RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 DCCP43146 1447 aa23.46■■□□□ 1.35
MRPL28-209ENST00000481453 NCOA3Q9Y6Q9 1424 aa23.46■■□□□ 1.35
MRPL28-209ENST00000481453 C8orf34Q49A92 452 aa23.46■■□□□ 1.35
MRPL28-209ENST00000481453 CHL1O00533 1208 aa23.45■■□□□ 1.35
MRPL28-209ENST00000481453 KDM4FA0A1W2PPD8 638 aa23.45■■□□□ 1.34
MRPL28-209ENST00000481453 MRPL50Q8N5N7 158 aaKnown RBP23.45■■□□□ 1.34
MRPL28-209ENST00000481453 KCNH5Q8NCM2 988 aa23.45■■□□□ 1.34
MRPL28-209ENST00000481453 LMTK3Q96Q04 1460 aa23.44■■□□□ 1.34
MRPL28-209ENST00000481453 TWISTNBQ3B726 338 aaPredicted RBP23.44■■□□□ 1.34
MRPL28-209ENST00000481453 LRRC37A3O60309 1634 aa23.44■■□□□ 1.34
MRPL28-209ENST00000481453 LTV1Q96GA3 475 aaPredicted RBP23.44■■□□□ 1.34
MRPL28-209ENST00000481453 ALS2Q96Q42 1657 aa23.43■■□□□ 1.34
MRPL28-209ENST00000481453 ELL2O00472 640 aaPredicted RBP23.43■■□□□ 1.34
MRPL28-209ENST00000481453 USP19O94966 1318 aa23.43■■□□□ 1.34
MRPL28-209ENST00000481453 IPO8O15397 1037 aaKnown RBP23.43■■□□□ 1.34
MRPL28-209ENST00000481453 KRT28Q7Z3Y7 464 aa23.43■■□□□ 1.34
MRPL28-209ENST00000481453 STRCQ7RTU9 1775 aa23.42■■□□□ 1.34
MRPL28-209ENST00000481453 TMEM57Q8N5G2 664 aa23.41■■□□□ 1.34
MRPL28-209ENST00000481453 GAS2L2Q8NHY3 880 aa23.41■■□□□ 1.34
MRPL28-209ENST00000481453 USP35Q9P2H5 1018 aa23.41■■□□□ 1.34
MRPL28-209ENST00000481453 XIRP1Q702N8 1843 aaKnown RBP23.4■■□□□ 1.34
MRPL28-209ENST00000481453 GCP02774 474 aa23.4■■□□□ 1.34
MRPL28-209ENST00000481453 ATF3P18847 181 aa23.4■■□□□ 1.34
MRPL28-209ENST00000481453 MSH6P52701 1360 aa23.4■■□□□ 1.34
MRPL28-209ENST00000481453 RGPD2P0DJD1 1756 aa23.39■■□□□ 1.34
MRPL28-209ENST00000481453 ARHGEF25Q86VW2 580 aa23.39■■□□□ 1.34
MRPL28-209ENST00000481453 KRT24Q2M2I5 525 aa23.39■■□□□ 1.33
MRPL28-209ENST00000481453 ITPRIPQ8IWB1 547 aa23.39■■□□□ 1.33
MRPL28-209ENST00000481453 USHBP1Q8N6Y0 703 aa23.39■■□□□ 1.33
MRPL28-209ENST00000481453 DAXXQ9UER7 740 aaPredicted RBP23.39■■□□□ 1.33
MRPL28-209ENST00000481453 DDX19BQ9UMR2 479 aa23.39■■□□□ 1.33
MRPL28-209ENST00000481453 KIAA0232Q92628 1395 aa23.39■■□□□ 1.33
MRPL28-209ENST00000481453 ARHGAP45Q92619 1136 aa23.38■■□□□ 1.33
MRPL28-209ENST00000481453 NBPF6Q5VWK0 638 aa23.37■■□□□ 1.33
MRPL28-209ENST00000481453 NBPF4Q96M43 638 aa23.37■■□□□ 1.33
MRPL28-209ENST00000481453 MED1Q15648 1581 aaPredicted RBP23.37■■□□□ 1.33
MRPL28-209ENST00000481453 HTATSF1O43719 755 aaKnown RBP23.36■■□□□ 1.33
MRPL28-209ENST00000481453 RTF1Q92541 710 aaKnown RBP23.36■■□□□ 1.33
MRPL28-209ENST00000481453 LMOD2Q6P5Q4 547 aa23.35■■□□□ 1.33
MRPL28-209ENST00000481453 ZBTB7CA1YPR0 619 aa23.34■■□□□ 1.33
MRPL28-209ENST00000481453 SLC4A3P48751 1232 aa23.34■■□□□ 1.33
MRPL28-209ENST00000481453 ZBTB40Q9NUA8 1239 aa23.34■■□□□ 1.33
MRPL28-209ENST00000481453 NCAPD2Q15021 1401 aa23.34■■□□□ 1.33
MRPL28-209ENST00000481453 MAP3K5Q99683 1374 aa23.34■■□□□ 1.33
MRPL28-209ENST00000481453 DDX17Q92841 729 aaKnown RBP23.33■■□□□ 1.33
MRPL28-209ENST00000481453 MIS18AQ9NYP9 233 aa23.33■■□□□ 1.33
MRPL28-209ENST00000481453 ABCC4O15439 1325 aa23.33■■□□□ 1.33
MRPL28-209ENST00000481453 GNAT3A8MTJ3 354 aa23.33■■□□□ 1.33
MRPL28-209ENST00000481453 CADPS2Q86UW7 1296 aa23.33■■□□□ 1.33
MRPL28-209ENST00000481453 CAMTA1Q9Y6Y1 1673 aa23.33■■□□□ 1.32
MRPL28-209ENST00000481453 PLEKHG5O94827 1062 aa23.32■■□□□ 1.32
MRPL28-209ENST00000481453 RWDD1Q9H446 243 aaPredicted RBP23.32■■□□□ 1.32
MRPL28-209ENST00000481453 LRRC59Q96AG4 307 aaKnown RBP23.31■■□□□ 1.32
MRPL28-209ENST00000481453 TSPYL4Q9UJ04 414 aa23.31■■□□□ 1.32
MRPL28-209ENST00000481453 IL17REQ8NFR9 667 aa23.3■■□□□ 1.32
MRPL28-209ENST00000481453 PXDNQ92626 1479 aa23.29■■□□□ 1.32
MRPL28-209ENST00000481453 RGPD5Q99666 1765 aa23.29■■□□□ 1.32
MRPL28-209ENST00000481453 RGS12O14924 1447 aa23.28■■□□□ 1.32
MRPL28-209ENST00000481453 HDAC1Q13547 482 aaPredicted RBP23.28■■□□□ 1.32
MRPL28-209ENST00000481453 AXIN2Q9Y2T1 843 aa23.28■■□□□ 1.32
MRPL28-209ENST00000481453 HAP1P54257 671 aaPredicted RBP23.27■■□□□ 1.32
MRPL28-209ENST00000481453 ZBTB7BO15156 539 aaPredicted RBP23.27■■□□□ 1.31
MRPL28-209ENST00000481453 ANKRD24Q8TF21 1146 aa23.27■■□□□ 1.31
MRPL28-209ENST00000481453 API5Q9BZZ5 524 aaKnown RBP23.27■■□□□ 1.31
MRPL28-209ENST00000481453 NPHP3Q7Z494 1330 aa23.26■■□□□ 1.31
MRPL28-209ENST00000481453 LMO7Q8WWI1 1683 aa23.26■■□□□ 1.31
MRPL28-209ENST00000481453 CRYBG1Q9Y4K1 1723 aa23.26■■□□□ 1.31
MRPL28-209ENST00000481453 TNS3Q68CZ2 1445 aa23.26■■□□□ 1.31
MRPL28-209ENST00000481453 PDZRN3Q9UPQ7 1066 aa23.25■■□□□ 1.31
MRPL28-209ENST00000481453 CEMIPQ8WUJ3 1361 aa23.25■■□□□ 1.31
MRPL28-209ENST00000481453 COL18A1P39060 1754 aa23.24■■□□□ 1.31
MRPL28-209ENST00000481453 ZNF335Q9H4Z2 1342 aaPredicted RBP23.23■■□□□ 1.31
MRPL28-209ENST00000481453 ZC3H6P61129 1189 aaKnown RBP23.22■■□□□ 1.31
MRPL28-209ENST00000481453 NFKBIBQ15653 356 aa23.21■■□□□ 1.31
MRPL28-209ENST00000481453 BABAM1Q9NWV8 329 aa23.21■■□□□ 1.31
MRPL28-209ENST00000481453 FAM208AQ9UK61 1670 aaKnown RBP23.21■■□□□ 1.31
MRPL28-209ENST00000481453 TAF7Q15545 349 aaPredicted RBP23.21■■□□□ 1.31
MRPL28-209ENST00000481453 ERBB3P21860 1342 aa23.2■■□□□ 1.31
MRPL28-209ENST00000481453 SPATA31A3Q5VYP0 1347 aa23.2■■□□□ 1.31
MRPL28-209ENST00000481453 VIRMAQ69YN4 1812 aaKnown RBP23.2■■□□□ 1.3
MRPL28-209ENST00000481453 BRINP3Q76B58 766 aa23.2■■□□□ 1.3
MRPL28-209ENST00000481453 SMC5Q8IY18 1101 aa23.2■■□□□ 1.3
MRPL28-209ENST00000481453 PTPRCP08575 1304 aa23.19■■□□□ 1.3
MRPL28-209ENST00000481453 INTS3Q68E01 1043 aaKnown RBP23.18■■□□□ 1.3
MRPL28-209ENST00000481453 LGR6Q9HBX8 967 aa23.18■■□□□ 1.3
MRPL28-209ENST00000481453 CHMP4BQ9H444 224 aaKnown RBP23.18■■□□□ 1.3
MRPL28-209ENST00000481453 KDM3BQ7LBC6 1761 aa23.18■■□□□ 1.3
MRPL28-209ENST00000481453 SLC4A2P04920 1241 aa23.17■■□□□ 1.3
MRPL28-209ENST00000481453 PLEKHO1Q53GL0 409 aaPredicted RBP23.17■■□□□ 1.3
MRPL28-209ENST00000481453 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
MRPL28-209ENST00000481453 CABLES1Q8TDN4 633 aa23.17■■□□□ 1.3
MRPL28-209ENST00000481453 AKAP4Q5JQC9 854 aa23.17■■□□□ 1.3
MRPL28-209ENST00000481453 ABCC6O95255 1503 aa23.16■■□□□ 1.3
MRPL28-209ENST00000481453 SEC24BO95487 1268 aa23.16■■□□□ 1.3
MRPL28-209ENST00000481453 AMOTQ4VCS5 1084 aa23.16■■□□□ 1.3
MRPL28-209ENST00000481453 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
MRPL28-209ENST00000481453 G2E3Q7L622 706 aa23.16■■□□□ 1.3
MRPL28-209ENST00000481453 SOS1Q07889 1333 aaPredicted RBP23.14■■□□□ 1.3
MRPL28-209ENST00000481453 SIRT2Q8IXJ6 389 aa23.13■■□□□ 1.29
MRPL28-209ENST00000481453 OVOS2A0A0G2JMS6 1433 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms