RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 PLEKHM2Q8IWE5 1019 aa19.06■□□□□ 0.64
C9orf3-218ENST00000482056 FMN2Q9NZ56 1722 aa19.05■□□□□ 0.64
C9orf3-218ENST00000482056 K7ELQ4 463 aaPredicted RBP19.05■□□□□ 0.64
C9orf3-218ENST00000482056 MCM10Q7L590 875 aa19.05■□□□□ 0.64
C9orf3-218ENST00000482056 TTC22Q5TAA0 569 aa19.04■□□□□ 0.64
C9orf3-218ENST00000482056 RTF1Q92541 710 aaKnown RBP19.04■□□□□ 0.64
C9orf3-218ENST00000482056 KIF2CQ99661 725 aa19.04■□□□□ 0.64
C9orf3-218ENST00000482056 RGS12O14924 1447 aa19.04■□□□□ 0.64
C9orf3-218ENST00000482056 HSP90AB2PQ58FF8 381 aa19.04■□□□□ 0.64
C9orf3-218ENST00000482056 CASC1Q6TDU7 716 aa19.04■□□□□ 0.64
C9orf3-218ENST00000482056 EID1Q9Y6B2 187 aa19.04■□□□□ 0.64
C9orf3-218ENST00000482056 ATP10DQ9P241 1426 aa19.03■□□□□ 0.64
C9orf3-218ENST00000482056 CRB1P82279 1406 aa19.03■□□□□ 0.64
C9orf3-218ENST00000482056 HMMRO75330 724 aa19.02■□□□□ 0.64
C9orf3-218ENST00000482056 FSD2A1L4K1 749 aa19.02■□□□□ 0.64
C9orf3-218ENST00000482056 GSPT1P15170 499 aaKnown RBP19.02■□□□□ 0.64
C9orf3-218ENST00000482056 CEP85Q6P2H3 762 aa19.02■□□□□ 0.64
C9orf3-218ENST00000482056 ISY1Q9ULR0 285 aaKnown RBP19.02■□□□□ 0.64
C9orf3-218ENST00000482056 FLT4P35916 1363 aa19.02■□□□□ 0.64
C9orf3-218ENST00000482056 MSH6P52701 1360 aa19.02■□□□□ 0.64
C9orf3-218ENST00000482056 SSH2Q76I76 1423 aa19.02■□□□□ 0.63
C9orf3-218ENST00000482056 SBNO1A3KN83 1393 aa19.01■□□□□ 0.63
C9orf3-218ENST00000482056 RTL1A6NKG5 1358 aa19.01■□□□□ 0.63
C9orf3-218ENST00000482056 RAB3GAP1Q15042 981 aa19.01■□□□□ 0.63
C9orf3-218ENST00000482056 SKOR2Q2VWA4 1001 aaPredicted RBP19.01■□□□□ 0.63
C9orf3-218ENST00000482056 GZF1Q9H116 711 aaPredicted RBP19.01■□□□□ 0.63
C9orf3-218ENST00000482056 NUTM2FA1L443 756 aa19.01■□□□□ 0.63
C9orf3-218ENST00000482056 RABEP1Q15276 862 aa19.01■□□□□ 0.63
C9orf3-218ENST00000482056 KRT24Q2M2I5 525 aa19.01■□□□□ 0.63
C9orf3-218ENST00000482056 TNPO1Q92973 898 aaKnown RBP19.01■□□□□ 0.63
C9orf3-218ENST00000482056 LTKP29376 864 aa19■□□□□ 0.63
C9orf3-218ENST00000482056 SLC4A2P04920 1241 aa18.99■□□□□ 0.63
C9orf3-218ENST00000482056 GAS2L2Q8NHY3 880 aa18.99■□□□□ 0.63
C9orf3-218ENST00000482056 TSPYL4Q9UJ04 414 aa18.99■□□□□ 0.63
C9orf3-218ENST00000482056 CCT4P50991 539 aaKnown RBP18.99■□□□□ 0.63
C9orf3-218ENST00000482056 MAP3K19Q56UN5 1328 aa18.98■□□□□ 0.63
C9orf3-218ENST00000482056 SOX12O15370 315 aa18.98■□□□□ 0.63
C9orf3-218ENST00000482056 MRE11P49959 708 aa18.98■□□□□ 0.63
C9orf3-218ENST00000482056 PTPRUQ92729 1446 aa18.97■□□□□ 0.63
C9orf3-218ENST00000482056 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
C9orf3-218ENST00000482056 KDRP35968 1356 aa18.97■□□□□ 0.63
C9orf3-218ENST00000482056 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
C9orf3-218ENST00000482056 AMPHP49418 695 aa18.97■□□□□ 0.63
C9orf3-218ENST00000482056 MEIS3Q99687 375 aa18.97■□□□□ 0.63
C9orf3-218ENST00000482056 AMOTL2Q9Y2J4 779 aa18.97■□□□□ 0.63
C9orf3-218ENST00000482056 GOLGA6L22H0YM25 854 aa18.96■□□□□ 0.63
C9orf3-218ENST00000482056 XRCC6P12956 609 aaKnown RBP eCLIP18.96■□□□□ 0.63
C9orf3-218ENST00000482056 MTHFSDQ2M296 383 aaKnown RBP18.96■□□□□ 0.63
C9orf3-218ENST00000482056 SLC26A8Q96RN1 970 aa18.96■□□□□ 0.63
C9orf3-218ENST00000482056 STK31Q9BXU1 1019 aa18.96■□□□□ 0.63
C9orf3-218ENST00000482056 RIMS1Q86UR5 1692 aaKnown RBP18.96■□□□□ 0.63
C9orf3-218ENST00000482056 TBX22Q9Y458 520 aa18.95■□□□□ 0.62
C9orf3-218ENST00000482056 SLIT1O75093 1534 aa18.95■□□□□ 0.62
C9orf3-218ENST00000482056 DIP2AQ14689 1571 aa18.95■□□□□ 0.62
C9orf3-218ENST00000482056 CD2BP2O95400 341 aaKnown RBP18.95■□□□□ 0.62
C9orf3-218ENST00000482056 C16orf71Q8IYS4 520 aaPredicted RBP18.95■□□□□ 0.62
C9orf3-218ENST00000482056 REC8O95072 547 aa18.94■□□□□ 0.62
C9orf3-218ENST00000482056 RBM42Q9BTD8 480 aaKnown RBP18.94■□□□□ 0.62
C9orf3-218ENST00000482056 USP26Q9BXU7 913 aa18.94■□□□□ 0.62
C9orf3-218ENST00000482056 IGSF1Q8N6C5 1336 aa18.94■□□□□ 0.62
C9orf3-218ENST00000482056 ARXQ96QS3 562 aa18.93■□□□□ 0.62
C9orf3-218ENST00000482056 ARHGAP23Q9P227 1491 aa18.93■□□□□ 0.62
C9orf3-218ENST00000482056 SDSP20132 328 aa18.93■□□□□ 0.62
C9orf3-218ENST00000482056 SLC4A10Q6U841 1118 aa18.93■□□□□ 0.62
C9orf3-218ENST00000482056 SOS1Q07889 1333 aaPredicted RBP18.92■□□□□ 0.62
C9orf3-218ENST00000482056 FOXD4L1Q9NU39 408 aa18.92■□□□□ 0.62
C9orf3-218ENST00000482056 MIS18AQ9NYP9 233 aa18.92■□□□□ 0.62
C9orf3-218ENST00000482056 APBB1O00213 710 aa18.92■□□□□ 0.62
C9orf3-218ENST00000482056 FOXO3O43524 673 aa18.92■□□□□ 0.62
C9orf3-218ENST00000482056 GNAI2P04899 355 aa18.92■□□□□ 0.62
C9orf3-218ENST00000482056 SMARCA5O60264 1052 aaPredicted RBP18.91■□□□□ 0.62
C9orf3-218ENST00000482056 ST18O60284 1047 aa18.91■□□□□ 0.62
C9orf3-218ENST00000482056 CCDC30Q5VVM6 783 aa18.91■□□□□ 0.62
C9orf3-218ENST00000482056 EYA1Q99502 592 aa18.91■□□□□ 0.62
C9orf3-218ENST00000482056 PIK3C2AO00443 1686 aa18.9■□□□□ 0.62
C9orf3-218ENST00000482056 CACNA1FO60840 1977 aa18.9■□□□□ 0.62
C9orf3-218ENST00000482056 LRRC37A3O60309 1634 aa18.9■□□□□ 0.62
C9orf3-218ENST00000482056 CLEC17AQ6ZS10 378 aa18.9■□□□□ 0.62
C9orf3-218ENST00000482056 OTUD7AQ8TE49 926 aaPredicted RBP18.9■□□□□ 0.62
C9orf3-218ENST00000482056 RGPD8O14715 1765 aaPredicted RBP18.9■□□□□ 0.62
C9orf3-218ENST00000482056 ANKARQ7Z5J8 1434 aa18.9■□□□□ 0.62
C9orf3-218ENST00000482056 GNAI3P08754 354 aa18.9■□□□□ 0.62
C9orf3-218ENST00000482056 NUCB2P80303 420 aa18.9■□□□□ 0.62
C9orf3-218ENST00000482056 OSBPL3Q9H4L5 887 aa18.9■□□□□ 0.62
C9orf3-218ENST00000482056 GRPEL1Q9HAV7 217 aa18.9■□□□□ 0.62
C9orf3-218ENST00000482056 CEP170BQ9Y4F5 1589 aaPredicted RBP18.89■□□□□ 0.61
C9orf3-218ENST00000482056 GNAT3A8MTJ3 354 aa18.89■□□□□ 0.61
C9orf3-218ENST00000482056 ERC2O15083 957 aa18.88■□□□□ 0.61
C9orf3-218ENST00000482056 G2E3Q7L622 706 aa18.88■□□□□ 0.61
C9orf3-218ENST00000482056 CWC22Q9HCG8 908 aaKnown RBP18.88■□□□□ 0.61
C9orf3-218ENST00000482056 FAM208AQ9UK61 1670 aaKnown RBP18.88■□□□□ 0.61
C9orf3-218ENST00000482056 NLRP6P59044 892 aa18.88■□□□□ 0.61
C9orf3-218ENST00000482056 THEMISQ8N1K5 641 aaPredicted RBP18.88■□□□□ 0.61
C9orf3-218ENST00000482056 BABAM1Q9NWV8 329 aa18.88■□□□□ 0.61
C9orf3-218ENST00000482056 F6X3S4 739 aa18.87■□□□□ 0.61
C9orf3-218ENST00000482056 SSFA2P28290 1259 aa18.87■□□□□ 0.61
C9orf3-218ENST00000482056 CEBPAP49715 358 aaPredicted RBP18.86■□□□□ 0.61
C9orf3-218ENST00000482056 USP54Q70EL1 1684 aa18.86■□□□□ 0.61
C9orf3-218ENST00000482056 XRN1Q8IZH2 1706 aaKnown RBP18.86■□□□□ 0.61
C9orf3-218ENST00000482056 PDE1AP54750 535 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms