□□□□ 0.06
LINC00477-201ENST00000483544 HSCBQ8IWL3 235 aa15.4■□□□□ 0.06
LINC00477-201ENST00000483544 C8orf58Q8NAV2 365 aa15.4■□□□□ 0.06
LINC00477-201ENST00000483544 ZNF830Q96NB3 372 aaPredicted RBP15.4■□□□□ 0.06
LINC00477-201ENST00000483544 THUMPD2Q9BTF0 503 aaKnown RBP15.4■□□□□ 0.06
LINC00477-201ENST00000483544 ISY1Q9ULR0 285 aaKnown RBP15.4■□□□□ 0.06
LINC00477-201ENST00000483544 FLT4P35916 1363 aa15.4■□□□□ 0.06
LINC00477-201ENST00000483544 FER1L4A9Z1Z3 1794 aa15.4■□□□□ 0.06
LINC00477-201ENST00000483544 ESPNB1AK53 854 aa15.4■□□□□ 0.06
LINC00477-201ENST00000483544 LETM1O95202 739 aaPredicted RBP15.4■□□□□ 0.06
LINC00477-201ENST00000483544 SULT6B1Q6IMI4 303 aa15.4■□□□□ 0.06
LINC00477-201ENST00000483544 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
LINC00477-201ENST00000483544 LNPKQ9C0E8 428 aa15.4■□□□□ 0.06
LINC00477-201ENST00000483544 LTKP29376 864 aa15.39■□□□□ 0.05
LINC00477-201ENST00000483544 ANKRD45Q5TZF3 282 aa15.39■□□□□ 0.05
LINC00477-201ENST00000483544 KDRP35968 1356 aa15.39■□□□□ 0.05
LINC00477-201ENST00000483544 NCKAP5LQ9HCH0 1330 aa15.38■□□□□ 0.05
LINC00477-201ENST00000483544 CIZ1Q9ULV3 898 aaPredicted RBP15.38■□□□□ 0.05
LINC00477-201ENST00000483544 NCOA3Q9Y6Q9 1424 aa15.38■□□□□ 0.05
LINC00477-201ENST00000483544 SLC20A2Q08357 652 aa15.37■□□□□ 0.05
LINC00477-201ENST00000483544 THEMISQ8N1K5 641 aaPredicted RBP15.37■□□□□ 0.05
LINC00477-201ENST00000483544 DCTPP1Q9H773 170 aa15.37■□□□□ 0.05
LINC00477-201ENST00000483544 CRB1P82279 1406 aa15.37■□□□□ 0.05
LINC00477-201ENST00000483544 GOLGA6L3A6NEY3 463 aa15.37■□□□□ 0.05
LINC00477-201ENST00000483544 GAS2L2Q8NHY3 880 aa15.37■□□□□ 0.05
LINC00477-201ENST00000483544 RTL1A6NKG5 1358 aa15.36■□□□□ 0.05
LINC00477-201ENST00000483544 TULP1O00294 542 aaPredicted RBP15.36■□□□□ 0.05
LINC00477-201ENST00000483544 ANKRD44Q8N8A2 993 aa15.36■□□□□ 0.05
LINC00477-201ENST00000483544 BABAM1Q9NWV8 329 aa15.36■□□□□ 0.05
LINC00477-201ENST00000483544 AMOTL2Q9Y2J4 779 aa15.36■□□□□ 0.05
LINC00477-201ENST00000483544 LRRC37A3O60309 1634 aa15.36■□□□□ 0.05
LINC00477-201ENST00000483544 PTMSP20962 102 aa15.35■□□□□ 0.05
LINC00477-201ENST00000483544 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
LINC00477-201ENST00000483544 SIRT2Q8IXJ6 389 aa15.35■□□□□ 0.05
LINC00477-201ENST00000483544 SLKQ9H2G2 1235 aaPredicted RBP15.35■□□□□ 0.05
LINC00477-201ENST00000483544 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
LINC00477-201ENST00000483544 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
LINC00477-201ENST00000483544 CDC45O75419 566 aa15.34■□□□□ 0.05
LINC00477-201ENST00000483544 RGS22Q8NE09 1264 aa15.34■□□□□ 0.05
LINC00477-201ENST00000483544 ZHX1Q9UKY1 873 aaPredicted RBP15.34■□□□□ 0.05
LINC00477-201ENST00000483544 RGPD8O14715 1765 aaPredicted RBP15.34■□□□□ 0.05
LINC00477-201ENST00000483544 N4BP2Q86UW6 1770 aaPredicted RBP15.34■□□□□ 0.05
LINC00477-201ENST00000483544 RGS12O14924 1447 aa15.34■□□□□ 0.05
LINC00477-201ENST00000483544 PIK3C2AO00443 1686 aa15.34■□□□□ 0.05
LINC00477-201ENST00000483544 XRCC6P12956 609 aaKnown RBP eCLIP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms