RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SBNO1A3KN83 1393 aa8.62□□□□□ -1.03
CSDE1-207ENST00000483407 ARHGEF10O15013 1369 aa8.62□□□□□ -1.03
CSDE1-207ENST00000483407 FAM205CA6NFA0 338 aa8.62□□□□□ -1.03
CSDE1-207ENST00000483407 MAP2K5Q13163 448 aa8.62□□□□□ -1.03
CSDE1-207ENST00000483407 VPS72Q15906 364 aa8.62□□□□□ -1.03
CSDE1-207ENST00000483407 KDM4CQ9H3R0 1056 aa8.62□□□□□ -1.03
CSDE1-207ENST00000483407 ANO8Q9HCE9 1232 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-207ENST00000483407 RALGAPBQ86X10 1494 aa8.62□□□□□ -1.03
CSDE1-207ENST00000483407 KIF1AQ12756 1690 aa8.62□□□□□ -1.03
CSDE1-207ENST00000483407 BLMP54132 1417 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-207ENST00000483407 KNDC1Q76NI1 1749 aa8.61□□□□□ -1.03
CSDE1-207ENST00000483407 IRF6O14896 467 aa8.61□□□□□ -1.03
CSDE1-207ENST00000483407 HIC1Q14526 733 aa8.61□□□□□ -1.03
CSDE1-207ENST00000483407 C3orf67Q6ZVT6 689 aa8.61□□□□□ -1.03
CSDE1-207ENST00000483407 SEPT12Q8IYM1 358 aa8.61□□□□□ -1.03
CSDE1-207ENST00000483407 CABLES1Q8TDN4 633 aa8.61□□□□□ -1.03
CSDE1-207ENST00000483407 ANKARQ7Z5J8 1434 aa8.61□□□□□ -1.03
CSDE1-207ENST00000483407 NRXN1Q9ULB1 1477 aa8.6□□□□□ -1.03
CSDE1-207ENST00000483407 A0A0G2JS52 829 aa8.6□□□□□ -1.03
CSDE1-207ENST00000483407 POTEB3A0JP26 581 aa8.6□□□□□ -1.03
CSDE1-207ENST00000483407 GNPATO15228 680 aa8.6□□□□□ -1.03
CSDE1-207ENST00000483407 FCHSD2O94868 740 aa8.6□□□□□ -1.03
CSDE1-207ENST00000483407 MYT1Q01538 1121 aa8.6□□□□□ -1.03
CSDE1-207ENST00000483407 POTEBQ6S5H4 581 aa8.6□□□□□ -1.03
CSDE1-207ENST00000483407 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
CSDE1-207ENST00000483407 FMN2Q9NZ56 1722 aa8.6□□□□□ -1.03
CSDE1-207ENST00000483407 EIF3AQ14152 1382 aaKnown RBP8.6□□□□□ -1.03
CSDE1-207ENST00000483407 GPRASP1Q5JY77 1395 aa8.6□□□□□ -1.03
CSDE1-207ENST00000483407 USP32Q8NFA0 1604 aa8.59□□□□□ -1.03
CSDE1-207ENST00000483407 ONECUT3O60422 494 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-207ENST00000483407 PRIM1P49642 420 aaKnown RBP8.59□□□□□ -1.03
CSDE1-207ENST00000483407 KRT27Q7Z3Y8 459 aa8.59□□□□□ -1.03
CSDE1-207ENST00000483407 TRAK1Q9UPV9 953 aa8.59□□□□□ -1.03
CSDE1-207ENST00000483407 IFT172Q9UG01 1749 aa8.59□□□□□ -1.03
CSDE1-207ENST00000483407 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.58□□□□□ -1.04
CSDE1-207ENST00000483407 GLI3P10071 1580 aa8.58□□□□□ -1.04
CSDE1-207ENST00000483407 FAM83GA6ND36 823 aa8.58□□□□□ -1.04
CSDE1-207ENST00000483407 ZNF316A6NFI3 1004 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-207ENST00000483407 DEFB132Q7Z7B7 95 aa8.58□□□□□ -1.04
CSDE1-207ENST00000483407 CCDC102AQ96A19 550 aa8.58□□□□□ -1.04
CSDE1-207ENST00000483407 STAC3Q96MF2 364 aa8.58□□□□□ -1.04
CSDE1-207ENST00000483407 HIRIP3Q9BW71 556 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-207ENST00000483407 DLC1Q96QB1 1528 aa8.58□□□□□ -1.04
CSDE1-207ENST00000483407 MARF1Q9Y4F3 1742 aaKnown RBP8.57□□□□□ -1.04
CSDE1-207ENST00000483407 BAG6P46379 1132 aa8.57□□□□□ -1.04
CSDE1-207ENST00000483407 PTGDRQ13258 359 aa8.57□□□□□ -1.04
CSDE1-207ENST00000483407 NGDNQ8NEJ9 315 aaKnown RBP8.57□□□□□ -1.04
CSDE1-207ENST00000483407 IL27Q8NEV9 243 aa8.57□□□□□ -1.04
CSDE1-207ENST00000483407 BTG4Q9NY30 223 aa8.57□□□□□ -1.04
CSDE1-207ENST00000483407 EP400Q96L91 3159 aa8.57□□□□□ -1.04
CSDE1-207ENST00000483407 RAB3GAP2Q9H2M9 1393 aa8.57□□□□□ -1.04
CSDE1-207ENST00000483407 WASLO00401 505 aaPredicted RBP8.56□□□□□ -1.04
CSDE1-207ENST00000483407 FECHP22830 423 aa8.56□□□□□ -1.04
CSDE1-207ENST00000483407 AMHR2Q16671 573 aa8.56□□□□□ -1.04
CSDE1-207ENST00000483407 FAM98CQ17RN3 349 aaKnown RBP8.56□□□□□ -1.04
CSDE1-207ENST00000483407 DCAF11Q8TEB1 546 aa8.56□□□□□ -1.04
CSDE1-207ENST00000483407 RNF166Q96A37 237 aaPredicted RBP8.56□□□□□ -1.04
CSDE1-207ENST00000483407 PRR36Q9H6K5 1346 aa8.54□□□□□ -1.04
CSDE1-207ENST00000483407 ADGRB1O14514 1584 aa8.54□□□□□ -1.04
CSDE1-207ENST00000483407 ADGRB2O60241 1585 aa8.54□□□□□ -1.04
CSDE1-207ENST00000483407 PHF14O94880 888 aa8.54□□□□□ -1.04
CSDE1-207ENST00000483407 EPAS1Q99814 870 aa8.54□□□□□ -1.04
CSDE1-207ENST00000483407 PRDM11Q9NQV5 511 aa8.54□□□□□ -1.04
CSDE1-207ENST00000483407 TULP4Q9NRJ4 1543 aa8.54□□□□□ -1.04
CSDE1-207ENST00000483407 EN1Q05925 392 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-207ENST00000483407 NWD2Q9ULI1 1742 aa8.53□□□□□ -1.04
CSDE1-207ENST00000483407 SPATA31A5Q5VU36 1347 aa8.53□□□□□ -1.04
CSDE1-207ENST00000483407 SPATA31A7Q8IWB4 1347 aa8.53□□□□□ -1.04
CSDE1-207ENST00000483407 NUDT16Q96DE0 195 aaKnown RBP8.52□□□□□ -1.05
CSDE1-207ENST00000483407 NPDC1Q9NQX5 325 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-207ENST00000483407 PLCH1Q4KWH8 1693 aa8.52□□□□□ -1.05
CSDE1-207ENST00000483407 HRCP23327 699 aa8.51□□□□□ -1.05
CSDE1-207ENST00000483407 PARP9Q8IXQ6 854 aa8.51□□□□□ -1.05
CSDE1-207ENST00000483407 FAM117AQ9C073 453 aa8.51□□□□□ -1.05
CSDE1-207ENST00000483407 PCDHGA4Q9Y5G9 962 aa8.51□□□□□ -1.05
CSDE1-207ENST00000483407 RGPD8O14715 1765 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-207ENST00000483407 KIAA0232Q92628 1395 aa8.5□□□□□ -1.05
CSDE1-207ENST00000483407 PSDA5PKW4 1024 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-207ENST00000483407 CDK19Q9BWU1 502 aa8.5□□□□□ -1.05
CSDE1-207ENST00000483407 STRN4Q9NRL3 753 aa8.5□□□□□ -1.05
CSDE1-207ENST00000483407 PCDHGA10Q9Y5H3 936 aa8.5□□□□□ -1.05
CSDE1-207ENST00000483407 COL14A1Q05707 1796 aaKnown RBP8.5□□□□□ -1.05
CSDE1-207ENST00000483407 ATP7BP35670 1465 aa8.5□□□□□ -1.05
CSDE1-207ENST00000483407 SPATA31A1Q5TZJ5 1347 aa8.5□□□□□ -1.05
CSDE1-207ENST00000483407 ABCA3Q99758 1704 aa8.49□□□□□ -1.05
CSDE1-207ENST00000483407 EVA1CP58658 441 aa8.49□□□□□ -1.05
CSDE1-207ENST00000483407 ZC3H6P61129 1189 aaKnown RBP8.49□□□□□ -1.05
CSDE1-207ENST00000483407 CHRNA2Q15822 529 aa8.49□□□□□ -1.05
CSDE1-207ENST00000483407 FAM182BQ5T319 152 aa8.49□□□□□ -1.05
CSDE1-207ENST00000483407 FAM196AQ6ZSG2 479 aa8.49□□□□□ -1.05
CSDE1-207ENST00000483407 DDRGK1Q96HY6 314 aa8.49□□□□□ -1.05
CSDE1-207ENST00000483407 BRWD3Q6RI45 1802 aa8.49□□□□□ -1.05
CSDE1-207ENST00000483407 ACEP12821 1306 aa8.49□□□□□ -1.05
CSDE1-207ENST00000483407 TRPM3Q9HCF6 1732 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-207ENST00000483407 PLEKHG3A1L390 1219 aa8.48□□□□□ -1.05
CSDE1-207ENST00000483407 NBPF8Q3BBV2 869 aa8.48□□□□□ -1.05
CSDE1-207ENST00000483407 IFFO2Q5TF58 517 aa8.48□□□□□ -1.05
CSDE1-207ENST00000483407 NUTM2GQ5VZR2 741 aa8.48□□□□□ -1.05
CSDE1-207ENST00000483407 ABTB2Q8N961 1025 aa8.48□□□□□ -1.05
CSDE1-207ENST00000483407 CDHR5Q9HBB8 845 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms