RNA–Protein interactions for RNA: ENST00000481559.6

GRIA1-205, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIA1, Length 2,069 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-205ENST00000481559 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
GRIA1-205ENST00000481559 CCDC9Q9Y3X0 531 aaKnown RBP13.62□□□□□ -0.23
GRIA1-205ENST00000481559 FBXO41Q8TF61 875 aa13.62□□□□□ -0.23
GRIA1-205ENST00000481559 LGR6Q9HBX8 967 aa13.62□□□□□ -0.23
GRIA1-205ENST00000481559 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
GRIA1-205ENST00000481559 AFF2P51816 1311 aa13.61□□□□□ -0.23
GRIA1-205ENST00000481559 TSR2Q969E8 191 aaKnown RBP13.61□□□□□ -0.23
GRIA1-205ENST00000481559 CARD10Q9BWT7 1032 aa13.61□□□□□ -0.23
GRIA1-205ENST00000481559 MPRIPQ6WCQ1 1025 aa13.6□□□□□ -0.23
GRIA1-205ENST00000481559 USP21Q9UK80 565 aa13.6□□□□□ -0.23
GRIA1-205ENST00000481559 UNC5CLQ8IV45 518 aa13.6□□□□□ -0.23
GRIA1-205ENST00000481559 FNBP4Q8N3X1 1017 aaPredicted RBP13.6□□□□□ -0.23
GRIA1-205ENST00000481559 RAPGEF4Q8WZA2 1011 aa13.6□□□□□ -0.23
GRIA1-205ENST00000481559 LAS1LQ9Y4W2 734 aaKnown RBP13.6□□□□□ -0.23
GRIA1-205ENST00000481559 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
GRIA1-205ENST00000481559 CYP27B1O15528 508 aa13.59□□□□□ -0.23
GRIA1-205ENST00000481559 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
GRIA1-205ENST00000481559 IL17REQ8NFR9 667 aa13.59□□□□□ -0.23
GRIA1-205ENST00000481559 SPATA31A1Q5TZJ5 1347 aa13.59□□□□□ -0.23
GRIA1-205ENST00000481559 TATP17735 454 aaPredicted RBP13.58□□□□□ -0.24
GRIA1-205ENST00000481559 FAM98CQ17RN3 349 aaKnown RBP13.58□□□□□ -0.24
GRIA1-205ENST00000481559 DDX54Q8TDD1 881 aaKnown RBP13.58□□□□□ -0.24
GRIA1-205ENST00000481559 NWD2Q9ULI1 1742 aa13.58□□□□□ -0.24
GRIA1-205ENST00000481559 SPATA31A5Q5VU36 1347 aa13.58□□□□□ -0.24
GRIA1-205ENST00000481559 SPATA31A7Q8IWB4 1347 aa13.58□□□□□ -0.24
GRIA1-205ENST00000481559 NEFMP07197 916 aa13.57□□□□□ -0.24
GRIA1-205ENST00000481559 IL2RBP14784 551 aa13.57□□□□□ -0.24
GRIA1-205ENST00000481559 FAM182BQ5T319 152 aa13.57□□□□□ -0.24
GRIA1-205ENST00000481559 OVOS2A0A0G2JMS6 1433 aa13.57□□□□□ -0.24
GRIA1-205ENST00000481559 GOLGA2Q08379 1002 aa13.57□□□□□ -0.24
GRIA1-205ENST00000481559 SLFN5Q08AF3 891 aa13.57□□□□□ -0.24
GRIA1-205ENST00000481559 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
GRIA1-205ENST00000481559 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
GRIA1-205ENST00000481559 DISP2A7MBM2 1401 aa13.56□□□□□ -0.24
GRIA1-205ENST00000481559 PNNQ9H307 717 aaKnown RBP13.56□□□□□ -0.24
GRIA1-205ENST00000481559 VIRMAQ69YN4 1812 aaKnown RBP13.56□□□□□ -0.24
GRIA1-205ENST00000481559 PLEKHO1Q53GL0 409 aaPredicted RBP13.55□□□□□ -0.24
GRIA1-205ENST00000481559 MAP3K5Q99683 1374 aa13.55□□□□□ -0.24
GRIA1-205ENST00000481559 PKD1L3Q7Z443 1732 aa13.55□□□□□ -0.24
GRIA1-205ENST00000481559 KDM6AO15550 1401 aaPredicted RBP13.55□□□□□ -0.24
GRIA1-205ENST00000481559 GLI3P10071 1580 aa13.55□□□□□ -0.24
GRIA1-205ENST00000481559 GNAT3A8MTJ3 354 aa13.55□□□□□ -0.24
GRIA1-205ENST00000481559 PHKG2P15735 406 aa13.55□□□□□ -0.24
GRIA1-205ENST00000481559 CCDC27Q2M243 656 aa13.55□□□□□ -0.24
GRIA1-205ENST00000481559 GAS2L2Q8NHY3 880 aa13.55□□□□□ -0.24
GRIA1-205ENST00000481559 WNK3Q9BYP7 1800 aa13.55□□□□□ -0.24
GRIA1-205ENST00000481559 PARP4Q9UKK3 1724 aaKnown RBP13.54□□□□□ -0.24
GRIA1-205ENST00000481559 KCNQ3O43525 872 aa13.54□□□□□ -0.24
GRIA1-205ENST00000481559 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
GRIA1-205ENST00000481559 RGS17Q9UGC6 210 aaPredicted RBP13.54□□□□□ -0.24
GRIA1-205ENST00000481559 FANCIQ9NVI1 1328 aa13.53□□□□□ -0.24
GRIA1-205ENST00000481559 ELL2O00472 640 aaPredicted RBP13.53□□□□□ -0.24
GRIA1-205ENST00000481559 VPS72Q15906 364 aa13.53□□□□□ -0.24
GRIA1-205ENST00000481559 AKAP4Q5JQC9 854 aa13.52□□□□□ -0.24
GRIA1-205ENST00000481559 ILDR1Q86SU0 546 aaPredicted RBP13.52□□□□□ -0.24
GRIA1-205ENST00000481559 TRMT2AQ8IZ69 625 aaKnown RBP13.52□□□□□ -0.24
GRIA1-205ENST00000481559 MBIPQ9NS73 344 aa13.52□□□□□ -0.24
GRIA1-205ENST00000481559 LRRC37A3O60309 1634 aa13.52□□□□□ -0.25
GRIA1-205ENST00000481559 A0A0G2JS52 829 aa13.52□□□□□ -0.25
GRIA1-205ENST00000481559 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
GRIA1-205ENST00000481559 TSPYL6Q8N831 410 aa13.52□□□□□ -0.25
GRIA1-205ENST00000481559 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
GRIA1-205ENST00000481559 C1orf141Q5JVX7 400 aa13.51□□□□□ -0.25
GRIA1-205ENST00000481559 WDR63Q8IWG1 891 aa13.51□□□□□ -0.25
GRIA1-205ENST00000481559 RTF1Q92541 710 aaKnown RBP13.51□□□□□ -0.25
GRIA1-205ENST00000481559 QTRT2Q9H974 415 aaKnown RBP13.51□□□□□ -0.25
GRIA1-205ENST00000481559 TOGARAM1Q9Y4F4 1720 aa13.51□□□□□ -0.25
GRIA1-205ENST00000481559 TCERG1O14776 1098 aaKnown RBP13.51□□□□□ -0.25
GRIA1-205ENST00000481559 EXOSC9Q06265 439 aaKnown RBP13.51□□□□□ -0.25
GRIA1-205ENST00000481559 GJD4Q96KN9 370 aaPredicted RBP13.51□□□□□ -0.25
GRIA1-205ENST00000481559 SPG7Q9UQ90 795 aa13.51□□□□□ -0.25
GRIA1-205ENST00000481559 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.5□□□□□ -0.25
GRIA1-205ENST00000481559 ZNF853P0CG23 659 aa13.5□□□□□ -0.25
GRIA1-205ENST00000481559 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
GRIA1-205ENST00000481559 PTF1AQ7RTS3 328 aa13.5□□□□□ -0.25
GRIA1-205ENST00000481559 MARCH10Q8NA82 808 aaPredicted RBP13.5□□□□□ -0.25
GRIA1-205ENST00000481559 CEMIPQ8WUJ3 1361 aa13.5□□□□□ -0.25
GRIA1-205ENST00000481559 ATRNO75882 1429 aa13.5□□□□□ -0.25
GRIA1-205ENST00000481559 KAT6BQ8WYB5 2073 aa13.49□□□□□ -0.25
GRIA1-205ENST00000481559 E9PSI1 815 aa13.49□□□□□ -0.25
GRIA1-205ENST00000481559 IRX6P78412 446 aaPredicted RBP13.49□□□□□ -0.25
GRIA1-205ENST00000481559 IFNL2Q8IZJ0 200 aa13.49□□□□□ -0.25
GRIA1-205ENST00000481559 NFATC2IPQ8NCF5 419 aa13.49□□□□□ -0.25
GRIA1-205ENST00000481559 BCL2L13Q9BXK5 485 aa13.49□□□□□ -0.25
GRIA1-205ENST00000481559 SUPT16HQ9Y5B9 1047 aaKnown RBP13.49□□□□□ -0.25
GRIA1-205ENST00000481559 C8orf58Q8NAV2 365 aa13.49□□□□□ -0.25
GRIA1-205ENST00000481559 ACSBG1Q96GR2 724 aa13.49□□□□□ -0.25
GRIA1-205ENST00000481559 SCN11AQ9UI33 1791 aa13.48□□□□□ -0.25
GRIA1-205ENST00000481559 PRAMEF22A3QJZ6 481 aa13.48□□□□□ -0.25
GRIA1-205ENST00000481559 DDB1Q16531 1140 aa13.48□□□□□ -0.25
GRIA1-205ENST00000481559 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
GRIA1-205ENST00000481559 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
GRIA1-205ENST00000481559 EXOC5O00471 708 aa13.48□□□□□ -0.25
GRIA1-205ENST00000481559 POTEAQ6S8J7 498 aa13.48□□□□□ -0.25
GRIA1-205ENST00000481559 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
GRIA1-205ENST00000481559 PLIN1O60240 522 aa13.47□□□□□ -0.25
GRIA1-205ENST00000481559 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
GRIA1-205ENST00000481559 BARGINQ6ZT62 677 aa13.47□□□□□ -0.25
GRIA1-205ENST00000481559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.25
GRIA1-205ENST00000481559 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms