RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 NUP153P49790 1475 aaKnown RBP10.9□□□□□ -0.66
SNX13-208ENST00000482558 EIF5BO60841 1220 aaKnown RBP10.9□□□□□ -0.66
SNX13-208ENST00000482558 SSTR3P32745 418 aaPredicted RBP10.9□□□□□ -0.66
SNX13-208ENST00000482558 FLIIQ13045 1269 aa10.9□□□□□ -0.66
SNX13-208ENST00000482558 ZNF511Q8NB15 262 aa10.9□□□□□ -0.66
SNX13-208ENST00000482558 BAP1Q92560 729 aa10.9□□□□□ -0.66
SNX13-208ENST00000482558 TLL2Q9Y6L7 1015 aa10.9□□□□□ -0.66
SNX13-208ENST00000482558 NAIPQ13075 1403 aa10.9□□□□□ -0.66
SNX13-208ENST00000482558 SPDYE5A6NIY4 337 aa10.89□□□□□ -0.67
SNX13-208ENST00000482558 IGSF3O75054 1194 aa10.89□□□□□ -0.67
SNX13-208ENST00000482558 ADH1CP00326 375 aa10.89□□□□□ -0.67
SNX13-208ENST00000482558 TRAIPQ9BWF2 469 aa10.89□□□□□ -0.67
SNX13-208ENST00000482558 TROQ12816 1431 aaPredicted RBP10.89□□□□□ -0.67
SNX13-208ENST00000482558 GCC2Q8IWJ2 1684 aa10.89□□□□□ -0.67
SNX13-208ENST00000482558 LINC01559Q495D7 138 aa10.88□□□□□ -0.67
SNX13-208ENST00000482558 CCDC82Q8N4S0 544 aa10.88□□□□□ -0.67
SNX13-208ENST00000482558 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
SNX13-208ENST00000482558 TIMP2P16035 220 aa10.87□□□□□ -0.67
SNX13-208ENST00000482558 BEGAINQ9BUH8 593 aa10.87□□□□□ -0.67
SNX13-208ENST00000482558 ITSN2Q9NZM3 1697 aa10.86□□□□□ -0.67
SNX13-208ENST00000482558 RGS22Q8NE09 1264 aa10.86□□□□□ -0.67
SNX13-208ENST00000482558 SPIRE2Q8WWL2 714 aa10.86□□□□□ -0.67
SNX13-208ENST00000482558 KLF16Q9BXK1 252 aaPredicted RBP10.86□□□□□ -0.67
SNX13-208ENST00000482558 GOPCQ9HD26 462 aa10.86□□□□□ -0.67
SNX13-208ENST00000482558 ADCY10Q96PN6 1610 aa10.86□□□□□ -0.67
SNX13-208ENST00000482558 PTPRKQ15262 1439 aa10.85□□□□□ -0.67
SNX13-208ENST00000482558 WDR4P57081 412 aaKnown RBP10.85□□□□□ -0.67
SNX13-208ENST00000482558 PRR7Q8TB68 274 aa10.85□□□□□ -0.67
SNX13-208ENST00000482558 FAM174AQ8TBP5 190 aa10.85□□□□□ -0.67
SNX13-208ENST00000482558 PURBQ96QR8 312 aaKnown RBP10.85□□□□□ -0.67
SNX13-208ENST00000482558 DNMT1P26358 1616 aaKnown RBP10.84□□□□□ -0.67
SNX13-208ENST00000482558 TONSLQ96HA7 1378 aa10.83□□□□□ -0.68
SNX13-208ENST00000482558 PPP1R15AO75807 674 aaPredicted RBP10.83□□□□□ -0.68
SNX13-208ENST00000482558 CDK11BP21127 795 aaKnown RBP10.83□□□□□ -0.68
SNX13-208ENST00000482558 MTMR2Q13614 643 aa10.83□□□□□ -0.68
SNX13-208ENST00000482558 CDK15Q96Q40 435 aa10.83□□□□□ -0.68
SNX13-208ENST00000482558 ABCA8O94911 1581 aa10.82□□□□□ -0.68
SNX13-208ENST00000482558 PLEKHD1A6NEE1 506 aa10.82□□□□□ -0.68
SNX13-208ENST00000482558 HSP90B1P14625 803 aaKnown RBP10.82□□□□□ -0.68
SNX13-208ENST00000482558 SH3D19Q5HYK7 790 aa10.82□□□□□ -0.68
SNX13-208ENST00000482558 PCMTD1Q96MG8 357 aaPredicted RBP10.82□□□□□ -0.68
SNX13-208ENST00000482558 DAPK1P53355 1430 aa10.82□□□□□ -0.68
SNX13-208ENST00000482558 MOXD2PA6NHM9 499 aa10.81□□□□□ -0.68
SNX13-208ENST00000482558 GJA5P36382 358 aa10.81□□□□□ -0.68
SNX13-208ENST00000482558 NDUFV2P19404 249 aa10.8□□□□□ -0.68
SNX13-208ENST00000482558 TMCO4Q5TGY1 634 aa10.8□□□□□ -0.68
SNX13-208ENST00000482558 KCNMA1Q12791 1236 aa10.79□□□□□ -0.68
SNX13-208ENST00000482558 NEUROD1Q13562 356 aa10.79□□□□□ -0.68
SNX13-208ENST00000482558 LYPD8Q6UX82 237 aa10.79□□□□□ -0.68
SNX13-208ENST00000482558 AEBP1Q8IUX7 1158 aa10.79□□□□□ -0.68
SNX13-208ENST00000482558 CFDP1Q9UEE9 299 aaPredicted RBP10.79□□□□□ -0.68
SNX13-208ENST00000482558 KIF14Q15058 1648 aa10.79□□□□□ -0.68
SNX13-208ENST00000482558 PLB1Q6P1J6 1458 aa10.79□□□□□ -0.68
SNX13-208ENST00000482558 ABCC5O15440 1437 aa10.78□□□□□ -0.68
SNX13-208ENST00000482558 PTPRGP23470 1445 aa10.78□□□□□ -0.68
SNX13-208ENST00000482558 A6NJR5 290 aa10.78□□□□□ -0.68
SNX13-208ENST00000482558 NR5A1Q13285 461 aa10.78□□□□□ -0.68
SNX13-208ENST00000482558 MTMR7Q9Y216 660 aa10.78□□□□□ -0.68
SNX13-208ENST00000482558 ADGRL2O95490 1459 aa10.78□□□□□ -0.68
SNX13-208ENST00000482558 GPATCH8Q9UKJ3 1502 aaKnown RBP10.78□□□□□ -0.68
SNX13-208ENST00000482558 SHANK2Q9UPX8 1470 aa10.77□□□□□ -0.69
SNX13-208ENST00000482558 SOBPA7XYQ1 873 aa10.77□□□□□ -0.69
SNX13-208ENST00000482558 TRAK2O60296 914 aa10.77□□□□□ -0.69
SNX13-208ENST00000482558 MAN1A2O60476 641 aa10.77□□□□□ -0.69
SNX13-208ENST00000482558 DIXDC1Q155Q3 683 aa10.77□□□□□ -0.69
SNX13-208ENST00000482558 SIN3AQ96ST3 1273 aa10.77□□□□□ -0.69
SNX13-208ENST00000482558 PRG4Q92954 1404 aaPredicted RBP10.76□□□□□ -0.69
SNX13-208ENST00000482558 ADGBQ8N7X0 1667 aa10.76□□□□□ -0.69
SNX13-208ENST00000482558 CAMSAP2Q08AD1 1489 aa10.76□□□□□ -0.69
SNX13-208ENST00000482558 ZIC2O95409 532 aaPredicted RBP10.76□□□□□ -0.69
SNX13-208ENST00000482558 SKIV2LQ15477 1246 aaKnown RBP10.76□□□□□ -0.69
SNX13-208ENST00000482558 SHROOM2Q13796 1616 aa10.76□□□□□ -0.69
SNX13-208ENST00000482558 ANKRD30AQ9BXX3 1397 aa10.76□□□□□ -0.69
SNX13-208ENST00000482558 ATP10BO94823 1461 aa10.75□□□□□ -0.69
SNX13-208ENST00000482558 CTHP32929 405 aa10.75□□□□□ -0.69
SNX13-208ENST00000482558 MYSM1Q5VVJ2 828 aa10.75□□□□□ -0.69
SNX13-208ENST00000482558 TRIM52Q96A61 297 aa10.75□□□□□ -0.69
SNX13-208ENST00000482558 TBC1D2Q9BYX2 928 aa10.75□□□□□ -0.69
SNX13-208ENST00000482558 RRP7BPQ9NSQ0 103 aa10.75□□□□□ -0.69
SNX13-208ENST00000482558 PPFIA3O75145 1194 aa10.74□□□□□ -0.69
SNX13-208ENST00000482558 RBM25P49756 843 aaKnown RBP10.74□□□□□ -0.69
SNX13-208ENST00000482558 MPHOSPH9Q99550 1183 aa10.74□□□□□ -0.69
SNX13-208ENST00000482558 ZFAND3Q9H8U3 227 aa10.74□□□□□ -0.69
SNX13-208ENST00000482558 CLK2P49760 499 aaKnown RBP10.73□□□□□ -0.69
SNX13-208ENST00000482558 MFAP1P55081 439 aaKnown RBP10.73□□□□□ -0.69
SNX13-208ENST00000482558 SUZ12Q15022 739 aaKnown RBP10.73□□□□□ -0.69
SNX13-208ENST00000482558 ITPKCQ96DU7 683 aa10.73□□□□□ -0.69
SNX13-208ENST00000482558 POLR3EQ9NVU0 708 aa10.73□□□□□ -0.69
SNX13-208ENST00000482558 CHIC2Q9UKJ5 165 aa10.73□□□□□ -0.69
SNX13-208ENST00000482558 NCOA1Q15788 1441 aa10.73□□□□□ -0.69
SNX13-208ENST00000482558 ABCC10Q5T3U5 1492 aa10.73□□□□□ -0.69
SNX13-208ENST00000482558 SPTLC1O15269 473 aa10.72□□□□□ -0.69
SNX13-208ENST00000482558 UPP2O95045 317 aa10.72□□□□□ -0.69
SNX13-208ENST00000482558 F12P00748 615 aaPredicted RBP10.72□□□□□ -0.69
SNX13-208ENST00000482558 FOXJ1Q92949 421 aa10.72□□□□□ -0.69
SNX13-208ENST00000482558 ARHGEF5Q12774 1597 aa10.72□□□□□ -0.69
SNX13-208ENST00000482558 CROCC2H7BZ55 1655 aa10.72□□□□□ -0.69
SNX13-208ENST00000482558 CHD1O14646 1710 aa10.71□□□□□ -0.69
SNX13-208ENST00000482558 NR3C2P08235 984 aa10.71□□□□□ -0.69
SNX13-208ENST00000482558 GSK3AP49840 483 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms