RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 INO80Q9ULG1 1556 aaPredicted RBP10.23□□□□□ -0.77
CTNNB1-213ENST00000482042 SH3D19Q5HYK7 790 aa10.23□□□□□ -0.77
CTNNB1-213ENST00000482042 SNIP1Q8TAD8 396 aaKnown RBP10.23□□□□□ -0.77
CTNNB1-213ENST00000482042 CCDC141Q6ZP82 1450 aa10.22□□□□□ -0.77
CTNNB1-213ENST00000482042 NUTM2BA6NNL0 878 aaPredicted RBP10.22□□□□□ -0.77
CTNNB1-213ENST00000482042 NUTM2EB1AL46 878 aaPredicted RBP10.22□□□□□ -0.77
CTNNB1-213ENST00000482042 AVPP01185 164 aa10.22□□□□□ -0.77
CTNNB1-213ENST00000482042 NUTM2DQ5VT03 806 aaPredicted RBP10.22□□□□□ -0.77
CTNNB1-213ENST00000482042 NUTM2AQ8IVF1 878 aaPredicted RBP10.22□□□□□ -0.77
CTNNB1-213ENST00000482042 ZNF777Q9ULD5 760 aaPredicted RBP10.22□□□□□ -0.77
CTNNB1-213ENST00000482042 ARHGEF40Q8TER5 1519 aa10.22□□□□□ -0.77
CTNNB1-213ENST00000482042 ZFYVE16Q7Z3T8 1539 aa10.21□□□□□ -0.77
CTNNB1-213ENST00000482042 PLEKHG3A1L390 1219 aa10.21□□□□□ -0.78
CTNNB1-213ENST00000482042 TTC24A2A3L6 582 aaPredicted RBP10.21□□□□□ -0.78
CTNNB1-213ENST00000482042 F12P00748 615 aaPredicted RBP10.21□□□□□ -0.78
CTNNB1-213ENST00000482042 POLR3EQ9NVU0 708 aa10.21□□□□□ -0.78
CTNNB1-213ENST00000482042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.21□□□□□ -0.78
CTNNB1-213ENST00000482042 MLH3Q9UHC1 1453 aa10.2□□□□□ -0.78
CTNNB1-213ENST00000482042 ATP7AQ04656 1500 aa10.2□□□□□ -0.78
CTNNB1-213ENST00000482042 PLXNC1O60486 1568 aa10.2□□□□□ -0.78
CTNNB1-213ENST00000482042 REREQ9P2R6 1566 aa10.2□□□□□ -0.78
CTNNB1-213ENST00000482042 SH3BP2P78314 561 aa10.2□□□□□ -0.78
CTNNB1-213ENST00000482042 SKIV2LQ15477 1246 aaKnown RBP10.2□□□□□ -0.78
CTNNB1-213ENST00000482042 CRIPAKQ8N1N5 446 aa10.2□□□□□ -0.78
CTNNB1-213ENST00000482042 COL17A1Q9UMD9 1497 aaPredicted RBP10.2□□□□□ -0.78
CTNNB1-213ENST00000482042 SHANK2Q9UPX8 1470 aa10.2□□□□□ -0.78
CTNNB1-213ENST00000482042 ABCA6Q8N139 1617 aa10.19□□□□□ -0.78
CTNNB1-213ENST00000482042 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
CTNNB1-213ENST00000482042 RTEL1-TNFRSF6BF6WH68 1400 aa10.19□□□□□ -0.78
CTNNB1-213ENST00000482042 MBD5Q9P267 1494 aa10.19□□□□□ -0.78
CTNNB1-213ENST00000482042 ARHGEF12Q9NZN5 1544 aa10.19□□□□□ -0.78
CTNNB1-213ENST00000482042 PER1O15534 1290 aaPredicted RBP10.18□□□□□ -0.78
CTNNB1-213ENST00000482042 SMPD1P17405 629 aa10.18□□□□□ -0.78
CTNNB1-213ENST00000482042 HELBQ8NG08 1087 aaPredicted RBP10.18□□□□□ -0.78
CTNNB1-213ENST00000482042 RRBP1Q9P2E9 1410 aaKnown RBP10.18□□□□□ -0.78
CTNNB1-213ENST00000482042 DIP2CQ9Y2E4 1556 aa10.18□□□□□ -0.78
CTNNB1-213ENST00000482042 BCORL1Q5H9F3 1711 aa10.18□□□□□ -0.78
CTNNB1-213ENST00000482042 TSPY4P0CV99 314 aa10.17□□□□□ -0.78
CTNNB1-213ENST00000482042 TSPY10P0CW01 314 aa10.17□□□□□ -0.78
CTNNB1-213ENST00000482042 CTHP32929 405 aa10.17□□□□□ -0.78
CTNNB1-213ENST00000482042 ZNF511Q8NB15 262 aa10.17□□□□□ -0.78
CTNNB1-213ENST00000482042 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.17□□□□□ -0.78
CTNNB1-213ENST00000482042 AAASQ9NRG9 546 aa10.17□□□□□ -0.78
CTNNB1-213ENST00000482042 MAP10Q9P2G4 905 aa10.17□□□□□ -0.78
CTNNB1-213ENST00000482042 EIF2AK4Q9P2K8 1649 aaKnown RBP10.17□□□□□ -0.78
CTNNB1-213ENST00000482042 TRAPPC8Q9Y2L5 1435 aa10.16□□□□□ -0.78
CTNNB1-213ENST00000482042 SIAH2O43255 324 aa10.16□□□□□ -0.78
CTNNB1-213ENST00000482042 SMCPP49901 116 aaPredicted RBP10.16□□□□□ -0.78
CTNNB1-213ENST00000482042 HNRNPMP52272 730 aaKnown RBP eCLIP10.16□□□□□ -0.78
CTNNB1-213ENST00000482042 CTC1Q2NKJ3 1217 aa10.16□□□□□ -0.78
CTNNB1-213ENST00000482042 EHBP1Q8NDI1 1231 aa10.16□□□□□ -0.78
CTNNB1-213ENST00000482042 BAP1Q92560 729 aa10.16□□□□□ -0.78
CTNNB1-213ENST00000482042 DAPK1P53355 1430 aa10.16□□□□□ -0.78
CTNNB1-213ENST00000482042 J3QL48 77 aa10.15□□□□□ -0.78
CTNNB1-213ENST00000482042 ST8SIA5O15466 376 aa10.15□□□□□ -0.78
CTNNB1-213ENST00000482042 RAPGEF3O95398 923 aa10.15□□□□□ -0.78
CTNNB1-213ENST00000482042 LINC01559Q495D7 138 aa10.15□□□□□ -0.78
CTNNB1-213ENST00000482042 TSC1Q92574 1164 aa10.15□□□□□ -0.78
CTNNB1-213ENST00000482042 GCC2Q8IWJ2 1684 aa10.15□□□□□ -0.78
CTNNB1-213ENST00000482042 SPAG9O60271 1321 aaKnown RBP10.15□□□□□ -0.79
CTNNB1-213ENST00000482042 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
CTNNB1-213ENST00000482042 ATP10AO60312 1499 aa10.14□□□□□ -0.79
CTNNB1-213ENST00000482042 C9orf84Q5VXU9 1444 aa10.14□□□□□ -0.79
CTNNB1-213ENST00000482042 FER1L4A9Z1Z3 1794 aa10.14□□□□□ -0.79
CTNNB1-213ENST00000482042 ZNF644Q9H582 1327 aaPredicted RBP10.14□□□□□ -0.79
CTNNB1-213ENST00000482042 FAM50AQ14320 339 aaKnown RBP10.14□□□□□ -0.79
CTNNB1-213ENST00000482042 PPP2R2DQ66LE6 453 aa10.14□□□□□ -0.79
CTNNB1-213ENST00000482042 NEUROD2Q15784 382 aa10.13□□□□□ -0.79
CTNNB1-213ENST00000482042 FBXO31Q5XUX0 539 aaPredicted RBP10.13□□□□□ -0.79
CTNNB1-213ENST00000482042 AFAP1Q8N556 730 aa10.13□□□□□ -0.79
CTNNB1-213ENST00000482042 PROCA1Q8NCQ7 364 aaPredicted RBP10.13□□□□□ -0.79
CTNNB1-213ENST00000482042 DUOX2Q9NRD8 1548 aa10.12□□□□□ -0.79
CTNNB1-213ENST00000482042 ADGRL2O95490 1459 aa10.12□□□□□ -0.79
CTNNB1-213ENST00000482042 AGLP35573 1532 aa10.12□□□□□ -0.79
CTNNB1-213ENST00000482042 AXIN1O15169 862 aa10.12□□□□□ -0.79
CTNNB1-213ENST00000482042 ZNF787Q6DD87 383 aa10.12□□□□□ -0.79
CTNNB1-213ENST00000482042 GOPCQ9HD26 462 aa10.12□□□□□ -0.79
CTNNB1-213ENST00000482042 ZC3H13Q5T200 1668 aaKnown RBP10.11□□□□□ -0.79
CTNNB1-213ENST00000482042 ABCC5O15440 1437 aa10.11□□□□□ -0.79
CTNNB1-213ENST00000482042 A2MP01023 1474 aa10.11□□□□□ -0.79
CTNNB1-213ENST00000482042 ALDH1A1P00352 501 aa10.11□□□□□ -0.79
CTNNB1-213ENST00000482042 VARSP26640 1264 aaKnown RBP10.11□□□□□ -0.79
CTNNB1-213ENST00000482042 ANKRD30AQ9BXX3 1397 aa10.1□□□□□ -0.79
CTNNB1-213ENST00000482042 SIGLEC1Q9BZZ2 1709 aa10.1□□□□□ -0.79
CTNNB1-213ENST00000482042 MROH2AA6NES4 1674 aa10.1□□□□□ -0.79
CTNNB1-213ENST00000482042 BRPF1P55201 1214 aaPredicted RBP10.1□□□□□ -0.79
CTNNB1-213ENST00000482042 TPRNQ4KMQ1 711 aa10.1□□□□□ -0.79
CTNNB1-213ENST00000482042 MPNDQ8N594 471 aa10.1□□□□□ -0.79
CTNNB1-213ENST00000482042 YEATS2Q9ULM3 1422 aa10.1□□□□□ -0.79
CTNNB1-213ENST00000482042 FAM135AQ9P2D6 1515 aa10.09□□□□□ -0.79
CTNNB1-213ENST00000482042 RNF17Q9BXT8 1623 aaKnown RBP10.09□□□□□ -0.79
CTNNB1-213ENST00000482042 ARMC2Q8NEN0 867 aa10.09□□□□□ -0.79
CTNNB1-213ENST00000482042 HPS1Q92902 700 aa10.09□□□□□ -0.79
CTNNB1-213ENST00000482042 ADAMTSL3P82987 1691 aa10.09□□□□□ -0.79
CTNNB1-213ENST00000482042 ROCK1Q13464 1354 aa10.09□□□□□ -0.79
CTNNB1-213ENST00000482042 DEPDC5O75140 1603 aa10.08□□□□□ -0.8
CTNNB1-213ENST00000482042 ERBINQ96RT1 1412 aa10.08□□□□□ -0.8
CTNNB1-213ENST00000482042 CTDSPL2Q05D32 466 aa10.08□□□□□ -0.8
CTNNB1-213ENST00000482042 FOXJ1Q92949 421 aa10.07□□□□□ -0.8
CTNNB1-213ENST00000482042 DACH1Q9UI36 760 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms