RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 POLA2Q14181 598 aa11.36□□□□□ -0.59
SYN3-212ENST00000483062 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
SYN3-212ENST00000483062 DNAJC5GQ8N7S2 189 aa11.36□□□□□ -0.59
SYN3-212ENST00000483062 GPBP1L1Q9HC44 474 aaPredicted RBP11.36□□□□□ -0.59
SYN3-212ENST00000483062 TFCP2L1Q9NZI6 479 aa11.36□□□□□ -0.59
SYN3-212ENST00000483062 QSER1Q2KHR3 1735 aa11.35□□□□□ -0.59
SYN3-212ENST00000483062 KCNQ4P56696 695 aa11.35□□□□□ -0.59
SYN3-212ENST00000483062 BTAF1O14981 1849 aa11.35□□□□□ -0.59
SYN3-212ENST00000483062 NSD2O96028 1365 aa11.34□□□□□ -0.59
SYN3-212ENST00000483062 USP31Q70CQ4 1352 aa11.34□□□□□ -0.59
SYN3-212ENST00000483062 KIF3CO14782 793 aa11.34□□□□□ -0.59
SYN3-212ENST00000483062 SOX12O15370 315 aa11.34□□□□□ -0.59
SYN3-212ENST00000483062 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
SYN3-212ENST00000483062 NLRP2Q9NX02 1062 aa11.34□□□□□ -0.59
SYN3-212ENST00000483062 CD2APQ9Y5K6 639 aa11.34□□□□□ -0.59
SYN3-212ENST00000483062 RGPD5Q99666 1765 aa11.33□□□□□ -0.6
SYN3-212ENST00000483062 EVC2Q86UK5 1308 aa11.32□□□□□ -0.6
SYN3-212ENST00000483062 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
SYN3-212ENST00000483062 ANKRD24Q8TF21 1146 aa11.31□□□□□ -0.6
SYN3-212ENST00000483062 ANKRD36BQ8N2N9 1353 aa11.3□□□□□ -0.6
SYN3-212ENST00000483062 APLP1P51693 650 aa11.29□□□□□ -0.6
SYN3-212ENST00000483062 DDX54Q8TDD1 881 aaKnown RBP11.29□□□□□ -0.6
SYN3-212ENST00000483062 KTN1Q86UP2 1357 aaKnown RBP11.28□□□□□ -0.6
SYN3-212ENST00000483062 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
SYN3-212ENST00000483062 MSL1Q68DK7 614 aa11.28□□□□□ -0.6
SYN3-212ENST00000483062 ZNF526Q8TF50 670 aaPredicted RBP11.28□□□□□ -0.6
SYN3-212ENST00000483062 CCNL1Q9UK58 526 aaPredicted RBP11.28□□□□□ -0.6
SYN3-212ENST00000483062 SBNO2Q9Y2G9 1366 aa11.28□□□□□ -0.6
SYN3-212ENST00000483062 NME9Q86XW9 330 aa11.27□□□□□ -0.61
SYN3-212ENST00000483062 IP6K1Q92551 441 aa11.27□□□□□ -0.61
SYN3-212ENST00000483062 MON2Q7Z3U7 1717 aa11.26□□□□□ -0.61
SYN3-212ENST00000483062 PCNTO95613 3336 aa11.26□□□□□ -0.61
SYN3-212ENST00000483062 USP54Q70EL1 1684 aa11.26□□□□□ -0.61
SYN3-212ENST00000483062 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
SYN3-212ENST00000483062 COL13A1Q5TAT6 717 aaPredicted RBP11.25□□□□□ -0.61
SYN3-212ENST00000483062 AMIGO3Q86WK7 504 aa11.25□□□□□ -0.61
SYN3-212ENST00000483062 JMYQ8N9B5 988 aa11.25□□□□□ -0.61
SYN3-212ENST00000483062 LY75O60449 1722 aa11.25□□□□□ -0.61
SYN3-212ENST00000483062 TOMM70O94826 608 aa11.24□□□□□ -0.61
SYN3-212ENST00000483062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.24□□□□□ -0.61
SYN3-212ENST00000483062 FLAD1Q8NFF5 587 aa11.24□□□□□ -0.61
SYN3-212ENST00000483062 SYTL4Q96C24 671 aaPredicted RBP11.24□□□□□ -0.61
SYN3-212ENST00000483062 IGSF1Q8N6C5 1336 aa11.24□□□□□ -0.61
SYN3-212ENST00000483062 ZCRB1Q8TBF4 217 aaKnown RBP11.23□□□□□ -0.61
SYN3-212ENST00000483062 CICQ96RK0 1608 aaPredicted RBP11.21□□□□□ -0.61
SYN3-212ENST00000483062 USP47Q96K76 1375 aa11.21□□□□□ -0.61
SYN3-212ENST00000483062 L3MBTL2Q969R5 705 aa11.21□□□□□ -0.61
SYN3-212ENST00000483062 MEGF6O75095 1541 aa11.2□□□□□ -0.62
SYN3-212ENST00000483062 KAT6BQ8WYB5 2073 aa11.2□□□□□ -0.62
SYN3-212ENST00000483062 PRELPP51888 382 aa11.2□□□□□ -0.62
SYN3-212ENST00000483062 KLRG1Q96E93 195 aa11.2□□□□□ -0.62
SYN3-212ENST00000483062 PCGF6Q9BYE7 350 aa11.2□□□□□ -0.62
SYN3-212ENST00000483062 EDC4Q6P2E9 1401 aaKnown RBP11.19□□□□□ -0.62
SYN3-212ENST00000483062 HMGB2P26583 209 aaKnown RBP11.19□□□□□ -0.62
SYN3-212ENST00000483062 SLC12A5Q9H2X9 1139 aa11.19□□□□□ -0.62
SYN3-212ENST00000483062 LTN1O94822 1766 aa11.18□□□□□ -0.62
SYN3-212ENST00000483062 FAM208AQ9UK61 1670 aaKnown RBP11.18□□□□□ -0.62
SYN3-212ENST00000483062 CGNL1Q0VF96 1302 aa11.18□□□□□ -0.62
SYN3-212ENST00000483062 MAP3K19Q56UN5 1328 aa11.18□□□□□ -0.62
SYN3-212ENST00000483062 HOXC9P31274 260 aa11.18□□□□□ -0.62
SYN3-212ENST00000483062 SMIM5Q71RC9 77 aa11.18□□□□□ -0.62
SYN3-212ENST00000483062 RBM46Q8TBY0 533 aaKnown RBP11.18□□□□□ -0.62
SYN3-212ENST00000483062 LTV1Q96GA3 475 aaPredicted RBP11.18□□□□□ -0.62
SYN3-212ENST00000483062 NMRK2Q9NPI5 230 aa11.18□□□□□ -0.62
SYN3-212ENST00000483062 WWC3Q9ULE0 1092 aa11.18□□□□□ -0.62
SYN3-212ENST00000483062 ROCK2O75116 1388 aaKnown RBP11.17□□□□□ -0.62
SYN3-212ENST00000483062 PALLDQ8WX93 1383 aa11.17□□□□□ -0.62
SYN3-212ENST00000483062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.17□□□□□ -0.62
SYN3-212ENST00000483062 HTRA3P83110 453 aa11.17□□□□□ -0.62
SYN3-212ENST00000483062 NBPF6Q5VWK0 638 aa11.17□□□□□ -0.62
SYN3-212ENST00000483062 NBPF4Q96M43 638 aa11.17□□□□□ -0.62
SYN3-212ENST00000483062 DOT1LQ8TEK3 1739 aa11.17□□□□□ -0.62
SYN3-212ENST00000483062 FBLN1P23142 703 aa11.16□□□□□ -0.62
SYN3-212ENST00000483062 SSFA2P28290 1259 aa11.16□□□□□ -0.62
SYN3-212ENST00000483062 SIN3AQ96ST3 1273 aa11.16□□□□□ -0.62
SYN3-212ENST00000483062 PXDNLA1KZ92 1463 aa11.15□□□□□ -0.62
SYN3-212ENST00000483062 FSTL1Q12841 308 aa11.15□□□□□ -0.62
SYN3-212ENST00000483062 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.62
SYN3-212ENST00000483062 PUS7Q96PZ0 661 aaKnown RBP11.15□□□□□ -0.62
SYN3-212ENST00000483062 TOGARAM1Q9Y4F4 1720 aa11.15□□□□□ -0.63
SYN3-212ENST00000483062 A0A1W2PP64 1363 aa11.15□□□□□ -0.63
SYN3-212ENST00000483062 CYP27B1O15528 508 aa11.14□□□□□ -0.63
SYN3-212ENST00000483062 TGFB2P61812 414 aa11.14□□□□□ -0.63
SYN3-212ENST00000483062 TNS4Q8IZW8 715 aa11.14□□□□□ -0.63
SYN3-212ENST00000483062 AK7Q96M32 723 aa11.14□□□□□ -0.63
SYN3-212ENST00000483062 C5P01031 1676 aa11.14□□□□□ -0.63
SYN3-212ENST00000483062 NSD3Q9BZ95 1437 aa11.13□□□□□ -0.63
SYN3-212ENST00000483062 LINC00116Q8NCU8 138 aa11.13□□□□□ -0.63
SYN3-212ENST00000483062 PIGBQ92521 554 aa11.13□□□□□ -0.63
SYN3-212ENST00000483062 SMARCC1Q92922 1105 aaPredicted RBP11.13□□□□□ -0.63
SYN3-212ENST00000483062 TERF2IPQ9NYB0 399 aa11.13□□□□□ -0.63
SYN3-212ENST00000483062 ZBTB12Q9Y330 459 aaPredicted RBP11.13□□□□□ -0.63
SYN3-212ENST00000483062 C4BP0C0L5 1744 aa11.12□□□□□ -0.63
SYN3-212ENST00000483062 A0A0G2JLW4 131 aa11.12□□□□□ -0.63
SYN3-212ENST00000483062 PHF14O94880 888 aa11.12□□□□□ -0.63
SYN3-212ENST00000483062 KCNA3P22001 575 aa11.12□□□□□ -0.63
SYN3-212ENST00000483062 NKX1-1Q15270 411 aaPredicted RBP11.12□□□□□ -0.63
SYN3-212ENST00000483062 MPRIPQ6WCQ1 1025 aa11.12□□□□□ -0.63
SYN3-212ENST00000483062 TMC1Q8TDI8 760 aa11.12□□□□□ -0.63
SYN3-212ENST00000483062 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms