RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 ANKRD24Q8TF21 1146 aa10.8□□□□□ -0.68
CCNC-204ENST00000482541 BCL11BQ9C0K0 894 aaPredicted RBP10.8□□□□□ -0.68
CCNC-204ENST00000482541 WNK3Q9BYP7 1800 aa10.8□□□□□ -0.68
CCNC-204ENST00000482541 PSDA5PKW4 1024 aaPredicted RBP10.79□□□□□ -0.68
CCNC-204ENST00000482541 IL2RBP14784 551 aa10.79□□□□□ -0.68
CCNC-204ENST00000482541 NBPF14Q5TI25 921 aa10.78□□□□□ -0.68
CCNC-204ENST00000482541 CCER1Q8TC90 406 aaPredicted RBP10.78□□□□□ -0.68
CCNC-204ENST00000482541 SBF2Q86WG5 1849 aa10.78□□□□□ -0.68
CCNC-204ENST00000482541 AMPHP49418 695 aa10.78□□□□□ -0.68
CCNC-204ENST00000482541 R3HDM1Q15032 1099 aaKnown RBP10.78□□□□□ -0.68
CCNC-204ENST00000482541 MAP3K19Q56UN5 1328 aa10.78□□□□□ -0.68
CCNC-204ENST00000482541 HOXC9P31274 260 aa10.77□□□□□ -0.69
CCNC-204ENST00000482541 REM2Q8IYK8 340 aaPredicted RBP10.76□□□□□ -0.69
CCNC-204ENST00000482541 GGNBP2Q9H3C7 697 aa10.76□□□□□ -0.69
CCNC-204ENST00000482541 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
CCNC-204ENST00000482541 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
CCNC-204ENST00000482541 RREB1Q92766 1687 aa10.76□□□□□ -0.69
CCNC-204ENST00000482541 FBLN1P23142 703 aa10.75□□□□□ -0.69
CCNC-204ENST00000482541 CARD14Q9BXL6 1004 aa10.75□□□□□ -0.69
CCNC-204ENST00000482541 TNS2Q63HR2 1409 aa10.75□□□□□ -0.69
CCNC-204ENST00000482541 LRP5O75197 1615 aa10.75□□□□□ -0.69
CCNC-204ENST00000482541 RGL2O15211 777 aa10.75□□□□□ -0.69
CCNC-204ENST00000482541 EIF4G2P78344 907 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCNC-204ENST00000482541 PTF1AQ7RTS3 328 aa10.75□□□□□ -0.69
CCNC-204ENST00000482541 LTV1Q96GA3 475 aaPredicted RBP10.75□□□□□ -0.69
CCNC-204ENST00000482541 FAM208AQ9UK61 1670 aaKnown RBP10.75□□□□□ -0.69
CCNC-204ENST00000482541 RGPD3A6NKT7 1758 aaPredicted RBP10.75□□□□□ -0.69
CCNC-204ENST00000482541 RGPD4Q7Z3J3 1758 aa10.75□□□□□ -0.69
CCNC-204ENST00000482541 RTL1A6NKG5 1358 aa10.74□□□□□ -0.69
CCNC-204ENST00000482541 NUP188Q5SRE5 1749 aa10.74□□□□□ -0.69
CCNC-204ENST00000482541 KIF24Q5T7B8 1368 aa10.73□□□□□ -0.69
CCNC-204ENST00000482541 RRS1Q15050 365 aaKnown RBP10.73□□□□□ -0.69
CCNC-204ENST00000482541 MYOM1P52179 1685 aa10.72□□□□□ -0.69
CCNC-204ENST00000482541 KCNQ2O43526 872 aa10.72□□□□□ -0.69
CCNC-204ENST00000482541 PRR29P0C7W0 189 aa10.72□□□□□ -0.69
CCNC-204ENST00000482541 CGNL1Q0VF96 1302 aa10.71□□□□□ -0.69
CCNC-204ENST00000482541 HSPA5P11021 654 aaKnown RBP10.71□□□□□ -0.69
CCNC-204ENST00000482541 TXNRD1Q16881 649 aa10.71□□□□□ -0.69
CCNC-204ENST00000482541 NBPF6Q5VWK0 638 aa10.71□□□□□ -0.69
CCNC-204ENST00000482541 NBPF4Q96M43 638 aa10.71□□□□□ -0.69
CCNC-204ENST00000482541 KIF20BQ96Q89 1820 aa10.71□□□□□ -0.69
CCNC-204ENST00000482541 NSD3Q9BZ95 1437 aa10.71□□□□□ -0.7
CCNC-204ENST00000482541 INSRP06213 1382 aa10.71□□□□□ -0.7
CCNC-204ENST00000482541 HSP90AB2PQ58FF8 381 aa10.7□□□□□ -0.7
CCNC-204ENST00000482541 ZCRB1Q8TBF4 217 aaKnown RBP10.7□□□□□ -0.7
CCNC-204ENST00000482541 DDX54Q8TDD1 881 aaKnown RBP10.7□□□□□ -0.7
CCNC-204ENST00000482541 ACSBG1Q96GR2 724 aa10.7□□□□□ -0.7
CCNC-204ENST00000482541 SMG6Q86US8 1419 aaKnown RBP10.7□□□□□ -0.7
CCNC-204ENST00000482541 FLT4P35916 1363 aa10.7□□□□□ -0.7
CCNC-204ENST00000482541 NHSQ6T4R5 1651 aa10.7□□□□□ -0.7
CCNC-204ENST00000482541 SRCAPQ6ZRS2 3230 aa10.7□□□□□ -0.7
CCNC-204ENST00000482541 RAPGEF4Q8WZA2 1011 aa10.69□□□□□ -0.7
CCNC-204ENST00000482541 CREBZFQ9NS37 354 aa10.69□□□□□ -0.7
CCNC-204ENST00000482541 RGPD2P0DJD1 1756 aa10.68□□□□□ -0.7
CCNC-204ENST00000482541 POLR3GLQ9BT43 218 aa10.68□□□□□ -0.7
CCNC-204ENST00000482541 SPON1Q9HCB6 807 aa10.68□□□□□ -0.7
CCNC-204ENST00000482541 NUBP1P53384 320 aa10.67□□□□□ -0.7
CCNC-204ENST00000482541 ANO8Q9HCE9 1232 aaPredicted RBP10.67□□□□□ -0.7
CCNC-204ENST00000482541 KAT6BQ8WYB5 2073 aa10.67□□□□□ -0.7
CCNC-204ENST00000482541 WASHC2AQ641Q2 1341 aa10.67□□□□□ -0.7
CCNC-204ENST00000482541 TATP17735 454 aaPredicted RBP10.67□□□□□ -0.7
CCNC-204ENST00000482541 SLC15A2Q16348 729 aa10.67□□□□□ -0.7
CCNC-204ENST00000482541 PANK3Q9H999 370 aa10.67□□□□□ -0.7
CCNC-204ENST00000482541 STK32BQ9NY57 414 aa10.67□□□□□ -0.7
CCNC-204ENST00000482541 EMILIN1Q9Y6C2 1016 aa10.67□□□□□ -0.7
CCNC-204ENST00000482541 PPM1GO15355 546 aaPredicted RBP10.66□□□□□ -0.7
CCNC-204ENST00000482541 BBXQ8WY36 941 aaPredicted RBP10.66□□□□□ -0.7
CCNC-204ENST00000482541 POLKQ9UBT6 870 aa10.66□□□□□ -0.7
CCNC-204ENST00000482541 MAP2P11137 1827 aaKnown RBP10.66□□□□□ -0.7
CCNC-204ENST00000482541 MEGF6O75095 1541 aa10.65□□□□□ -0.7
CCNC-204ENST00000482541 BTAF1O14981 1849 aa10.65□□□□□ -0.7
CCNC-204ENST00000482541 PRIM1P49642 420 aaKnown RBP10.65□□□□□ -0.7
CCNC-204ENST00000482541 MNX1P50219 401 aaPredicted RBP10.65□□□□□ -0.7
CCNC-204ENST00000482541 SLC27A3Q5K4L6 730 aa10.65□□□□□ -0.7
CCNC-204ENST00000482541 USHBP1Q8N6Y0 703 aa10.65□□□□□ -0.7
CCNC-204ENST00000482541 PITPNM1O00562 1244 aa10.64□□□□□ -0.71
CCNC-204ENST00000482541 GSE1Q14687 1217 aa10.64□□□□□ -0.71
CCNC-204ENST00000482541 SYTL4Q96C24 671 aaPredicted RBP10.64□□□□□ -0.71
CCNC-204ENST00000482541 PCDH11XQ9BZA7 1347 aa10.63□□□□□ -0.71
CCNC-204ENST00000482541 PCDH11YQ9BZA8 1340 aa10.63□□□□□ -0.71
CCNC-204ENST00000482541 SHANK3Q9BYB0 1731 aa10.63□□□□□ -0.71
CCNC-204ENST00000482541 ANKRD26Q9UPS8 1709 aa10.63□□□□□ -0.71
CCNC-204ENST00000482541 NSD2O96028 1365 aa10.63□□□□□ -0.71
CCNC-204ENST00000482541 HMGB2P26583 209 aaKnown RBP10.63□□□□□ -0.71
CCNC-204ENST00000482541 LRRC4BQ9NT99 713 aa10.63□□□□□ -0.71
CCNC-204ENST00000482541 PPP1R1BQ9UD71 204 aaPredicted RBP10.63□□□□□ -0.71
CCNC-204ENST00000482541 CASZ1Q86V15 1759 aa10.62□□□□□ -0.71
CCNC-204ENST00000482541 EYA1Q99502 592 aa10.62□□□□□ -0.71
CCNC-204ENST00000482541 PDGFDQ9GZP0 370 aaPredicted RBP10.62□□□□□ -0.71
CCNC-204ENST00000482541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.62□□□□□ -0.715e-8■□□□□ 9.6
CCNC-204ENST00000482541 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.62□□□□□ -0.71
CCNC-204ENST00000482541 NCAPD2Q15021 1401 aa10.62□□□□□ -0.71
CCNC-204ENST00000482541 SPG7Q9UQ90 795 aa10.61□□□□□ -0.71
CCNC-204ENST00000482541 KNSTRNQ9Y448 316 aa10.61□□□□□ -0.71
CCNC-204ENST00000482541 DOT1LQ8TEK3 1739 aa10.61□□□□□ -0.71
CCNC-204ENST00000482541 CYP27B1O15528 508 aa10.61□□□□□ -0.71
CCNC-204ENST00000482541 TNNT2P45379 298 aaPredicted RBP10.61□□□□□ -0.71
CCNC-204ENST00000482541 NKX1-1Q15270 411 aaPredicted RBP10.61□□□□□ -0.71
CCNC-204ENST00000482541 MTFR1LQ9H019 292 aa10.61□□□□□ -0.71
CCNC-204ENST00000482541 PAPPAQ13219 1627 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms