RNA–Protein interactions for RNA: ENST00000482019.1

LINC02004-201, Transcript of long intergenic non-protein coding RNA 2004, humanhuman

TSL 2 BASIC

Gene LINC02004, Length 294 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02004-201ENST00000482019 AMER1Q5JTC6 1135 aaPredicted RBP14.08□□□□□ -0.16
LINC02004-201ENST00000482019 DDX54Q8TDD1 881 aaKnown RBP14.08□□□□□ -0.16
LINC02004-201ENST00000482019 SHANK3Q9BYB0 1731 aa14.07□□□□□ -0.16
LINC02004-201ENST00000482019 PTF1AQ7RTS3 328 aa14.07□□□□□ -0.16
LINC02004-201ENST00000482019 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
LINC02004-201ENST00000482019 ACSBG1Q96GR2 724 aa14.06□□□□□ -0.16
LINC02004-201ENST00000482019 KCNQ2O43526 872 aa14.05□□□□□ -0.16
LINC02004-201ENST00000482019 EIF4A2Q14240 407 aaKnown RBP14.05□□□□□ -0.16
LINC02004-201ENST00000482019 NBPF14Q5TI25 921 aa14.05□□□□□ -0.16
LINC02004-201ENST00000482019 EYA1Q99502 592 aa14.05□□□□□ -0.16
LINC02004-201ENST00000482019 PCDH11XQ9BZA7 1347 aa14.05□□□□□ -0.16
LINC02004-201ENST00000482019 PCDH11YQ9BZA8 1340 aa14.05□□□□□ -0.16
LINC02004-201ENST00000482019 PLEKHG2Q9H7P9 1386 aa14.05□□□□□ -0.16
LINC02004-201ENST00000482019 NPC1L1Q9UHC9 1359 aa14.05□□□□□ -0.16
LINC02004-201ENST00000482019 PSDA5PKW4 1024 aaPredicted RBP14.04□□□□□ -0.16
LINC02004-201ENST00000482019 R3HDM1Q15032 1099 aaKnown RBP14.04□□□□□ -0.16
LINC02004-201ENST00000482019 PKD1L3Q7Z443 1732 aa14.04□□□□□ -0.16
LINC02004-201ENST00000482019 DOT1LQ8TEK3 1739 aa14.03□□□□□ -0.16
LINC02004-201ENST00000482019 BTAF1O14981 1849 aa14.02□□□□□ -0.16
LINC02004-201ENST00000482019 IGSF1Q8N6C5 1336 aa14.02□□□□□ -0.17
LINC02004-201ENST00000482019 TXNRD1Q16881 649 aa14.02□□□□□ -0.17
LINC02004-201ENST00000482019 LRP5O75197 1615 aa14.01□□□□□ -0.17
LINC02004-201ENST00000482019 CC2D1BQ5T0F9 858 aaKnown RBP14.01□□□□□ -0.17
LINC02004-201ENST00000482019 PROM2Q8N271 834 aa14.01□□□□□ -0.17
LINC02004-201ENST00000482019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC02004-201ENST00000482019 SPG7Q9UQ90 795 aa14.01□□□□□ -0.17
LINC02004-201ENST00000482019 PRIM1P49642 420 aaKnown RBP14□□□□□ -0.17
LINC02004-201ENST00000482019 SYTL4Q96C24 671 aaPredicted RBP14□□□□□ -0.17
LINC02004-201ENST00000482019 CYP27B1O15528 508 aa13.99□□□□□ -0.17
LINC02004-201ENST00000482019 MTHFSP49914 203 aa13.98□□□□□ -0.17
LINC02004-201ENST00000482019 NKX1-1Q15270 411 aaPredicted RBP13.97□□□□□ -0.17
LINC02004-201ENST00000482019 ANO8Q9HCE9 1232 aaPredicted RBP13.97□□□□□ -0.17
LINC02004-201ENST00000482019 PAPPAQ13219 1627 aa13.97□□□□□ -0.17
LINC02004-201ENST00000482019 IL13P35225 146 aa13.96□□□□□ -0.17
LINC02004-201ENST00000482019 SLC27A3Q5K4L6 730 aa13.96□□□□□ -0.17
LINC02004-201ENST00000482019 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.17
LINC02004-201ENST00000482019 STK32BQ9NY57 414 aa13.96□□□□□ -0.17
LINC02004-201ENST00000482019 KDRP35968 1356 aa13.96□□□□□ -0.18
LINC02004-201ENST00000482019 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
LINC02004-201ENST00000482019 PHKG2P15735 406 aa13.95□□□□□ -0.18
LINC02004-201ENST00000482019 LY75O60449 1722 aa13.95□□□□□ -0.18
LINC02004-201ENST00000482019 SLC15A2Q16348 729 aa13.94□□□□□ -0.18
LINC02004-201ENST00000482019 AMOTQ4VCS5 1084 aa13.94□□□□□ -0.18
LINC02004-201ENST00000482019 PLEKHO1Q53GL0 409 aaPredicted RBP13.94□□□□□ -0.18
LINC02004-201ENST00000482019 DIAPH1O60610 1272 aaKnown RBP13.93□□□□□ -0.18
LINC02004-201ENST00000482019 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
LINC02004-201ENST00000482019 SULT6B1Q6IMI4 303 aa13.93□□□□□ -0.18
LINC02004-201ENST00000482019 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
LINC02004-201ENST00000482019 LRRC4BQ9NT99 713 aa13.93□□□□□ -0.18
LINC02004-201ENST00000482019 CASZ1Q86V15 1759 aa13.93□□□□□ -0.18
LINC02004-201ENST00000482019 HSP90AB1P08238 724 aaKnown RBP13.92□□□□□ -0.18
LINC02004-201ENST00000482019 MPRIPQ6WCQ1 1025 aa13.92□□□□□ -0.18
LINC02004-201ENST00000482019 COL3A1P02461 1466 aaPredicted RBP13.92□□□□□ -0.18
LINC02004-201ENST00000482019 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
LINC02004-201ENST00000482019 PALLDQ8WX93 1383 aa13.91□□□□□ -0.18
LINC02004-201ENST00000482019 ZNF530Q6P9A1 599 aaPredicted RBP13.9□□□□□ -0.18
LINC02004-201ENST00000482019 SMARCC1Q92922 1105 aaPredicted RBP13.9□□□□□ -0.18
LINC02004-201ENST00000482019 SPON1Q9HCB6 807 aa13.9□□□□□ -0.18
LINC02004-201ENST00000482019 TMOD3Q9NYL9 352 aa13.9□□□□□ -0.18
LINC02004-201ENST00000482019 CCNL1Q9UK58 526 aaPredicted RBP13.9□□□□□ -0.18
LINC02004-201ENST00000482019 ITGB4P16144 1822 aa13.9□□□□□ -0.18
LINC02004-201ENST00000482019 ZNF827Q17R98 1081 aa13.89□□□□□ -0.19
LINC02004-201ENST00000482019 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
LINC02004-201ENST00000482019 PIGBQ92521 554 aa13.89□□□□□ -0.19
LINC02004-201ENST00000482019 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
LINC02004-201ENST00000482019 DCAF5Q96JK2 942 aa13.89□□□□□ -0.19
LINC02004-201ENST00000482019 CFAP53Q96M91 514 aa13.89□□□□□ -0.19
LINC02004-201ENST00000482019 KAT6BQ8WYB5 2073 aa13.89□□□□□ -0.19
LINC02004-201ENST00000482019 ERVV-2B6SEH9 535 aa13.88□□□□□ -0.19
LINC02004-201ENST00000482019 SRCAPQ6ZRS2 3230 aa13.88□□□□□ -0.19
LINC02004-201ENST00000482019 QSER1Q2KHR3 1735 aa13.87□□□□□ -0.19
LINC02004-201ENST00000482019 HMOX1P09601 288 aa13.87□□□□□ -0.19
LINC02004-201ENST00000482019 PPP2R1AP30153 589 aa13.87□□□□□ -0.19
LINC02004-201ENST00000482019 PDGFDQ9GZP0 370 aaPredicted RBP13.87□□□□□ -0.19
LINC02004-201ENST00000482019 KDM6AO15550 1401 aaPredicted RBP13.87□□□□□ -0.19
LINC02004-201ENST00000482019 C5P01031 1676 aa13.86□□□□□ -0.19
LINC02004-201ENST00000482019 ZEB1P37275 1124 aaPredicted RBP13.86□□□□□ -0.19
LINC02004-201ENST00000482019 KCNQ4P56696 695 aa13.86□□□□□ -0.19
LINC02004-201ENST00000482019 U2SURPO15042 1029 aaKnown RBP13.85□□□□□ -0.19
LINC02004-201ENST00000482019 ZBTB7AO95365 584 aa13.85□□□□□ -0.19
LINC02004-201ENST00000482019 AKAP4Q5JQC9 854 aa13.85□□□□□ -0.19
LINC02004-201ENST00000482019 MTFR1LQ9H019 292 aa13.85□□□□□ -0.19
LINC02004-201ENST00000482019 TFCP2L1Q9NZI6 479 aa13.85□□□□□ -0.19
LINC02004-201ENST00000482019 CABP4P57796 275 aa13.84□□□□□ -0.19
LINC02004-201ENST00000482019 PPP1R1BQ9UD71 204 aaPredicted RBP13.84□□□□□ -0.19
LINC02004-201ENST00000482019 NUDCQ9Y266 331 aa13.84□□□□□ -0.19
LINC02004-201ENST00000482019 LOC102724428A0A0B4J2F2 783 aa13.83□□□□□ -0.2
LINC02004-201ENST00000482019 SIK1P57059 783 aa13.83□□□□□ -0.2
LINC02004-201ENST00000482019 SLC16A10Q8TF71 515 aa13.83□□□□□ -0.2
LINC02004-201ENST00000482019 ATG3Q9NT62 314 aa13.83□□□□□ -0.2
LINC02004-201ENST00000482019 ASAP1Q9ULH1 1129 aa13.83□□□□□ -0.2
LINC02004-201ENST00000482019 PNPLA7Q6ZV29 1317 aa13.83□□□□□ -0.2
LINC02004-201ENST00000482019 C4BP0C0L5 1744 aa13.82□□□□□ -0.2
LINC02004-201ENST00000482019 TAF1LQ8IZX4 1826 aa13.82□□□□□ -0.2
LINC02004-201ENST00000482019 TUBGCP6Q96RT7 1819 aa13.82□□□□□ -0.2
LINC02004-201ENST00000482019 ZNF831Q5JPB2 1677 aa13.82□□□□□ -0.2
LINC02004-201ENST00000482019 SCN11AQ9UI33 1791 aa13.81□□□□□ -0.2
LINC02004-201ENST00000482019 PTGER2P43116 358 aa13.81□□□□□ -0.2
LINC02004-201ENST00000482019 MTHFSDQ2M296 383 aaKnown RBP13.81□□□□□ -0.2
LINC02004-201ENST00000482019 ATF5Q9Y2D1 282 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms