RNA–Protein interactions for RNA: ENST00000483538.1

POLR1A-207, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-207ENST00000483538 LY75O60449 1722 aa12.16□□□□□ -0.46
POLR1A-207ENST00000483538 PARD3Q8TEW0 1356 aa12.15□□□□□ -0.46
POLR1A-207ENST00000483538 MTHFSP49914 203 aa12.14□□□□□ -0.47
POLR1A-207ENST00000483538 FAM196AQ6ZSG2 479 aa12.14□□□□□ -0.47
POLR1A-207ENST00000483538 DEFB132Q7Z7B7 95 aa12.14□□□□□ -0.47
POLR1A-207ENST00000483538 KDRP35968 1356 aa12.14□□□□□ -0.47
POLR1A-207ENST00000483538 PAPPAQ13219 1627 aa12.14□□□□□ -0.47
POLR1A-207ENST00000483538 ADAMTS7Q9UKP4 1686 aa12.13□□□□□ -0.47
POLR1A-207ENST00000483538 TRIM37O94972 964 aa12.13□□□□□ -0.47
POLR1A-207ENST00000483538 IL13P35225 146 aa12.13□□□□□ -0.47
POLR1A-207ENST00000483538 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
POLR1A-207ENST00000483538 CCDC125Q86Z20 511 aa12.13□□□□□ -0.47
POLR1A-207ENST00000483538 EXOC5O00471 708 aa12.12□□□□□ -0.47
POLR1A-207ENST00000483538 AEBP1Q8IUX7 1158 aa12.12□□□□□ -0.47
POLR1A-207ENST00000483538 SCN11AQ9UI33 1791 aa12.12□□□□□ -0.47
POLR1A-207ENST00000483538 PLEKHG2Q9H7P9 1386 aa12.11□□□□□ -0.47
POLR1A-207ENST00000483538 TUBGCP6Q96RT7 1819 aa12.1□□□□□ -0.47
POLR1A-207ENST00000483538 KCNQ2O43526 872 aa12.1□□□□□ -0.47
POLR1A-207ENST00000483538 PPP2R1AP30153 589 aa12.1□□□□□ -0.47
POLR1A-207ENST00000483538 DDX10Q13206 875 aaKnown RBP12.1□□□□□ -0.47
POLR1A-207ENST00000483538 CYP27B1O15528 508 aa12.09□□□□□ -0.47
POLR1A-207ENST00000483538 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
POLR1A-207ENST00000483538 ZCRB1Q8TBF4 217 aaKnown RBP12.09□□□□□ -0.47
POLR1A-207ENST00000483538 RAPGEF4Q8WZA2 1011 aa12.09□□□□□ -0.47
POLR1A-207ENST00000483538 SIPA1L3O60292 1781 aaPredicted RBP12.08□□□□□ -0.48
POLR1A-207ENST00000483538 TATP17735 454 aaPredicted RBP12.08□□□□□ -0.48
POLR1A-207ENST00000483538 DDX54Q8TDD1 881 aaKnown RBP12.08□□□□□ -0.48
POLR1A-207ENST00000483538 CAMKK2Q96RR4 588 aa12.08□□□□□ -0.48
POLR1A-207ENST00000483538 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
POLR1A-207ENST00000483538 TAF1LQ8IZX4 1826 aa12.08□□□□□ -0.48
POLR1A-207ENST00000483538 PCDH11XQ9BZA7 1347 aa12.08□□□□□ -0.48
POLR1A-207ENST00000483538 PCDH11YQ9BZA8 1340 aa12.08□□□□□ -0.48
POLR1A-207ENST00000483538 CASZ1Q86V15 1759 aa12.07□□□□□ -0.48
POLR1A-207ENST00000483538 C5P01031 1676 aa12.07□□□□□ -0.48
POLR1A-207ENST00000483538 KDM6AO15550 1401 aaPredicted RBP12.07□□□□□ -0.48
POLR1A-207ENST00000483538 EZH2Q15910 746 aaKnown RBP12.07□□□□□ -0.48
POLR1A-207ENST00000483538 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
POLR1A-207ENST00000483538 KAT6BQ8WYB5 2073 aa12.06□□□□□ -0.48
POLR1A-207ENST00000483538 DLG5Q8TDM6 1919 aa12.06□□□□□ -0.48
POLR1A-207ENST00000483538 APBA3O96018 575 aa12.06□□□□□ -0.48
POLR1A-207ENST00000483538 BAG6P46379 1132 aa12.06□□□□□ -0.48
POLR1A-207ENST00000483538 SULT6B1Q6IMI4 303 aa12.06□□□□□ -0.48
POLR1A-207ENST00000483538 QSER1Q2KHR3 1735 aa12.06□□□□□ -0.48
POLR1A-207ENST00000483538 DIAPH1O60610 1272 aaKnown RBP12.05□□□□□ -0.48
POLR1A-207ENST00000483538 SF3B2Q13435 895 aaKnown RBP12.05□□□□□ -0.48
POLR1A-207ENST00000483538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.05□□□□□ -0.484e-6■□□□□ 11.2
POLR1A-207ENST00000483538 MRC1P22897 1456 aa12.05□□□□□ -0.48
POLR1A-207ENST00000483538 CICQ96RK0 1608 aaPredicted RBP12.04□□□□□ -0.48
POLR1A-207ENST00000483538 COL5A3P25940 1745 aaPredicted RBP12.04□□□□□ -0.48
POLR1A-207ENST00000483538 PHKG2P15735 406 aa12.04□□□□□ -0.48
POLR1A-207ENST00000483538 PROM2Q8N271 834 aa12.04□□□□□ -0.48
POLR1A-207ENST00000483538 ZNF831Q5JPB2 1677 aa12.03□□□□□ -0.48
POLR1A-207ENST00000483538 UBR2Q8IWV8 1755 aa12.03□□□□□ -0.48
POLR1A-207ENST00000483538 HMOX1P09601 288 aa12.03□□□□□ -0.48
POLR1A-207ENST00000483538 NKX1-1Q15270 411 aaPredicted RBP12.03□□□□□ -0.48
POLR1A-207ENST00000483538 TJP1Q07157 1748 aa12.03□□□□□ -0.48
POLR1A-207ENST00000483538 LRP5O75197 1615 aa12.02□□□□□ -0.49
POLR1A-207ENST00000483538 ZNF316A6NFI3 1004 aaPredicted RBP12.02□□□□□ -0.49
POLR1A-207ENST00000483538 PLSCR1O15162 318 aa12.02□□□□□ -0.49
POLR1A-207ENST00000483538 PRIM1P49642 420 aaKnown RBP12.02□□□□□ -0.49
POLR1A-207ENST00000483538 SPG7Q9UQ90 795 aa12.02□□□□□ -0.49
POLR1A-207ENST00000483538 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
POLR1A-207ENST00000483538 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
POLR1A-207ENST00000483538 C4BP0C0L5 1744 aa12□□□□□ -0.49
POLR1A-207ENST00000483538 U2SURPO15042 1029 aaKnown RBP11.99□□□□□ -0.49
POLR1A-207ENST00000483538 RALBP1Q15311 655 aa11.99□□□□□ -0.49
POLR1A-207ENST00000483538 IFNL2Q8IZJ0 200 aa11.99□□□□□ -0.49
POLR1A-207ENST00000483538 PRKRIP1Q9H875 184 aaPredicted RBP11.99□□□□□ -0.49
POLR1A-207ENST00000483538 LRRC4BQ9NT99 713 aa11.99□□□□□ -0.49
POLR1A-207ENST00000483538 MYBBP1AQ9BQG0 1328 aaKnown RBP11.99□□□□□ -0.49
POLR1A-207ENST00000483538 COL24A1Q17RW2 1714 aa11.99□□□□□ -0.49
POLR1A-207ENST00000483538 UBR3Q6ZT12 1888 aa11.99□□□□□ -0.49
POLR1A-207ENST00000483538 TXNRD1Q16881 649 aa11.98□□□□□ -0.49
POLR1A-207ENST00000483538 MTHFSDQ2M296 383 aaKnown RBP11.98□□□□□ -0.49
POLR1A-207ENST00000483538 AMOTQ4VCS5 1084 aa11.98□□□□□ -0.49
POLR1A-207ENST00000483538 PLEKHO1Q53GL0 409 aaPredicted RBP11.98□□□□□ -0.49
POLR1A-207ENST00000483538 ZNF530Q6P9A1 599 aaPredicted RBP11.98□□□□□ -0.49
POLR1A-207ENST00000483538 SYTL4Q96C24 671 aaPredicted RBP11.98□□□□□ -0.49
POLR1A-207ENST00000483538 CFAP53Q96M91 514 aa11.98□□□□□ -0.49
POLR1A-207ENST00000483538 KCPQ6ZWJ8 1503 aa11.97□□□□□ -0.49
POLR1A-207ENST00000483538 SRCAPQ6ZRS2 3230 aa11.97□□□□□ -0.49
POLR1A-207ENST00000483538 PIGBQ92521 554 aa11.97□□□□□ -0.49
POLR1A-207ENST00000483538 PHACTR3Q96KR7 559 aa11.97□□□□□ -0.49
POLR1A-207ENST00000483538 PALLDQ8WX93 1383 aa11.96□□□□□ -0.49
POLR1A-207ENST00000483538 PSDA5PKW4 1024 aaPredicted RBP11.96□□□□□ -0.49
POLR1A-207ENST00000483538 PRKAR2BP31323 418 aa11.96□□□□□ -0.49
POLR1A-207ENST00000483538 KCNQ4P56696 695 aa11.96□□□□□ -0.49
POLR1A-207ENST00000483538 MPRIPQ6WCQ1 1025 aa11.96□□□□□ -0.49
POLR1A-207ENST00000483538 KDM3BQ7LBC6 1761 aa11.96□□□□□ -0.49
POLR1A-207ENST00000483538 MAP3K5Q99683 1374 aa11.95□□□□□ -0.5
POLR1A-207ENST00000483538 C4AP0C0L4 1744 aa11.95□□□□□ -0.5
POLR1A-207ENST00000483538 R3HDM1Q15032 1099 aaKnown RBP11.95□□□□□ -0.5
POLR1A-207ENST00000483538 DCAF5Q96JK2 942 aa11.95□□□□□ -0.5
POLR1A-207ENST00000483538 U2AF1L5P0DN76 240 aaPredicted RBP11.94□□□□□ -0.5
POLR1A-207ENST00000483538 U2AF1Q01081 240 aaKnown RBP eCLIP11.94□□□□□ -0.5
POLR1A-207ENST00000483538 ZNF827Q17R98 1081 aa11.94□□□□□ -0.5
POLR1A-207ENST00000483538 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
POLR1A-207ENST00000483538 MYH14Q7Z406 1995 aaKnown RBP11.94□□□□□ -0.5
POLR1A-207ENST00000483538 ERVV-2B6SEH9 535 aa11.93□□□□□ -0.5
POLR1A-207ENST00000483538 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms