RNA–Protein interactions for RNA: ENST00000482396.5

SFMBT1-204, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 2

Gene SFMBT1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-204ENST00000482396 PKD1L3Q7Z443 1732 aa27.14■■□□□ 1.94
SFMBT1-204ENST00000482396 KCNQ2O43526 872 aa27.14■■□□□ 1.94
SFMBT1-204ENST00000482396 EIF4A2Q14240 407 aaKnown RBP27.13■■□□□ 1.93
SFMBT1-204ENST00000482396 EYA1Q99502 592 aa27.13■■□□□ 1.93
SFMBT1-204ENST00000482396 BTAF1O14981 1849 aa27.13■■□□□ 1.93
SFMBT1-204ENST00000482396 PARD3Q8TEW0 1356 aa27.12■■□□□ 1.93
SFMBT1-204ENST00000482396 ZCRB1Q8TBF4 217 aaKnown RBP27.12■■□□□ 1.93
SFMBT1-204ENST00000482396 NPC1L1Q9UHC9 1359 aa27.11■■□□□ 1.93
SFMBT1-204ENST00000482396 DDX54Q8TDD1 881 aaKnown RBP27.11■■□□□ 1.93
SFMBT1-204ENST00000482396 DOT1LQ8TEK3 1739 aa27.1■■□□□ 1.93
SFMBT1-204ENST00000482396 PLSCR1O15162 318 aa27.09■■□□□ 1.93
SFMBT1-204ENST00000482396 ACSBG1Q96GR2 724 aa27.09■■□□□ 1.93
SFMBT1-204ENST00000482396 CC2D1BQ5T0F9 858 aaKnown RBP27.08■■□□□ 1.93
SFMBT1-204ENST00000482396 RAPGEF4Q8WZA2 1011 aa27.08■■□□□ 1.93
SFMBT1-204ENST00000482396 TATP17735 454 aaPredicted RBP27.07■■□□□ 1.92
SFMBT1-204ENST00000482396 PROM2Q8N271 834 aa27.07■■□□□ 1.92
SFMBT1-204ENST00000482396 IGSF1Q8N6C5 1336 aa27.05■■□□□ 1.92
SFMBT1-204ENST00000482396 TOGARAM1Q9Y4F4 1720 aa27.03■■□□□ 1.92
SFMBT1-204ENST00000482396 CYP27B1O15528 508 aa27.02■■□□□ 1.92
SFMBT1-204ENST00000482396 MTHFSP49914 203 aa27.01■■□□□ 1.91
SFMBT1-204ENST00000482396 ITGB4P16144 1822 aa27.01■■□□□ 1.91
SFMBT1-204ENST00000482396 PSDA5PKW4 1024 aaPredicted RBP27■■□□□ 1.91
SFMBT1-204ENST00000482396 IL13P35225 146 aa27■■□□□ 1.91
SFMBT1-204ENST00000482396 PCDH11XQ9BZA7 1347 aa26.98■■□□□ 1.91
SFMBT1-204ENST00000482396 PCDH11YQ9BZA8 1340 aa26.98■■□□□ 1.91
SFMBT1-204ENST00000482396 SRCAPQ6ZRS2 3230 aa26.97■■□□□ 1.91
SFMBT1-204ENST00000482396 LY75O60449 1722 aa26.97■■□□□ 1.91
SFMBT1-204ENST00000482396 PRIM1P49642 420 aaKnown RBP26.97■■□□□ 1.91
SFMBT1-204ENST00000482396 R3HDM1Q15032 1099 aaKnown RBP26.97■■□□□ 1.91
SFMBT1-204ENST00000482396 CNGB1Q14028 1251 aaPredicted RBP26.96■■□□□ 1.91
SFMBT1-204ENST00000482396 TXNRD1Q16881 649 aa26.96■■□□□ 1.91
SFMBT1-204ENST00000482396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.96■■□□□ 1.91
SFMBT1-204ENST00000482396 COL3A1P02461 1466 aaPredicted RBP26.95■■□□□ 1.91
SFMBT1-204ENST00000482396 AEBP1Q8IUX7 1158 aa26.95■■□□□ 1.9
SFMBT1-204ENST00000482396 PLEKHG2Q9H7P9 1386 aa26.94■■□□□ 1.9
SFMBT1-204ENST00000482396 PAPPAQ13219 1627 aa26.94■■□□□ 1.9
SFMBT1-204ENST00000482396 NKX1-1Q15270 411 aaPredicted RBP26.93■■□□□ 1.9
SFMBT1-204ENST00000482396 ANO8Q9HCE9 1232 aaPredicted RBP26.93■■□□□ 1.9
SFMBT1-204ENST00000482396 KDRP35968 1356 aa26.93■■□□□ 1.9
SFMBT1-204ENST00000482396 SPG7Q9UQ90 795 aa26.92■■□□□ 1.9
SFMBT1-204ENST00000482396 SYTL4Q96C24 671 aaPredicted RBP26.9■■□□□ 1.9
SFMBT1-204ENST00000482396 LRP5O75197 1615 aa26.88■■□□□ 1.89
SFMBT1-204ENST00000482396 PHKG2P15735 406 aa26.88■■□□□ 1.89
SFMBT1-204ENST00000482396 SULT6B1Q6IMI4 303 aa26.88■■□□□ 1.89
SFMBT1-204ENST00000482396 LRRC4BQ9NT99 713 aa26.88■■□□□ 1.89
SFMBT1-204ENST00000482396 CASZ1Q86V15 1759 aa26.87■■□□□ 1.89
SFMBT1-204ENST00000482396 NBPF14Q5TI25 921 aa26.87■■□□□ 1.89
SFMBT1-204ENST00000482396 IFNL2Q8IZJ0 200 aa26.85■■□□□ 1.89
SFMBT1-204ENST00000482396 DIAPH1O60610 1272 aaKnown RBP26.84■■□□□ 1.89
SFMBT1-204ENST00000482396 VIRMAQ69YN4 1812 aaKnown RBP26.83■■□□□ 1.89
SFMBT1-204ENST00000482396 PPP2R1AP30153 589 aa26.83■■□□□ 1.89
SFMBT1-204ENST00000482396 PLEKHO1Q53GL0 409 aaPredicted RBP26.82■■□□□ 1.88
SFMBT1-204ENST00000482396 TAF1LQ8IZX4 1826 aa26.81■■□□□ 1.88
SFMBT1-204ENST00000482396 TUBGCP6Q96RT7 1819 aa26.81■■□□□ 1.88
SFMBT1-204ENST00000482396 HMOX1P09601 288 aa26.8■■□□□ 1.88
SFMBT1-204ENST00000482396 KCNQ4P56696 695 aa26.8■■□□□ 1.88
SFMBT1-204ENST00000482396 SLC15A2Q16348 729 aa26.8■■□□□ 1.88
SFMBT1-204ENST00000482396 MPRIPQ6WCQ1 1025 aa26.8■■□□□ 1.88
SFMBT1-204ENST00000482396 PIGBQ92521 554 aa26.8■■□□□ 1.88
SFMBT1-204ENST00000482396 PDGFDQ9GZP0 370 aaPredicted RBP26.8■■□□□ 1.88
SFMBT1-204ENST00000482396 KDM6AO15550 1401 aaPredicted RBP26.8■■□□□ 1.88
SFMBT1-204ENST00000482396 SCN11AQ9UI33 1791 aa26.79■■□□□ 1.88
SFMBT1-204ENST00000482396 AMOTQ4VCS5 1084 aa26.79■■□□□ 1.88
SFMBT1-204ENST00000482396 QSER1Q2KHR3 1735 aa26.79■■□□□ 1.88
SFMBT1-204ENST00000482396 SLC27A3Q5K4L6 730 aa26.78■■□□□ 1.88
SFMBT1-204ENST00000482396 ZEB1P37275 1124 aaPredicted RBP26.77■■□□□ 1.88
SFMBT1-204ENST00000482396 ZNF827Q17R98 1081 aa26.77■■□□□ 1.88
SFMBT1-204ENST00000482396 ZNF530Q6P9A1 599 aaPredicted RBP26.77■■□□□ 1.88
SFMBT1-204ENST00000482396 DDX10Q13206 875 aaKnown RBP26.76■■□□□ 1.87
SFMBT1-204ENST00000482396 C5P01031 1676 aa26.76■■□□□ 1.87
SFMBT1-204ENST00000482396 AKT1S1Q96B36 256 aa26.75■■□□□ 1.87
SFMBT1-204ENST00000482396 STK32BQ9NY57 414 aa26.75■■□□□ 1.87
SFMBT1-204ENST00000482396 PALLDQ8WX93 1383 aa26.73■■□□□ 1.87
SFMBT1-204ENST00000482396 DCAF5Q96JK2 942 aa26.73■■□□□ 1.87
SFMBT1-204ENST00000482396 ADAMTS7Q9UKP4 1686 aa26.73■■□□□ 1.87
SFMBT1-204ENST00000482396 CCNL1Q9UK58 526 aaPredicted RBP26.72■■□□□ 1.87
SFMBT1-204ENST00000482396 ERVV-2B6SEH9 535 aa26.71■■□□□ 1.87
SFMBT1-204ENST00000482396 HSP90AB1P08238 724 aaKnown RBP26.71■■□□□ 1.87
SFMBT1-204ENST00000482396 TMOD3Q9NYL9 352 aa26.71■■□□□ 1.87
SFMBT1-204ENST00000482396 U2SURPO15042 1029 aaKnown RBP26.7■■□□□ 1.86
SFMBT1-204ENST00000482396 ASAP1Q9ULH1 1129 aa26.7■■□□□ 1.86
SFMBT1-204ENST00000482396 MTHFSDQ2M296 383 aaKnown RBP26.69■■□□□ 1.86
SFMBT1-204ENST00000482396 CFAP53Q96M91 514 aa26.68■■□□□ 1.86
SFMBT1-204ENST00000482396 ATG3Q9NT62 314 aa26.68■■□□□ 1.86
SFMBT1-204ENST00000482396 AKAP4Q5JQC9 854 aa26.67■■□□□ 1.86
SFMBT1-204ENST00000482396 C1orf141Q5JVX7 400 aa26.67■■□□□ 1.86
SFMBT1-204ENST00000482396 SMARCC1Q92922 1105 aaPredicted RBP26.67■■□□□ 1.86
SFMBT1-204ENST00000482396 RSPH6AQ9H0K4 717 aa26.66■■□□□ 1.86
SFMBT1-204ENST00000482396 ZNF831Q5JPB2 1677 aa26.66■■□□□ 1.86
SFMBT1-204ENST00000482396 C4BP0C0L5 1744 aa26.65■■□□□ 1.86
SFMBT1-204ENST00000482396 COL24A1Q17RW2 1714 aa26.65■■□□□ 1.86
SFMBT1-204ENST00000482396 LGR6Q9HBX8 967 aa26.65■■□□□ 1.86
SFMBT1-204ENST00000482396 UBR3Q6ZT12 1888 aa26.64■■□□□ 1.85
SFMBT1-204ENST00000482396 PNPLA7Q6ZV29 1317 aa26.64■■□□□ 1.85
SFMBT1-204ENST00000482396 MRC1P22897 1456 aa26.62■■□□□ 1.85
SFMBT1-204ENST00000482396 LOC102724428A0A0B4J2F2 783 aa26.62■■□□□ 1.85
SFMBT1-204ENST00000482396 ZBTB7AO95365 584 aa26.62■■□□□ 1.85
SFMBT1-204ENST00000482396 SIK1P57059 783 aa26.62■■□□□ 1.85
SFMBT1-204ENST00000482396 PHACTR3Q96KR7 559 aa26.62■■□□□ 1.85
SFMBT1-204ENST00000482396 SLC4A9Q96Q91 983 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms