RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 MAP7D2Q96T17 732 aa17.63■□□□□ 0.41
COL9A2-207ENST00000482722 LRRC7Q96NW7 1537 aa17.63■□□□□ 0.41
COL9A2-207ENST00000482722 UQCRHLA0A096LP55 91 aa17.62■□□□□ 0.41
COL9A2-207ENST00000482722 UQCRHP07919 91 aa17.62■□□□□ 0.41
COL9A2-207ENST00000482722 NCLP19338 710 aaKnown RBP17.62■□□□□ 0.41
COL9A2-207ENST00000482722 ZNF445P59923 1031 aa17.62■□□□□ 0.41
COL9A2-207ENST00000482722 CAVIN1Q6NZI2 390 aaKnown RBP17.62■□□□□ 0.41
COL9A2-207ENST00000482722 THEMISQ8N1K5 641 aaPredicted RBP17.62■□□□□ 0.41
COL9A2-207ENST00000482722 NOL7Q9UMY1 257 aaKnown RBP17.62■□□□□ 0.41
COL9A2-207ENST00000482722 FAM83GA6ND36 823 aa17.62■□□□□ 0.41
COL9A2-207ENST00000482722 AEBP1Q8IUX7 1158 aa17.62■□□□□ 0.41
COL9A2-207ENST00000482722 RBSNQ9H1K0 784 aa17.62■□□□□ 0.41
COL9A2-207ENST00000482722 NFE2L2Q16236 605 aa17.62■□□□□ 0.41
COL9A2-207ENST00000482722 ARID3AQ99856 593 aa17.62■□□□□ 0.41
COL9A2-207ENST00000482722 C3P01024 1663 aa17.61■□□□□ 0.41
COL9A2-207ENST00000482722 ZNF500O60304 480 aaPredicted RBP17.61■□□□□ 0.41
COL9A2-207ENST00000482722 ZSCAN23Q3MJ62 389 aa17.61■□□□□ 0.41
COL9A2-207ENST00000482722 ALDH1L2Q3SY69 923 aa17.61■□□□□ 0.41
COL9A2-207ENST00000482722 HS1BP3Q53T59 392 aa17.61■□□□□ 0.41
COL9A2-207ENST00000482722 MCTP1Q6DN14 999 aa17.61■□□□□ 0.41
COL9A2-207ENST00000482722 PNPLA6Q8IY17 1366 aa17.61■□□□□ 0.41
COL9A2-207ENST00000482722 HSP90AB2PQ58FF8 381 aa17.6■□□□□ 0.41
COL9A2-207ENST00000482722 NGDNQ8NEJ9 315 aaKnown RBP17.6■□□□□ 0.41
COL9A2-207ENST00000482722 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
COL9A2-207ENST00000482722 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.6■□□□□ 0.41
COL9A2-207ENST00000482722 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
COL9A2-207ENST00000482722 VAMP4O75379 141 aa17.59■□□□□ 0.41
COL9A2-207ENST00000482722 PDLIM2Q96JY6 352 aa17.59■□□□□ 0.41
COL9A2-207ENST00000482722 MBIPQ9NS73 344 aa17.59■□□□□ 0.41
COL9A2-207ENST00000482722 ZBTB7BO15156 539 aaPredicted RBP17.58■□□□□ 0.41
COL9A2-207ENST00000482722 DLC1Q96QB1 1528 aa17.58■□□□□ 0.41
COL9A2-207ENST00000482722 MED14O60244 1454 aa17.58■□□□□ 0.4
COL9A2-207ENST00000482722 PLEKHG1Q9ULL1 1385 aa17.58■□□□□ 0.4
COL9A2-207ENST00000482722 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
COL9A2-207ENST00000482722 SIRT2Q8IXJ6 389 aa17.58■□□□□ 0.4
COL9A2-207ENST00000482722 TTC21BQ7Z4L5 1316 aa17.58■□□□□ 0.4
COL9A2-207ENST00000482722 TWISTNBQ3B726 338 aaPredicted RBP17.58■□□□□ 0.4
COL9A2-207ENST00000482722 MRPL50Q8N5N7 158 aaKnown RBP17.58■□□□□ 0.4
COL9A2-207ENST00000482722 FAM135BQ49AJ0 1406 aa17.57■□□□□ 0.4
COL9A2-207ENST00000482722 IL13P35225 146 aa17.57■□□□□ 0.4
COL9A2-207ENST00000482722 PRIM1P49642 420 aaKnown RBP17.57■□□□□ 0.4
COL9A2-207ENST00000482722 LMBRD1Q9NUN5 540 aa17.57■□□□□ 0.4
COL9A2-207ENST00000482722 GNAI1P63096 354 aa17.57■□□□□ 0.4
COL9A2-207ENST00000482722 PKP1Q13835 747 aa17.57■□□□□ 0.4
COL9A2-207ENST00000482722 ANKRD26Q9UPS8 1709 aa17.56■□□□□ 0.4
COL9A2-207ENST00000482722 C8orf58Q8NAV2 365 aa17.56■□□□□ 0.4
COL9A2-207ENST00000482722 ATP7BP35670 1465 aa17.56■□□□□ 0.4
COL9A2-207ENST00000482722 FER1L4A9Z1Z3 1794 aa17.56■□□□□ 0.4
COL9A2-207ENST00000482722 ZKSCAN5Q9Y2L8 839 aa17.56■□□□□ 0.4
COL9A2-207ENST00000482722 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
COL9A2-207ENST00000482722 CHAMP1Q96JM3 812 aa17.55■□□□□ 0.4
COL9A2-207ENST00000482722 RBM27Q9P2N5 1060 aaKnown RBP17.55■□□□□ 0.4
COL9A2-207ENST00000482722 KIF20BQ96Q89 1820 aa17.55■□□□□ 0.4
COL9A2-207ENST00000482722 APBB1O00213 710 aa17.54■□□□□ 0.4
COL9A2-207ENST00000482722 SULT6B1Q6IMI4 303 aa17.54■□□□□ 0.4
COL9A2-207ENST00000482722 TBX22Q9Y458 520 aa17.54■□□□□ 0.4
COL9A2-207ENST00000482722 GCC1Q96CN9 775 aa17.54■□□□□ 0.4
COL9A2-207ENST00000482722 RGPD8O14715 1765 aaPredicted RBP17.54■□□□□ 0.4
COL9A2-207ENST00000482722 SETD1BQ9UPS6 1966 aaKnown RBP17.54■□□□□ 0.4
COL9A2-207ENST00000482722 GSPT1P15170 499 aaKnown RBP17.54■□□□□ 0.4
COL9A2-207ENST00000482722 DYNC1I1O14576 645 aa17.53■□□□□ 0.4
COL9A2-207ENST00000482722 KRT24Q2M2I5 525 aa17.53■□□□□ 0.4
COL9A2-207ENST00000482722 C16orf71Q8IYS4 520 aaPredicted RBP17.53■□□□□ 0.4
COL9A2-207ENST00000482722 ZBTB7CA1YPR0 619 aa17.53■□□□□ 0.4
COL9A2-207ENST00000482722 SMAP1Q8IYB5 467 aaPredicted RBP17.53■□□□□ 0.4
COL9A2-207ENST00000482722 IFT57Q9NWB7 429 aa17.53■□□□□ 0.4
COL9A2-207ENST00000482722 CYP2E1P05181 493 aaPredicted RBP17.52■□□□□ 0.4
COL9A2-207ENST00000482722 NUCB2P80303 420 aa17.52■□□□□ 0.4
COL9A2-207ENST00000482722 LTV1Q96GA3 475 aaPredicted RBP17.52■□□□□ 0.4
COL9A2-207ENST00000482722 TECPR2O15040 1411 aa17.52■□□□□ 0.39
COL9A2-207ENST00000482722 CDC45O75419 566 aa17.52■□□□□ 0.39
COL9A2-207ENST00000482722 EIF4A2Q14240 407 aaKnown RBP17.52■□□□□ 0.39
COL9A2-207ENST00000482722 CSPP1Q1MSJ5 1256 aa17.52■□□□□ 0.39
COL9A2-207ENST00000482722 GPT2Q8TD30 523 aa17.52■□□□□ 0.39
COL9A2-207ENST00000482722 SIRT1Q96EB6 747 aa17.52■□□□□ 0.39
COL9A2-207ENST00000482722 PRDM10Q9NQV6 1147 aa17.52■□□□□ 0.39
COL9A2-207ENST00000482722 PRPF40AO75400 957 aaKnown RBP17.51■□□□□ 0.39
COL9A2-207ENST00000482722 FOXD4L5Q5VV16 416 aaPredicted RBP17.5■□□□□ 0.39
COL9A2-207ENST00000482722 MTERF4Q7Z6M4 381 aaKnown RBP17.5■□□□□ 0.39
COL9A2-207ENST00000482722 FOXD4L4Q8WXT5 416 aaPredicted RBP17.5■□□□□ 0.39
COL9A2-207ENST00000482722 NLRP6P59044 892 aa17.5■□□□□ 0.39
COL9A2-207ENST00000482722 SASS6Q6UVJ0 657 aa17.5■□□□□ 0.39
COL9A2-207ENST00000482722 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
COL9A2-207ENST00000482722 MIS18AQ9NYP9 233 aa17.5■□□□□ 0.39
COL9A2-207ENST00000482722 FOXO3O43524 673 aa17.5■□□□□ 0.39
COL9A2-207ENST00000482722 OTUD7AQ8TE49 926 aaPredicted RBP17.5■□□□□ 0.39
COL9A2-207ENST00000482722 CFAP44Q96MT7 982 aa17.5■□□□□ 0.39
COL9A2-207ENST00000482722 RABEP1Q15276 862 aa17.49■□□□□ 0.39
COL9A2-207ENST00000482722 PLEKHG3A1L390 1219 aa17.49■□□□□ 0.39
COL9A2-207ENST00000482722 MCM10Q7L590 875 aa17.49■□□□□ 0.39
COL9A2-207ENST00000482722 ZGPATQ8N5A5 531 aaKnown RBP17.49■□□□□ 0.39
COL9A2-207ENST00000482722 MCM5P33992 734 aa17.48■□□□□ 0.39
COL9A2-207ENST00000482722 CHMP4BQ9H444 224 aaKnown RBP17.48■□□□□ 0.39
COL9A2-207ENST00000482722 PLEKHM2Q8IWE5 1019 aa17.48■□□□□ 0.39
COL9A2-207ENST00000482722 CCDC39Q9UFE4 941 aa17.48■□□□□ 0.39
COL9A2-207ENST00000482722 SYCE3A1L190 88 aa17.47■□□□□ 0.39
COL9A2-207ENST00000482722 ZNF853P0CG23 659 aa17.47■□□□□ 0.39
COL9A2-207ENST00000482722 LMOD3Q0VAK6 560 aa17.47■□□□□ 0.39
COL9A2-207ENST00000482722 ARHGAP45Q92619 1136 aa17.47■□□□□ 0.39
COL9A2-207ENST00000482722 TMEM63CQ9P1W3 806 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms